Gchil7125.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7125.t1
Unique NameGchil7125.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length282
Homology
BLAST of Gchil7125.t1 vs. uniprot
Match: A0A2V3IP57_9FLOR (PAP_fibrillin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP57_9FLOR)

HSP 1 Score: 239 bits (611), Expect = 3.920e-75
Identity = 116/228 (50.88%), Postives = 164/228 (71.93%), Query Frame = 0
Query:   53 VSHAGNGSSDQDPGPDDSKDVPRSPQIRIPPNPAIAKKRLLEIITSLINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSSMHTTTKGNVRIRQIGQHVNTQEKLLINQTKWTFPDRNGIEQINASLDVECSYEFVTSFRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSGLMDVTYVDPTFRLSRFMGKKLAGVRNLFVRD 280
            + H GNG S+ +    +   +  + ++ +P +P+ AK RLLE++ +LIN+D QI E E LIR+LES      T+ FTE A++G+WKL+FSS+   T GN+RIR+IGQ V   +KL+IN+  WTFP  +G   INA+LDVEC Y FV   RL+++L EHKV +L R DGK  + P+DM  +I EL+L LP EFFDPSGL+DV+Y++P FR++RFMGK++AGVRN+F+R+
Sbjct:   55 LCHTGNGISENNSSEKNKDPIKPTSKVDLPSDPSTAKHRLLELLNTLINDDAQITEVERLIRRLESLNNPAATEIFTETALAGSWKLLFSSLRGKTSGNIRIRRIGQDVLPDKKLIINRALWTFPGSSGQGDINATLDVECKYTFVGPSRLKLELLEHKVVILERSDGKRIQLPSDMNAVIAELRLGLPVEFFDPSGLLDVSYIEPNFRIARFMGKRVAGVRNVFIRN 282          
BLAST of Gchil7125.t1 vs. uniprot
Match: R7QJC3_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJC3_CHOCR)

HSP 1 Score: 209 bits (531), Expect = 4.980e-63
Identity = 108/232 (46.55%), Postives = 153/232 (65.95%), Query Frame = 0
Query:   49 HLRPVSHAGNGSSDQDPGPDDSKDVPRSPQIRIPPNPAIAKKRLLEIITSLINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSSMHTTTKGNVRIRQIGQHVNTQEKLLINQTKWTFPDRNGIEQINASLDVECSYEFVTSFRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSGLMDVTYVDPTFRLSRFMGKKLAGVRNLFVRD 280
            H R   H+G   S+   G   S + PR            AK RLL++++SLIN D Q  + E LI +LES    PVT  FTEMA++G WKL+FSSM T T G++RIR+IGQ ++ ++K LIN+  W+FP  +G   I+A L  EC Y+FV   RL+++   H V+++  +DGK    P DM+++IT L+ ALP +FF+P GL+DV+Y++P FRL RF+GK+LAGVRN+FVR+
Sbjct:   60 HWRSSDHSGKKGSN---GSHPSSERPRKRDAET------AKVRLLKVLSSLINLDSQHGKVEQLILELESLNAKPVTDTFTEMALAGEWKLIFSSMTTKTDGSIRIRKIGQKIDPEKKKLINEVLWSFPSVDGTGNIDAYLWAECDYKFVAPGRLQVETPSHSVKIVETEDGKKQTLPDDMQKVITALRSALPIDFFEPQGLLDVSYIEPNFRLGRFVGKRLAGVRNVFVRE 282          
BLAST of Gchil7125.t1 vs. uniprot
Match: A0A7S1CY27_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY27_CYCTE)

HSP 1 Score: 91.7 bits (226), Expect = 2.160e-18
Identity = 58/198 (29.29%), Postives = 99/198 (50.00%), Query Frame = 0
Query:   89 KKRLLEIITSLINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSS-MHTTTKGNVRIRQIGQHVNT--QEKLLINQTKWTFPDRNGIEQINAS--LDVECSYEFVTSFRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSG-LMDVTYVDPTFRLSRFMGKKLAGVRNLFVRD 280
            K  LL+++  +   + + +  E  +  LE     P T +F  +A++GTW+L+FS+ +   +K  +R+R++ Q V T   +  + N   W        +  +AS    V+C+Y      R+ + L  H + L      K +K P D+  +I  +  A+P E FDPS   MD TY+D   R+ R+ G K  G R++F+R 
Sbjct:   34 KDLLLDLLPRMTGKEEEFRTVEHYVNLLEEQYSPPQTLDFLNLAMTGTWQLLFSTNLRRGSKLKIRLRELTQRVETIGLKGRVNNVALWDVALDPSSDVFDASGIFSVKCTYSINQGARMVVDLDGHTIEL-----AKGSKLPKDVPAVIASIHGAMPPELFDPSEHAMDTTYLDGDLRIVRYTGPKYEGARDIFIRS 226          
BLAST of Gchil7125.t1 vs. uniprot
Match: A0A7S1DMQ4_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMQ4_HEMAN)

HSP 1 Score: 90.9 bits (224), Expect = 4.680e-18
Identity = 65/211 (30.81%), Postives = 110/211 (52.13%), Query Frame = 0
Query:   91 RLLEIITS--LINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSSMHTTTKGN-VRIRQIGQHVNTQEK---------LLINQTKWTFPDRN-----GIEQINASLDVECSYEF--VTSFRLRIQLREHKVRLLPRKDGKP-NKPPADMKRIITELQLALPREFFDPS-GLMDVTYVDPTFRLSRFMGKKLAGVRNLFVRD 280
            RLL+++    + + DG+ Q+A   I +LE    +PV   F  + +SG W L + +    T    +++R+I   ++  +           L+++ +W F +                +V+C+Y    V S   R+ +   ++RL      +P NK P D +++I+ LQ ALPREFFDP+  LMD TY+DP  R+  F+G K AGVR+++VR+
Sbjct:   25 RLLKLLKEGDVASEDGR-QDAIKKITELEQLRTFPVDPSFFGLCVSGEWDLAYCTSRVGTPNEALKLRKISASIDAIDAGSAEIPGSGQLVHKIEWEFSEAAEEGGAAARDTKGVFEVKCAYNLSEVPSVPTRMIIGVEEMRLT----CEPVNKTPRDPQQLISCLQAALPREFFDPNEALMDTTYMDPNVRVVCFLGMKFAGVRHVYVRE 230          
BLAST of Gchil7125.t1 vs. uniprot
Match: B7G6D7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6D7_PHATC)

HSP 1 Score: 90.5 bits (223), Expect = 1.350e-17
Identity = 53/197 (26.90%), Postives = 99/197 (50.25%), Query Frame = 0
Query:   89 KKRLLEIITSLINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSS--MHTTTKGNVRIRQIGQHV--NTQEKLLINQTKWTFPDRNGIE-QINASLDVECSYEFVTSFRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSG-LMDVTYVDPTFRLSRFMGKKLAGVRNLFVR 279
            K  LLE++ S+   + + +  E L+  LE+  +   T  F  +A+ G+W+L+FS+    T      R+R++ Q +  N  + ++ NQ  W   +          +  V+C+Y      R+ + L +H ++       + +  P D++ ++  L  A+P+  FDPS   MD TY+D   R+ R+ G +L G R++F+R
Sbjct:   80 KGELLELLPSMTGQEDEFRRVEELVNALEARYQPAQTLTFLNLAMQGSWQLLFSTNLSGTPNPAKFRLRELTQRIECNNLDGVVTNQALWDLAEAGDAAFDATGTFSVKCNYSINQGARMIVDLEDHLLQ-----PARGSAIPQDVQGLVGYLHRAMPKTLFDPSDHAMDTTYLDVDLRIVRYTGARLEGSRDIFMR 271          
BLAST of Gchil7125.t1 vs. uniprot
Match: M2XSU5_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSU5_GALSU)

HSP 1 Score: 84.3 bits (207), Expect = 1.910e-15
Identity = 59/205 (28.78%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   89 KKRLLEIITSLINNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSSMH-------------TTTKGNVRIRQIGQHVNTQEKLLINQTKWTFPDRNGIEQINASLDVECSYEFVTSFRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSGLM-DVTYVDPTFRLSRFMGKKLAGVRNLFVR 279
            K+ L +++T LIN   Q +    LIR LE     P + E     + G WKLVFSS               T T G  ++R+ G      E +++N+ +W +  +      +  L++ C   F+   R   ++ ++++      +        + + I+  LQ  LPREFFDP+  M  V++VD   R+ +++GK+ AGVRN+F R
Sbjct:   77 KRHLRKMLTYLINMSPQRRRIFALIRGLEGRYSPPSSVESLVQQLQGDWKLVFSSTTLGIPSRELVVLSVTQTLGVGKLRENGCF----EIIMVNKCRWNYVQQGA----HGLLEIFCVLTFLGRCRFMCRVSDYRM------ETHDQVKATEARSIVAYLQRNLPREFFDPNNCMLQVSFVDNELRIVKWLGKRFAGVRNIFYR 267          
The following BLAST results are available for this feature:
BLAST of Gchil7125.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IP57_9FLOR3.920e-7550.88PAP_fibrillin domain-containing protein n=1 Tax=Gr... [more]
R7QJC3_CHOCR4.980e-6346.55PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]
A0A7S1CY27_CYCTE2.160e-1829.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1DMQ4_HEMAN4.680e-1830.81Hypothetical protein n=3 Tax=Hemiselmis andersenii... [more]
B7G6D7_PHATC1.350e-1726.90Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
M2XSU5_GALSU1.910e-1528.78Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 101..264
e-value: 4.6E-10
score: 39.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:288222..289067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7125.t1Gchil7125.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 288222..289067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7125.t1 ID=Gchil7125.t1|Name=Gchil7125.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=282bp
MYPSYLTNTAFHSPFALPARKRLRLGSTTSSRRPLTVVHWFSPPSVTRHL
RPVSHAGNGSSDQDPGPDDSKDVPRSPQIRIPPNPAIAKKRLLEIITSLI
NNDGQIQEAELLIRQLESATEYPVTQEFTEMAISGTWKLVFSSMHTTTKG
NVRIRQIGQHVNTQEKLLINQTKWTFPDRNGIEQINASLDVECSYEFVTS
FRLRIQLREHKVRLLPRKDGKPNKPPADMKRIITELQLALPREFFDPSGL
MDVTYVDPTFRLSRFMGKKLAGVRNLFVRDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom