Gchil7297.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7297.t1
Unique NameGchil7297.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length182
Homology
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A2V3J4F9_9FLOR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F9_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 6.000e-55
Identity = 101/185 (54.59%), Postives = 128/185 (69.19%), Query Frame = 0
Query:    1 MIRSSIFLRLLHSQKKRNFCSK---SEAPLASESSKRPTTAPFDSLGYELINTSTEPQAVQRAVID-SIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFPIAYNENETDK 181
            MI+  IF R+  +   R F SK     +P   ES ++    PFDSLGYELI++               +G  SFTVSGVRV GSV++MPFFST+WNVD   +++PSS ALVKL+VPRPDI+++GTGA  LPL   + +FFKDI+VNVE MDTKNA HTFNVLNQEDR+VAAAL P++Y  N++ K
Sbjct:    1 MIQGRIFSRIRANT--RLFSSKPGPQSSPAQPESGRK---TPFDSLGYELIDSXXXXXXXXXXXXXXGLGPNSFTVSGVRVAGSVLVMPFFSTIWNVDHFERITPSSLALVKLVVPRPDILVLGTGATLLPLPPGLKEFFKDIKVNVETMDTKNASHTFNVLNQEDRNVAAALLPVSYEGNKSGK 180          
BLAST of Gchil7297.t1 vs. uniprot
Match: L8GNY7_ACACA (Nuclear protein E33 isoform a isoform 3, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNY7_ACACA)

HSP 1 Score: 89.4 bits (220), Expect = 7.780e-20
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0
Query:   61 VIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFPIAY 174
            ++D    + F+++GV + G + ++P     WNV S+ ++SP S AL   I PR  I+++G G     ++  +  FF+   +++EA+DT NA  T+N+LNQEDR+VAAAL P  Y
Sbjct:    1 MVDGYSGSRFSINGVLLPGPLFLLPTLPLAWNVTSLDELSPESLALAYAIRPRVSILILGCGQRIKMINPQLRDFFRQKGISIEALDTWNAVATWNILNQEDRAVAAALMPFDY 114          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A6J0TYJ4_9SAUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TYJ4_9SAUR)

HSP 1 Score: 84.7 bits (208), Expect = 2.130e-17
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   53 EPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFPIAYNE 176
            E ++ Q   +++  +  FT+SG +V G  +I P     WNV +   ++  S  L +L+ PR +I+++GTG  +  L   V+KF +   V VE  DT NAC T+N L  E RS AAAL P +++E
Sbjct:   51 EKESNQIMFLETYSSGGFTISGCKVIGPCVIFPRAILQWNVGTHMDITAESLTLFRLLEPRIEILVLGTGTKTERLDPAVLKFMRQCGVAVEVQDTPNACATYNFLISERRSTAAALIPPSHHE 174          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A6J0TS30_9SAUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TS30_9SAUR)

HSP 1 Score: 84.7 bits (208), Expect = 2.440e-17
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   53 EPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFPIAYNE 176
            E ++ Q   +++  +  FT+SG +V G  +I P     WNV +   ++  S  L +L+ PR +I+++GTG  +  L   V+KF +   V VE  DT NAC T+N L  E RS AAAL P +++E
Sbjct:   57 EKESNQIMFLETYSSGGFTISGCKVIGPCVIFPRAILQWNVGTHMDITAESLTLFRLLEPRIEILVLGTGTKTERLDPAVLKFMRQCGVAVEVQDTPNACATYNFLISERRSTAAALIPPSHHE 180          
BLAST of Gchil7297.t1 vs. uniprot
Match: UPI0005D2E34D (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D2E34D)

HSP 1 Score: 84.0 bits (206), Expect = 3.180e-17
Identity = 38/109 (34.86%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   68 TSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFPIAYNE 176
            T FT++GV+  GSV+ +      W+   + +++  S ++++L+ P P+I ++G G  ++P+  ++M+F +   + +EA+D++NA  TFN+LN+E R VAAAL P    E
Sbjct:   54 TGFTINGVQYEGSVLCVGSLVLSWSPKKLSEITADSLSVLQLLRPAPEIFVLGCGRFTVPIDPELMRFIRSNGMKLEAIDSRNAASTFNILNEEGRMVAAALLPYRVQE 162          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A8C5QJU9_9ANUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QJU9_9ANUR)

HSP 1 Score: 84.3 bits (207), Expect = 5.180e-17
Identity = 60/170 (35.29%), Postives = 84/170 (49.41%), Query Frame = 0
Query:    4 SSIFLRLLHSQKKR-NFCSKSEAPLASESSKRPTTAPFDSLGYELIN-TSTEPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFP 171
            +S+ L LL S   R   C  + A    + S+    +P D   Y+    T  E  +     I+S  +  F ++G RV G   ++P     WNV S   +S  S AL  +IVP+ +I++VGTG     L   ++K  ++  V VE  DT NAC TFNVL  E R  AAAL P
Sbjct:   14 ASLGLPLLRSSLPRWRLCGSALALYTRQPSRSHRLSPSDDELYQKTTVTRLERDSADIMFIESYSSQGFIINGDRVVGPCAVVPKAILQWNVGSYKDISMESLALFHMIVPKIEILVVGTGDRVERLHPSILKAMREKGVAVEVQDTGNACATFNVLTSERRVTAAALIP 183          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A2K1XXS7_POPTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=5 Tax=Saliceae TaxID=238069 RepID=A0A2K1XXS7_POPTR)

HSP 1 Score: 82.0 bits (201), Expect = 2.200e-16
Identity = 37/104 (35.58%), Postives = 66/104 (63.46%), Query Frame = 0
Query:   68 TSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFP 171
            T F V+GV   GS++ +    T W   S  Q++P S ++ +++ P P+I+++G G  + P+  ++ +F +   + +EA+D++NA  T+N+LN+E R VAAAL P
Sbjct:   64 TGFRVNGVEYEGSLLCVGNLLTSWAPSSFSQITPDSLSIFQIVRPIPEILIIGCGRYTQPVDPELRRFIRSTGMKLEAVDSRNAASTYNILNEEGRPVAAALLP 167          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A1D1YFX7_9ARAE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YFX7_9ARAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.310e-16
Identity = 44/125 (35.20%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   47 LINTSTEPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFP 171
            LI++  E Q   +A  D    T FTV+GV+  GS++I+    T W+     +++  S ++++L+ P P+I+++G G    P+S  + +F +   + +EA+D++NA  T+N+LN+E R VAAAL P
Sbjct:   50 LIDSVPEDQLRFQAYSD----TGFTVNGVKYEGSLLIVGNLLTSWSPKRFSEITADSLSMLQLVRPTPEILILGCGRHIQPVSPQLRQFIRSTGMKLEALDSRNASSTYNILNEEGRIVAAALLP 170          
BLAST of Gchil7297.t1 vs. uniprot
Match: A0A7S2G7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7X4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.100e-16
Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:   70 FTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAAL 169
            F V+ V + GSV+++P    +W+  +   V+  S  LV LI P  +I+L+GTG VS P   +++++F+   + VE M+T ++  TFN+LN+EDR VAAAL
Sbjct:    6 FLVNDVELEGSVLVLPRSYLLWSPKTFDDVTVDSLKLVALIEPSIEILLIGTGEVSRPPKPEMVEYFRQHGIVVEQMNTSSSLSTFNILNEEDRRVAAAL 105          
BLAST of Gchil7297.t1 vs. uniprot
Match: NDUF3_DANRE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Danio rerio TaxID=7955 RepID=NDUF3_DANRE)

HSP 1 Score: 80.5 bits (197), Expect = 8.950e-16
Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   39 PFDSLGYELINTST-EPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVSPSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKNACHTFNVLNQEDRSVAAALFP 171
            PFD   Y   + S  + +A    VI S     F ++G  V+G   ++P     WNV S   +S  S +L  L+ P+ +++++GTGA +  L A+V++  K   + VE  DT NAC TFN L+ E R  AAAL P
Sbjct:   35 PFDDEQYRKTSVSIMQKEASAGTVIYSYSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGARTERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAAALIP 168          
The following BLAST results are available for this feature:
BLAST of Gchil7297.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4F9_9FLOR6.000e-5554.59NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
L8GNY7_ACACA7.780e-2038.60Nuclear protein E33 isoform a isoform 3, putative ... [more]
A0A6J0TYJ4_9SAUR2.130e-1737.10NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A6J0TS30_9SAUR2.440e-1737.10NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
UPI0005D2E34D3.180e-1734.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8C5QJU9_9ANUR5.180e-1735.29NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2K1XXS7_POPTR2.200e-1635.58NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A1D1YFX7_9ARAE3.310e-1635.20NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2G7X4_9STRA6.100e-1641.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
NDUF3_DANRE8.950e-1636.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 62..169
e-value: 1.0E-29
score: 102.7
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 26..177
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 57..174
e-value: 1.5E-34
score: 120.2
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 53..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:982799..983430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7297.t1Gchil7297.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 982799..983430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7297.t1 ID=Gchil7297.t1|Name=Gchil7297.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=182bp
MIRSSIFLRLLHSQKKRNFCSKSEAPLASESSKRPTTAPFDSLGYELINT
STEPQAVQRAVIDSIGTTSFTVSGVRVYGSVIIMPFFSTVWNVDSIHQVS
PSSFALVKLIVPRPDIMLVGTGAVSLPLSADVMKFFKDIRVNVEAMDTKN
ACHTFNVLNQEDRSVAAALFPIAYNENETDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007523NDUFAF3/AAMDC
IPR036748MTH938-like_sf