Gchil7218.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7218.t1
Unique NameGchil7218.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length282
Homology
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A2V3INA6_9FLOR (DNA-binding protein BIN4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA6_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 1.020e-63
Identity = 131/280 (46.79%), Postives = 179/280 (63.93%), Query Frame = 0
Query:    1 MSFINSEDEFLSDSSGQLDLLSVKHNLQSVP--------DEILNQATTSRRASGKAHQTTNPEEPAWVLDHSQSRPTDRENRQRVLASLSEDEDDD-SIIDLVSQEPNLEDTQNTANDVTEENGISGLNAVQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDGIFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNLGDHTEEESLVREDGRNDEQLGGGKRNMESSSA 271
            MS  +S D FLSD S Q+DLLSV + L+S+         D  ++QAT S+ +  +       +EP WVL+ +Q+ P D E R+R + S+ +      S+IDL+SQEP      N+     EEN  +      K PR+ + S TPK++L L +APK+++SL+LLQS+DESLDLSGD+GAVGR K+  D +F DIKGVVYR  + A NTACVV M +DEARVTSV+ EVLTLH +R LF SDEI+ING+L +  E ++   E+  + +QL  GK   ES +A
Sbjct:    1 MSGSDSADGFLSDGSDQIDLLSVSNRLRSLTENGKASTQDPCVSQATPSQPSKKE-------KEPGWVLNQTQALPDDAEARRRAITSMFDXXXXXXSVIDLISQEPG-----NSLKPHLEENQKNEAGPT-KAPRNHRHSQTPKSTLKLAVAPKLDESLVLLQSNDESLDLSGDLGAVGRAKIHDDDLFLDIKGVVYRAKNQACNTACVVHMADDEARVTSVLGEVLTLHAERNLFTSDEIVINGDLSEELE-DTYSSEEAVSRDQLEKGKGKKESRNA 266          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A7S0BNE3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNE3_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 1.330e-15
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0
Query:  132 SHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDGIFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMD 216
            S T  NS+PL+   K+ ++L+L QS++ S DLSGD+GAVGRVK+ +  + FD+KG  Y     A N+  VV +G+ EARV+SV+D
Sbjct:  115 SKTKTNSIPLISPGKLEENLVLAQSAEVSFDLSGDVGAVGRVKIEEGKLSFDLKGTFYDAGRVACNSMLVVAVGDTEARVSSVID 199          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A2R6Q9E3_ACTCC (DNA-binding protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q9E3_ACTCC)

HSP 1 Score: 85.1 bits (209), Expect = 3.010e-15
Identity = 57/208 (27.40%), Postives = 103/208 (49.52%), Query Frame = 0
Query:   39 TTSRRASGKAHQTTNPEEPAWVLDHSQSRPTDRENRQRVLASLSEDEDDDSIIDLVSQEPNLEDTQNTANDVTEENGISGLNAVQKRPRSQK--VSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDG-----IFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNL 239
            +  +  S K  +T  P+   W L      P     R+  +    +         + +++P L   +  AN   ++ G  G   V K   ++K    H   + LPL+++ K+N S  L++   ES+DLSGD+GAVGRV V+ +      +FFD+KG +Y+ +   + T CVV  G+ EA++ ++M++ + L     ++ + E ++ G L
Sbjct:   98 SVKQEKSAKRAETNAPDNSVWTLSSDSESPHYSPIREASIGKSPKKR-------VKTEDPVLP-KKKKANSGIDKKGNDGDVEVAKEEIAEKHIEPHFSSSRLPLVLSEKVNRSKALVECEGESIDLSGDVGAVGRVVVSDNPSGNQEVFFDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLTPQSNVYEA-ETMVEGTL 296          
BLAST of Gchil7218.t1 vs. uniprot
Match: V4K3G1_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4K3G1_EUTSA)

HSP 1 Score: 84.3 bits (207), Expect = 6.850e-15
Identity = 58/218 (26.61%), Postives = 110/218 (50.46%), Query Frame = 0
Query:   45 SGKAHQTTNPEEPAWVLDHSQSRPTDRENRQRVLASLSEDEDDDSIIDLVSQEPNLEDT--------------QNTANDVTEE---NGISGLNAVQKRP----RSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQD--GIFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNL 239
            S K       ++  W+L      P+   +RQ+++ S  +DED  S+I     EP ++                Q   N+  +E   N     +A+  +     ++ K S    + LPL+++ K+N + +L++   +S+DLSGD+GAVGRV V+     ++ D+KG +Y+ +   + T CVV +G+ EA++ ++M++ + L     +F + E ++ G L
Sbjct:  114 SSKHKDAQGGDDSVWLLSSDSEPPSSDPSRQKMIMSTEKDED--SVIQAKEGEPAVKKAPKKKSPKKKPNSGHQTPKNESAQEILINDDKDTDAIVAKEVTTDKNVKSSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTTGDVYLDLKGTIYKSTIVPSRTFCVVNVGQSEAKIEAIMNDFIQLTPQSNVFEA-ETMVEGTL 328          
BLAST of Gchil7218.t1 vs. uniprot
Match: A9SY45_PHYPA (Predicted protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A9SY45_PHYPA)

HSP 1 Score: 82.4 bits (202), Expect = 2.760e-14
Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  122 VQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQ--DGIFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNLGD 241
            VQ++ R  K      +SLP++   K+N + +LL+   ++LDLSGD+GAVGR  V +  D +  D+KGVVY+ +   +NT  VV +G+ EA+V S+M + + L  D T +  +E ++ G L D
Sbjct:  167 VQEQERHSKPRVIAASSLPIVFGEKVNRTKVLLECEGDALDLSGDMGAVGRFTVNRPDDELLLDLKGVVYKTTIVPSNTYFVVNVGQMEAKVESIMTDFMQLRAD-TSWNENETMVEGTLKD 287          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A2P5CH35_PARAD (Uncharacterized protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5CH35_PARAD)

HSP 1 Score: 82.4 bits (202), Expect = 3.570e-14
Identity = 41/124 (33.06%), Postives = 73/124 (58.87%), Query Frame = 0
Query:  121 AVQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDG-----IFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNL 239
            A ++ P  Q  SH     LPLM++ K++ S  L++   +++DLSGD+GAVGRV ++        +F D+KG +Y+ +   + T CVV  G+ EA++ ++M++ + L     +F + E ++ G L
Sbjct:  231 AEEEAPEKQIESHDSSTRLPLMLSEKVHRSKALVECEGDTIDLSGDMGAVGRVMISDTSSGDHEMFLDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVFEA-ETMVEGTL 353          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A2K1JVN6_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVN6_PHYPA)

HSP 1 Score: 80.9 bits (198), Expect = 9.010e-14
Identity = 41/125 (32.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query:  121 AVQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQ--DGIFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNLGDHT 243
            A++ + + +++     +SLP++   K+N + +LL+   ++LDLSGD+GAVGR  V +  + +  D+KGV+Y+ +   +NT  +V +G+ +A+V S+M + + L  D T+   +E ++ G L D T
Sbjct:  156 ALETQEQERRIKPRAASSLPIVFGEKVNKTKVLLECEGDALDLSGDMGAVGRFTVNRRDNELLLDLKGVIYKTTIVPSNTFFLVNVGQTDAKVESIMSDFVQLRAD-TIGKENETVVEGTLQDFT 279          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A804JY36_MUSAM (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A804JY36_MUSAM)

HSP 1 Score: 79.7 bits (195), Expect = 1.080e-13
Identity = 54/176 (30.68%), Postives = 95/176 (53.98%), Query Frame = 0
Query:   75 QRVLASLSEDEDDDSIIDLVSQEPNLEDTQNT------ANDVTEENGISGLNAVQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDG-----IFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNL 239
            QR   +   D  +DS+     +  NLE T+N       A DV EE G +  + ++++P    VS    + LPLM+  K+  S  L++   +S+DLSGD+G+VGR+ ++        +  D+KG +Y+ +   + T CVV +G+ EA++ ++M++ + L     +F S E ++ G L
Sbjct:   52 QRQQDTFQIDSGEDSVFIETKKPTNLE-TENDQILSQDALDVNEE-GTAEQDIIRRKPAGPPVS----SRLPLMLPDKVQRSKALIECDGDSIDLSGDVGSVGRIVISNGPTGNHEMMLDLKGTIYKTTIVPSRTFCVVSIGQSEAKIEAIMNDFIQLEPKSNVFES-ETMVEGTL 220          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A7I8LHR3_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LHR3_SPIIN)

HSP 1 Score: 77.4 bits (189), Expect = 1.270e-13
Identity = 34/101 (33.66%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  139 LPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDG-----IFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEII 234
            LPL+++ K++ S  L++  DES+DLSGD+GAVGR+ ++++      +  D+KG +Y+ +   + T CVV  G+ EA++ ++M++ + L    ++F ++ +I
Sbjct:   22 LPLVISDKVHRSKALVECDDESIDLSGDVGAVGRIVISENSNDSHEMLLDLKGTIYKTAIVPSRTFCVVSFGQSEAKIEAIMNDFVQLKPHSSVFEAETVI 122          
BLAST of Gchil7218.t1 vs. uniprot
Match: A0A6P5Y8C2_DURZI (DNA-binding protein BIN4 isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Y8C2_DURZI)

HSP 1 Score: 80.5 bits (197), Expect = 1.400e-13
Identity = 44/150 (29.33%), Postives = 85/150 (56.67%), Query Frame = 0
Query:   95 SQEPNLEDTQNTANDVTEENGISGLNAVQKRPRSQKVSHTPKNSLPLMMAPKINDSLLLLQSSDESLDLSGDIGAVGRVKVAQDG-----IFFDIKGVVYRVSSHATNTACVVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNL 239
            SQ P  +D  + A  +TE +GI  ++  ++        H   + LPL+++ K++ S  L++   +S+DLSGDIGAVGR+ ++        +F D+KG +Y+ +   + T C+V  G+ EA++ ++M++ + L     ++ + E ++ G L
Sbjct:  170 SQTPKKKDVNDDAK-ITENDGI--MDTAEEASEKPIEPHVSTSRLPLVLSEKVHRSKALVECEGDSIDLSGDIGAVGRIIISDSASENHEMFLDLKGTIYKTTIVPSRTFCIVSFGQSEAKIEAIMNDFIQLKPQSNVYEA-ETMVEGTL 315          
The following BLAST results are available for this feature:
BLAST of Gchil7218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INA6_9FLOR1.020e-6346.79DNA-binding protein BIN4 n=1 Tax=Gracilariopsis ch... [more]
A0A7S0BNE3_9RHOD1.330e-1548.24Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2R6Q9E3_ACTCC3.010e-1527.40DNA-binding protein n=2 Tax=Actinidia TaxID=3624 R... [more]
V4K3G1_EUTSA6.850e-1526.61Uncharacterized protein n=1 Tax=Eutrema salsugineu... [more]
A9SY45_PHYPA2.760e-1438.52Predicted protein n=4 Tax=Physcomitrium patens Tax... [more]
A0A2P5CH35_PARAD3.570e-1433.06Uncharacterized protein n=2 Tax=Cannabaceae TaxID=... [more]
A0A2K1JVN6_PHYPA9.010e-1432.80Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
A0A804JY36_MUSAM1.080e-1330.68Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]
A0A7I8LHR3_SPIIN1.270e-1333.66Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A6P5Y8C2_DURZI1.400e-1329.33DNA-binding protein BIN4 isoform X1 n=2 Tax=Durio ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..281
IPR033246DNA-binding protein BIN4PANTHERPTHR34810DNA-BINDING PROTEIN BIN4coord: 50..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:560761..561606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7218.t1Gchil7218.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 560761..561606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7218.t1 ID=Gchil7218.t1|Name=Gchil7218.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=282bp
MSFINSEDEFLSDSSGQLDLLSVKHNLQSVPDEILNQATTSRRASGKAHQ
TTNPEEPAWVLDHSQSRPTDRENRQRVLASLSEDEDDDSIIDLVSQEPNL
EDTQNTANDVTEENGISGLNAVQKRPRSQKVSHTPKNSLPLMMAPKINDS
LLLLQSSDESLDLSGDIGAVGRVKVAQDGIFFDIKGVVYRVSSHATNTAC
VVQMGEDEARVTSVMDEVLTLHMDRTLFASDEIIINGNLGDHTEEESLVR
EDGRNDEQLGGGKRNMESSSAGVRGTILGSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4