Gchil7190.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7190.t1
Unique NameGchil7190.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length381
Homology
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A2V3J090_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J090_9FLOR)

HSP 1 Score: 366 bits (939), Expect = 9.340e-122
Identity = 173/243 (71.19%), Postives = 206/243 (84.77%), Query Frame = 0
Query:  133 VRRNVSHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGSSCILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            +R NVSHTRRCRAK+N+NF+RLL+VLP+PP GVE+KHKAQILQ AID+YRHV C+N +LEM LAL S S +HRWV+SV+  +P L+D+LKSFMAMICLT NWKYAELWSP T   SS + L Y +GA+PPTVEG  LHRL+ YR  SRKY FAPR GVPGRVFLTMRPEWL +L+DPVAF RAPHA+RN VEVTFAVP++VNGSV+MVV+F+DT RRDY+P TLNM NEI A+FGKAF+ + +
Sbjct:  136 LRPNVSHTRRCRAKLNTNFDRLLQVLPKPPPGVEVKHKAQILQYAIDHYRHVRCKNVKLEMTLALSSRSHMHRWVQSVVHTSPNLRDSLKSFMAMICLTKNWKYAELWSPHTPTDSSSVALTYASGALPPTVEGEELHRLKAYRVKSRKYTFAPRSGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNRVEVTFAVPVVVNGSVKMVVQFYDTYRRDYEPATLNMTNEIAAMFGKAFTAINS 378          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A7S1TET1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TET1_9RHOD)

HSP 1 Score: 179 bits (454), Expect = 9.700e-48
Identity = 99/244 (40.57%), Postives = 137/244 (56.15%), Query Frame = 0
Query:  138 SHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGS-SCIL--------LKYVTGAVPPTVEGNTL--HRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAF 370
            SHTRRCR KVN  F+ L+  LP PP G EIKHKAQIL  +I   + ++ R   LE +LAL +   +  WV+ V+  A    DA+  F+ M+C    WK AELW P   R   SC L        LK +  +    +E +    HR+  + D SR++ F P CG PGRV+ TMRPEWL  LSD   F RA  A + G+    ++P ++NG V+ VV  +D ++R+ D   L++A +I  + G AF
Sbjct:  269 SHTRRCREKVNEKFQTLMNELPPPPTGTEIKHKAQILDYSIRVLKDLASRKAALESELALSNRRNLLGWVDRVVNDAEDFPDAINPFLKMMCSKKAWKCAELWVPVEERVMVSCPLPQSETPTRLKLLRASFHENLEQDPPRHHRIHEFIDESRRFKFTPTCGSPGRVYSTMRPEWLHDLSDEQVFPRAELASKAGLVTCLSIPFLINGRVRGVVCLYDDEKRECDMGDLDLAFDIAILIGNAF 512          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A1X6PIG4_PORUM (BHLH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIG4_PORUM)

HSP 1 Score: 170 bits (430), Expect = 1.310e-43
Identity = 96/310 (30.97%), Postives = 148/310 (47.74%), Query Frame = 0
Query:  138 SHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRR--------------------GSSCILLKYVTGAVPPTV----------------------------------------------------EGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            SHTR+CRAKVN+ F+ LL +LP  P   ++KHKAQIL   I  Y+ +  R  QLE +LAL + + +  WV++V+  +  L +AL+ ++ +I +   ++YAELW PQ  +                    G S +L + +   +P  V                                                    E NT   +  +RD +      PR G+PGRV+ +MRPEWL +LSDP AF+RA +A  + + +  AVP+++ G V  V  FFDT +R YD   + +A+++  + G AF   +A
Sbjct:  345 SHTRKCRAKVNTKFDELLTLLPPHPDSFQVKHKAQILDYTIHMYKRIQARKNQLEAELALSTRANLAAWVDTVVASSRTLPEALRPYLHLIAVQKRFRYAELWLPQPTKAEGMAAAKKAGANASLSLPSGDSIVLTRSMALVLPAPVPTAGQTDELSVGLGAPTGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENTTRAIEAFRDATASCVVPPRVGMPGRVYCSMRPEWLPMLSDPHAFIRAEYAANSKLSMCLAVPVLLCGRVAAVAAFFDTGKRPYDASVVGLAHDVANLVGNAFGAAKA 654          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A2V3IV04_9FLOR (GAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV04_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 1.140e-41
Identity = 85/245 (34.69%), Postives = 134/245 (54.69%), Query Frame = 0
Query:  137 VSHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGS------SCILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            +SHT+ CR ++NS FERL   LP  P GVE+KHKAQ+L  AI   + +  R  QLE++LA+ S  A   W+  ++ +     +A +  M +      WK+AELW+   +  S      + + L++ +     T     L+ L+T+   S KY F  + GVPGRV+ +MRPEW+  L +   F R+  A ++G++V  AVP+ + G ++ V+ F+DT  R YD + L +A  +    G A    +A
Sbjct:  210 LSHTKMCRDRLNSMFERLKRTLPPAPSGVEVKHKAQVLDYAILVLKGMVERTTQLEIELAVSSNKATMEWISKLVDRVDTFPNAAEEVMQLFSRRRGWKHAELWTTSRKTASPEVDSDNSVTLRFCSSICSETTNERKLN-LQTFSKASEKYAFKAQHGVPGRVWSSMRPEWVTGLDNSKNFHRSSLAKKHGLKVCLAVPVTITGKIEAVMCFYDTKHRPYDTQCLELAMNLAWALGNAVGGKRA 453          
BLAST of Gchil7190.t1 vs. uniprot
Match: R7QKH2_CHOCR (GAF domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKH2_CHOCR)

HSP 1 Score: 151 bits (381), Expect = 8.810e-37
Identity = 84/246 (34.15%), Postives = 124/246 (50.41%), Query Frame = 0
Query:  137 VSHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELW-------SPQTRRGSSCILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            +SHT+ CR ++N+ FERL   LP  P GVE+KHKAQ+L  AI     +  R  QLE++LA+ S  A   W+  ++ +     +A +  M +     +WK+AELW        P      S IL   +  ++   V G     L  +   S  Y+F    GV GRV+  MRPEW+  L+DP  F R   A  +GV+V  AVP+ + G ++ V+ F+D   R YD +   +A  +    G A    +A
Sbjct:  422 LSHTKMCRDRLNNMFERLRHTLPPAPTGVEVKHKAQVLDYAIAVLHGMVDRTAQLEIELAVSSNKATMDWISKLVARTESFPEAAEEVMRLFARRRSWKHAELWVAGKRSMPPDANLEDSTILT--LCTSISNDVYGQGASSLDRFSKQSESYSFKANEGVQGRVWSAMRPEWVTGLTDPKNFKRCSLAREHGVKVCLAVPVTITGKIEAVMCFYDVKHRPYDTQCRELAMRLAWALGNAVGGKRA 665          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A2V3J1B9_9FLOR (GAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B9_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 1.100e-28
Identity = 82/260 (31.54%), Postives = 118/260 (45.38%), Query Frame = 0
Query:  138 SHTRRCRAKVNSNFERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSPSAIHRWVESVIRKA------------PVLKDALKSFMAMICLTNNWKYAELW--SPQTRRGS--SCILLKYVTGAVPPTVEGNTLHRLRTYRDFSR-KYNFAPRC--GVPGRVFLTMRPEWLA-VLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQAPC 377
            SHTRRCR KV   FE LLEVLP P  GVE++HKAQIL   I+ +R +  R   L   +AL S   + +W  S + +A            P +   L  FM   C+ N+W YAE W  +P T+  +  SC +          + + N    L  +   S+ +Y  A     GV  R   T RPEWL  +  D   F RA  A ++ V++  AVP++       V+ F  T  R +    ++       + G+ F +    C
Sbjct:  227 SHTRRCREKVTRQFEHLLEVLPPPSRGVEVRHKAQILDYTINVFRSLLARRTFLHTHIALASNHTLRQWANSTLLRASAAVKSDSFAQSPSIASLLHPFMRFYCVKNSWSYAETWILTPDTKHAALHSCFV---------NSDDSNVSKNLDAFATASKARYGAASEIVSGVVSRARQTKRPEWLVDIADDQCVFDRAALAAQHDVQIALAVPVVAENMCLAVIVFAHTTPRTFSAAEVDQLFGFAFILGQRFVQYSRGC 477          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A1X6NUF4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUF4_PORUM)

HSP 1 Score: 92.4 bits (228), Expect = 1.400e-16
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0
Query:  279 SRKYNFAPRCGVPGRVFLTMRPEWLAVLSDPVA-FLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAF 370
            SR + F P+ GVPGRV+ TMRPEWLA L+D    FLRAP A R G+ V  AVP+ V+GSV  VV F+DT  R +DP   ++A ++    G A+
Sbjct:  886 SRAWRFRPKVGVPGRVWSTMRPEWLASLADDRGTFLRAPLARRFGLRVCVAVPVTVSGSVAAVVAFYDTVARPFDPACYDLAVKLTCALGNAY 978          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A350XCG0_9CYAN (Adenylate/guanylate cyclase with GAF sensor(S) (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11372 TaxID=2055768 RepID=A0A350XCG0_9CYAN)

HSP 1 Score: 86.7 bits (213), Expect = 2.670e-15
Identity = 56/191 (29.32%), Postives = 82/191 (42.93%), Query Frame = 0
Query:  187 RNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGSSCILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLS--DPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            R  ++E++L L S  AIHR        AP L  A    + MIC +  W  AE W P         +L+   G             L  YR  S+   FAP  G+PGR++L+ RPEW+  LS  D   F+R+  A + G++  F VPI+    V  +  F+      Y  + + +   +    G      QA
Sbjct:  162 RQAEMEIRLLLASSHAIHR--------APDLHAAFNDILKMICQSLQWDLAETWIPNADE----TILECSEGCYLKDAS------LSDYRQKSKPLTFAPGEGIPGRIWLSKRPEWIENLSEIDKATFMRSEIAAKVGLKAAFGVPILAQDKVLAIWIFYQKQASAYQSRLVELVQAVATQLGAIVQRKQA 334          
BLAST of Gchil7190.t1 vs. uniprot
Match: A0A351LDX2_9CYAN (Adenylate/guanylate cyclase with GAF sensor(S) n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A351LDX2_9CYAN)

HSP 1 Score: 87.8 bits (216), Expect = 3.870e-15
Identity = 55/193 (28.50%), Postives = 84/193 (43.52%), Query Frame = 0
Query:  187 RNRQLEMQLALRSPSAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGSSCILLKYVTGAVPPTVEGNTLH--RLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWLAVLS--DPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQA 375
            R  ++E++L L +  AIHR        AP L  A    + MIC +  W  AE W P               G +  + EG  L       YR  S++  F P  G+PGR++L+ RPEW+  +S  D   F+R+  A R G++  F VPI+ +  V  +  F+      Y  + + +   +    G      QA
Sbjct:  158 RQAEMEIRLLLATSQAIHR--------APDLHAAFNDILKMICQSLQWDLAETWIPNA------------DGTILESSEGCYLKDATFSDYRQKSKRLTFVPGEGIPGRIWLSKRPEWIENISLVDGATFIRSEIAARAGLKAAFGVPILAHEKVLAIWIFYQKQASGYQSRMVELVQAVATQLGAIVQRKQA 330          
BLAST of Gchil7190.t1 vs. uniprot
Match: UPI001683F77F (diguanylate cyclase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI001683F77F)

HSP 1 Score: 86.7 bits (213), Expect = 7.380e-15
Identity = 50/204 (24.51%), Postives = 90/204 (44.12%), Query Frame = 0
Query:  181 YRHVSCRNRQLEMQLALRSPSAIHR----WVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGSSCILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRPEWL--AVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRDYDPKTLNMANEIGAVFGKAFSEMQAPCS 378
            Y  ++ +N  L+ Q+  R  +         +   I K+  L  AL+  +  +C T +W + E W P       C    Y T              L+ +R +S K  F P  G+PGRV+++ +PEW+    L     FLR+  A+  G++    VP++++  V  V+ FF T++R  + + + + N +    G      +A  +
Sbjct:  134 YNQLATQNAVLQQQIQERQRAEAETNLLLQITQAISKSSDLDSALEVTLQQVCETISWNFGEAWIPNDDGFLECSCGWYAT-----------TESLQEFRYYSEKLTFTPHTGLPGRVWMSQKPEWIENVSLEQNQLFLRSDIALEAGLKTALGVPLVLDDQVLAVLVFFKTEQRKPEERLIELVNAVATQLGSLIQRKKAEAA 326          
The following BLAST results are available for this feature:
BLAST of Gchil7190.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J090_9FLOR9.340e-12271.19BHLH domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S1TET1_9RHOD9.700e-4840.57Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6PIG4_PORUM1.310e-4330.97BHLH domain-containing protein n=1 Tax=Porphyra um... [more]
A0A2V3IV04_9FLOR1.140e-4134.69GAF domain-containing protein n=1 Tax=Gracilariops... [more]
R7QKH2_CHOCR8.810e-3734.15GAF domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3J1B9_9FLOR1.100e-2831.54GAF domain-containing protein n=1 Tax=Gracilariops... [more]
A0A1X6NUF4_PORUM1.400e-1650.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A350XCG0_9CYAN2.670e-1529.32Adenylate/guanylate cyclase with GAF sensor(S) (Fr... [more]
A0A351LDX2_9CYAN3.870e-1528.50Adenylate/guanylate cyclase with GAF sensor(S) n=2... [more]
UPI001683F77F7.380e-1524.51diguanylate cyclase n=1 Tax=Microcoleus sp. FACHB-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 204..375
e-value: 2.9E-7
score: 32.4
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 136..203
e-value: 7.7E-6
score: 27.9
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 136..195
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 131..184
score: 9.368773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:473245..474387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7190.t1Gchil7190.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 473245..474387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7190.t1 ID=Gchil7190.t1|Name=Gchil7190.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=381bp
MESSAQLVLNFPSQVVVFGDDNLPSERHPDILREPQEYKNELDLALQLED
SSGFLQEPHRLHVHALDVSSFQASDVTHSDQSRENTDIQRNLNVFVTAAD
GDSGSVDDTSARDVQNHASATDACSPTGVKAAVRRNVSHTRRCRAKVNSN
FERLLEVLPEPPLGVEIKHKAQILQRAIDYYRHVSCRNRQLEMQLALRSP
SAIHRWVESVIRKAPVLKDALKSFMAMICLTNNWKYAELWSPQTRRGSSC
ILLKYVTGAVPPTVEGNTLHRLRTYRDFSRKYNFAPRCGVPGRVFLTMRP
EWLAVLSDPVAFLRAPHAMRNGVEVTFAVPIIVNGSVQMVVEFFDTDRRD
YDPKTLNMANEIGAVFGKAFSEMQAPCSFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029016GAF-like_dom_sf
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom