Gchil7187.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7187.t1
Unique NameGchil7187.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length323
Homology
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A2V3INB0_9FLOR (Putative ribonuclease ZC3H12C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INB0_9FLOR)

HSP 1 Score: 332 bits (852), Expect = 2.090e-110
Identity = 186/322 (57.76%), Postives = 231/322 (71.74%), Query Frame = 0
Query:    3 ATNDAEDIELQKALQRSRKETNLEEAMLAEALAASLSTRDEEIARSMQREQFHILEKSLCDDNPSVVSDEDPSLSAPSVNGQSVAHGSLHASNVSSP--SHEPSSPDWTHLKSPNQFHHRRTPPTSSHRRSLQNETNFASASRAGAEFAPQRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTRFGLLNDRVADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPNPHELSRAGHCSRGVRYRR 322
            A +D +D ELQ+AL+RSR+ET LEE+MLA+ALAAS++TRDEE+ARS+Q+EQ  + E++LC ++ +  +   P    PS +   V       S+  S   + EP                 RT P S+ + +       +    +       R + ++S PVVVIDGQNVG SYGGGK+ FRAKGV+VVLDYY  KGMKAVAMLPA KVDTR G+ NDRVADDP LLK+LAAQ+LV+FTP+GSHDDHFLLAYAKQKNIDIISNDRF+KEVSEQ + +ASRALQ FL++HLIPYTFV+GEFMPNPNPH+LS A HCSRG R+RR
Sbjct:    2 AASDHDDCELQEALRRSREETTLEESMLAQALAASIATRDEELARSLQQEQLRLFEENLCSESCASNTPTTPQGGQPSASASEVLLNEAGPSSQESKRRNEEPHXXXXXXXXXXXXXXXXRTSPLSNAQSTQNKHLQPSPTLDSTTSNVHPRHNGNTSMPVVVIDGQNVGCSYGGGKNLFRAKGVQVVLDYYSGKGMKAVAMLPAHKVDTRPGIKNDRVADDPELLKNLAAQNLVSFTPSGSHDDHFLLAYAKQKNIDIISNDRFQKEVSEQASQAASRALQTFLDKHLIPYTFVDGEFMPNPNPHQLSLASHCSRGPRHRR 323          
BLAST of Gchil7187.t1 vs. uniprot
Match: R7Q260_CHOCR (RNase NYN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q260_CHOCR)

HSP 1 Score: 176 bits (446), Expect = 1.130e-46
Identity = 89/164 (54.27%), Postives = 110/164 (67.07%), Query Frame = 0
Query:  160 PVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTRF----GLLNDRVADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPNPHELSRAGHCSRGVR 319
            P V+IDGQNVG  YG   H F+++GVK+ LDYY   G++A+A+LP  KVD R     G+ N  VADDP LL  L +Q  V FTPAGSHDD F+L YA +K  D+ISNDRF KE+  QET    R ++ FL  HLIPYTF+  +F+PNPNP  L R  H SR +R
Sbjct:  472 PTVIIDGQNVGRDYGENDHIFQSRGVKLALDYYAANGIRALALLPRNKVDQRTYLRPGVRNTLVADDPELLNELHSQGRVYFTPAGSHDDFFILRYAMRKEADVISNDRFIKELEMQETAEDVRDMRTFLETHLIPYTFIGQDFVPNPNPCRLGRNVHQSRALR 635          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A0G4GLE2_9ALVE (RNase NYN domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GLE2_9ALVE)

HSP 1 Score: 100 bits (248), Expect = 1.450e-19
Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  161 VVVIDGQNVGYSYGG---GKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTRFGLLN-----DRVADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSE------QETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            +VVIDG NV   +GG   GK  F  +GV++ LDYYL +G +AVA +P   +  R           ++AD P LL+SL  Q LVA TP   +DD + + YA+  +  ++SND F+  V +      Q+   A    Q +++ H+I +TFV  EF+PNP+
Sbjct: 1032 LVVIDGCNVALRHGGVGIGKGFFSCEGVRLALDYYLQRGHRAVAFVPDYILKGRKDPAKPEKDPSKIADKPLLLESLVKQGLVALTPPQDYDDSYSIKYAQTHDGCVVSNDLFRDFVQKAGGTQGQQDKRARDRAQRWVSSHVISFTFVGDEFIPNPD 1189          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A151Z3Z9_9MYCE (RNase NYN domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3Z9_9MYCE)

HSP 1 Score: 99.0 bits (245), Expect = 3.250e-19
Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 0
Query:  161 VVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTR--------FGLLNDR-VADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            VVVIDG NV   YG  K  F    +K  LDYY  +G + VA +P   + T+        F L   R +ADD   L+ L   +LV+ TP   +DD + + YAK+ N  I++NDR+   + +QE     +  + F+ +H I +TFV GEF+PNP+
Sbjct:  729 VVVIDGPNVA-KYGTTK-KFSVSSLKKALDYYNQRGYEVVAFVPQSFISTKTSHEPKKNFTLFEYRDIADDLVGLQKLVEANLVSLTPPQDYDDSYAIHYAKKHNAVIVTNDRYNDHIEKQEESERPK-FRKFIRDHCISFTFVRGEFLPNPD 878          
BLAST of Gchil7187.t1 vs. uniprot
Match: C5KL87_PERM5 (RNase NYN domain-containing protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KL87_PERM5)

HSP 1 Score: 95.5 bits (236), Expect = 4.270e-18
Identity = 60/181 (33.15%), Postives = 94/181 (51.93%), Query Frame = 0
Query:  143 RAGAEFAPQRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTR--FGLLNDRV-----------------ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            R+ A    +R  ES   P+V+IDG NV   +GG    F  KG+++ +DYY+++G + +  LP   V+    F L N +                   D+  +L  L  Q  +A TP+  +DD + L YA +K+  I+SND ++  V +Q +   S ++  +L  H+I YTFV  EFMPNP+
Sbjct:  489 RSHAPGRHERPSESEYKPLVLIDGPNVANRHGG--QQFTCKGLQICVDYYISRGHEVMVFLPDYLVNRNELFKLRNAQKMRVQTVHGIKAAPTHIPVDNIGILLKLQTQGRLALTPSKDYDDSYCLQYAHRKDAVIVSNDMYRDWVKKQPSWKKSESIL-WLRTHVISYTFVKDEFMPNPD 666          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A7J6SE35_PEROL (RNase NYN domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SE35_PEROL)

HSP 1 Score: 94.0 bits (232), Expect = 6.870e-18
Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 0
Query:  126 SSHRRSLQNETNFASASRAGAEFAPQRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLP----------------ACKVDTRFGLLNDRV---ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            SS+  S    T+   + R G E    R+D     P+++IDG NV   +GG    F  KG+++ +DYY ++G + +  LP                  KV T  G+         D+  +L  L  Q  +A TP+  +DD + L YA +K+  I+SND ++  V +Q +   S ++Q +L  H++ YTFV  EFMPNP+
Sbjct:  215 SSNGDSANTHTSEVRSHRRGEEEKQPRTDYK---PLILIDGPNVANRHGG--QQFTCKGLQICVDYYTSRGHEVMVFLPDYLVNRNELFRLRNAQKMKVQTVHGIKAAPTHIPVDNIGILLKLQTQGRLALTPSKDYDDSYCLQYALKKDAVIVSNDMYRDWVKKQLSWKKSESIQ-WLRTHVVSYTFVKDEFMPNPD 406          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A7J6LWI2_PEROL (RRM domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LWI2_PEROL)

HSP 1 Score: 94.7 bits (234), Expect = 1.040e-17
Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 0
Query:  126 SSHRRSLQNETNFASASRAGAEFAPQRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLP----------------ACKVDTRFGLLNDRV---ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            SS+  S    T+   + R G E    R+D     P+++IDG NV   +GG    F  KG+++ +DYY ++G + +  LP                  KV T  G+         D+  +L  L  Q  +A TP+  +DD + L YA +K+  I+SND ++  V +Q +   S ++Q +L  H++ YTFV  EFMPNP+
Sbjct: 1785 SSNGDSANTHTSEVRSHRRGEEEKQPRTDYK---PLILIDGPNVANRHGG--QQFTCKGLQICVDYYTSRGHEVMVFLPDYLVNRNELFRLRNAQKMKVQTVHGIKAAPTHIPVDNIGILLKLQTQGRLALTPSKDYDDSYCLQYALKKDAVIVSNDMYRDWVKKQPSWKKSESIQ-WLRTHVVSYTFVKDEFMPNPD 1976          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A7J6S9L8_PEROL (RNase NYN domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6S9L8_PEROL)

HSP 1 Score: 92.4 bits (228), Expect = 4.640e-17
Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 0
Query:  133 QNETNFASASRAGAEFAPQRSDESSSAP------VVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLP----------------ACKVDTRFGLLNDRV---ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            +N +N  SA+   +E    R  E    P      +++IDG NV   +GG    F  KG+++ +DYY ++G + +  LP                  KV T  G+         D+  +L  L  Q  +A TP+  +DD + L YA +K+  I+SND ++  V +Q +   S ++Q +L  H++ YTFV  EFMPNP+
Sbjct:  469 ENSSNGDSANTHTSEVRSHRRSEEEKQPRTDYKPLILIDGPNVANRHGG--QQFTCKGLQICVDYYTSRGHEVMVFLPDYLVNRNELFRLRNAQKMKVQTVHGIKAAPTHIPVDNIGILLKLQTQGRLALTPSKDYDDSYCLQYALKKDAVIVSNDMYRDWVKKQPSWKKSGSIQ-WLRTHVVSYTFVKDEFMPNPD 662          
BLAST of Gchil7187.t1 vs. uniprot
Match: C5KHK3_PERM5 (RNase NYN domain-containing protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KHK3_PERM5)

HSP 1 Score: 92.4 bits (228), Expect = 5.230e-17
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 0
Query:  143 RAGAEFAPQRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLP----------------ACKVDTRFGLLNDRV---ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            R  A    + + E+   P+V+IDG NV   +GG    F  KG+++ +DYY+++G + +  LP                  +V T  G+         D+   L  L  Q  +A TP+  +DD + L YA +K+  I+SND ++  V +Q +     ++Q +L  H++ YTFV  EFMPNP+
Sbjct:  703 RCHAHGRDEMASEADYKPLVLIDGPNVANRHGG--QQFTCKGLQICVDYYVSRGHEVLVFLPDYLVNRNELFKLRNAQKMRVQTMHGIKAAPTHIPVDNIGFLLKLQTQGRLALTPSKDYDDSYCLQYAHKKDAVIVSNDMYRDWVKKQPSWRKGESIQ-WLRTHVVSYTFVRDEFMPNPD 880          
BLAST of Gchil7187.t1 vs. uniprot
Match: A0A7J6MT84_PERCH (RRM domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MT84_PERCH)

HSP 1 Score: 92.4 bits (228), Expect = 6.260e-17
Identity = 54/164 (32.93%), Postives = 88/164 (53.66%), Query Frame = 0
Query:  160 PVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAVAMLPACKVDTR--FGLLNDRV-----------------ADDPALLKSLAAQDLVAFTPAGSHDDHFLLAYAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFMPNPN 304
            P+V+IDG NV   +GG    F  KG+++ +DYY+++G + +  LP   VD    F L N +                   D+  +L  L  Q  +A TP+  +DD + L YA++K+  I+SND ++  V +Q +   + ++  +L  H++ YTFV  EFMPNP+
Sbjct: 1875 PLVLIDGPNVANRHGG--QQFTCKGLQICVDYYVSRGHEVMVFLPDYLVDRNELFKLRNAQKMKVQTLHGIKAAPTHIPVDNIGILLKLQTQGRLALTPSKDYDDSYCLQYARKKDGVIVSNDMYRDWVKKQPSWKKTESIH-WLRTHVVSYTFVKDEFMPNPD 2035          
The following BLAST results are available for this feature:
BLAST of Gchil7187.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INB0_9FLOR2.090e-11057.76Putative ribonuclease ZC3H12C n=1 Tax=Gracilariops... [more]
R7Q260_CHOCR1.130e-4654.27RNase NYN domain-containing protein n=1 Tax=Chondr... [more]
A0A0G4GLE2_9ALVE1.450e-1937.97RNase NYN domain-containing protein n=1 Tax=Chrome... [more]
A0A151Z3Z9_9MYCE3.250e-1937.91RNase NYN domain-containing protein n=1 Tax=Tieghe... [more]
C5KL87_PERM54.270e-1833.15RNase NYN domain-containing protein n=1 Tax=Perkin... [more]
A0A7J6SE35_PEROL6.870e-1831.82RNase NYN domain-containing protein n=1 Tax=Perkin... [more]
A0A7J6LWI2_PEROL1.040e-1731.82RRM domain-containing protein n=1 Tax=Perkinsus ol... [more]
A0A7J6S9L8_PEROL4.640e-1730.96RNase NYN domain-containing protein n=2 Tax=Perkin... [more]
C5KHK3_PERM55.230e-1730.94RNase NYN domain-containing protein n=1 Tax=Perkin... [more]
A0A7J6MT84_PERCH6.260e-1732.93RRM domain-containing protein n=1 Tax=Perkinsus ch... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 160..312
e-value: 1.1E-34
score: 121.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..112
NoneNo IPR availablePANTHERPTHR12876N4BP1-RELATEDcoord: 95..312
NoneNo IPR availablePANTHERPTHR12876:SF35LD08718Pcoord: 95..312
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 161..305
e-value: 2.3E-21
score: 76.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:457391..458359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7187.t1Gchil7187.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 457391..458359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7187.t1 ID=Gchil7187.t1|Name=Gchil7187.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=323bp
MTATNDAEDIELQKALQRSRKETNLEEAMLAEALAASLSTRDEEIARSMQ
REQFHILEKSLCDDNPSVVSDEDPSLSAPSVNGQSVAHGSLHASNVSSPS
HEPSSPDWTHLKSPNQFHHRRTPPTSSHRRSLQNETNFASASRAGAEFAP
QRSDESSSAPVVVIDGQNVGYSYGGGKHNFRAKGVKVVLDYYLNKGMKAV
AMLPACKVDTRFGLLNDRVADDPALLKSLAAQDLVAFTPAGSHDDHFLLA
YAKQKNIDIISNDRFKKEVSEQETGSASRALQDFLNEHLIPYTFVNGEFM
PNPNPHELSRAGHCSRGVRYRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN