Gchil835.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil835.t1
Unique NameGchil835.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length319
Homology
BLAST of Gchil835.t1 vs. uniprot
Match: A0A2V3IIW3_9FLOR (RNA polymerase sigma factor SigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIW3_9FLOR)

HSP 1 Score: 561 bits (1446), Expect = 3.370e-200
Identity = 277/318 (87.11%), Postives = 300/318 (94.34%), Query Frame = 0
Query:    1 MSDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPPGS 318
            +SDNTVRWYLQLIGSDRLLTA+EEV+YGR V  LMHWQR R++L +TIGR P+D EWA F+DID  TF+ +L  AR+AKD+MIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDA+KGFKFSTYATWWVRQAVTRAIADQSRT+RLPVHLYDTITAIRR TKYLTN+L RPPLE E+A+YCNI+VEKLR+TRINMQ+AMPLDCPLTN+DDALTLSDVIES  ESPED+VESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTL+EIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPPGS
Sbjct:   44 VSDNTVRWYLQLIGSDRLLTAEEEVEYGRQVRKLMHWQRNRVELADTIGREPSDSEWADFVDIDRQTFATQLVDARKAKDRMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDAEKGFKFSTYATWWVRQAVTRAIADQSRTIRLPVHLYDTITAIRRATKYLTNELGRPPLEREIAEYCNITVEKLRSTRINMQAAMPLDCPLTNSDDALTLSDVIESDEESPEDRVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLEEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPPGS 361          
BLAST of Gchil835.t1 vs. uniprot
Match: R7QJX2_CHOCR (RNA_pol_sigma70 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJX2_CHOCR)

HSP 1 Score: 515 bits (1327), Expect = 7.300e-180
Identity = 250/316 (79.11%), Postives = 285/316 (90.19%), Query Frame = 0
Query:    1 MSDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPP 316
            ++DNTVRWYLQLIG DRLL A+EEV  GR +  LM WQR  ++L ++IGR P+ +EWA ++ +D   F+ RL  A+RAKD+MIVCNLRLVVSIAKRY+NRGMPLSDLIQEGTLGLIRACEKFDA++GFKFSTYATWWVRQAVTR+IADQSRT+RLPVHLYDTI AIRR TK+LTN+L RPPLE E+ADYC I+VEKLR TR+NMQSA+PLDCPL+++DDALTLSDVIES  ESPED+VESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTL+EIGR FDVTKERVRQIESKALRKLRHP+RSA+L+ YTPP
Sbjct:  189 LADNTVRWYLQLIGGDRLLRAEEEVTLGRQIRDLMQWQRMFVELADSIGRQPSTNEWAQYMGMDETDFATRLLHAKRAKDRMIVCNLRLVVSIAKRYMNRGMPLSDLIQEGTLGLIRACEKFDAERGFKFSTYATWWVRQAVTRSIADQSRTIRLPVHLYDTILAIRRATKFLTNELGRPPLEQEIADYCKITVEKLRATRVNMQSALPLDCPLSSSDDALTLSDVIESDEESPEDRVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLEEIGRAFDVTKERVRQIESKALRKLRHPYRSAILREYTPP 504          
BLAST of Gchil835.t1 vs. uniprot
Match: A0A7S2ZBG5_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBG5_9RHOD)

HSP 1 Score: 413 bits (1062), Expect = 3.180e-140
Identity = 205/313 (65.50%), Postives = 250/313 (79.87%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDA-LTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            SDNTVRWYL+L+G  RLL A+EEV   R +A L+ W+R R Q+ E +GR PT  EWA  L++D   F ++L Q R+AK+KMI  NLRLVVSIAKRY NRG+PLSD+IQEGTLGL+RA EKFD  +G+KFSTYATWWV+QAV RAIAD SR +RLPVHLYDTI A+RR T+ LT  L R P E E+A Y  +S+ KLR+TRI+M   +PL+ PL   DDA + L DV++S   SPED+VE +LLR+DLEHV+NSL+PRERDVVRMRYGLDDGR KTLDEIGR+F V+KERVRQIE+KA+RKLRHP+RSAVL+ +
Sbjct:  152 SDNTVRWYLELVGKGRLLRAEEEVDLSRRIAQLLQWERHRQQMYEEMGRDPTVEEWAEALEMDIKDFQSQLFQCRKAKEKMITSNLRLVVSIAKRYANRGLPLSDMIQEGTLGLVRAAEKFDGSRGYKFSTYATWWVKQAVARAIADHSRNIRLPVHLYDTIAAVRRATRCLTESLGRSPSEEEIAAYLGLSISKLRSTRIHMMPTIPLESPLKEVDDAGMCLGDVLQSTEVSPEDRVERALLREDLEHVINSLSPRERDVVRMRYGLDDGRMKTLDEIGRMFCVSKERVRQIETKAIRKLRHPYRSAVLRDF 464          
BLAST of Gchil835.t1 vs. uniprot
Match: J7G2H9_9CRYP (RNA-polymerase sigma factor n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G2H9_9CRYP)

HSP 1 Score: 389 bits (999), Expect = 1.970e-130
Identity = 194/313 (61.98%), Postives = 247/313 (78.91%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDI-DPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            +D++VRWYLQLIG  RLL  +EE++  R ++ L+HW+  ++ L E + R PT  EW     + D   F A L  ARRAK++M+  NLRLVVSIAKRY+NRGM L DLIQEG+LGLIRA EKFD++KGFKFSTYATWWV+QAVTRAIAD SRT+RLPVHLYDTI+AIR+ T+ L  ++ R P E E+A+  ++SVEKLR+   + Q  + L+ PL N+DDA  LSD IE+  ESPE+ VE S+LRDDLE+V+NSL+PRERDVVRMRYGLDDGR KTL+EIG++F VT+ERVRQIE+KA+RKLR P+RS++L+ Y
Sbjct:  131 ADDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRAILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLRQPYRSSILRDY 443          
BLAST of Gchil835.t1 vs. uniprot
Match: A9BK56_HEMAN (RpoD n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BK56_HEMAN)

HSP 1 Score: 389 bits (999), Expect = 1.970e-130
Identity = 194/313 (61.98%), Postives = 247/313 (78.91%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDI-DPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            +D++VRWYLQLIG  RLL  +EE++  R ++ L+HW+  ++ L E + R PT  EW     + D   F A L  ARRAK++M+  NLRLVVSIAKRY+NRGM L DLIQEG+LGLIRA EKFD++KGFKFSTYATWWV+QAVTRAIAD SRT+RLPVHLYDTI+AIR+ T+ L  ++ R P E E+A+  ++SVEKLR+   + Q  + L+ PL N+DDA  LSD IE+  ESPE+ VE S+LRDDLE+V+NSL+PRERDVVRMRYGLDDGR KTL+EIG++F VT+ERVRQIE+KA+RKLR P+RS++L+ Y
Sbjct:  128 ADDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRAILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLRQPYRSSILRDY 440          
BLAST of Gchil835.t1 vs. uniprot
Match: A0A7S1TCA4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCA4_9RHOD)

HSP 1 Score: 390 bits (1002), Expect = 2.310e-130
Identity = 193/313 (61.66%), Postives = 246/313 (78.59%), Query Frame = 0
Query:    1 MSDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            +  +T+ W++ LI  DRLL  DEEV+  R +A L++W+R R +L +++ R PT  EWA  +  +P  F+  L + R AK+KM+V NLRLVVSIAK+Y+NRG+PLSD+IQEGT+GLIRA EKFD  +GFKFSTYATWWV+QAV RAIADQSRT+RLPVHLYDT+ +IR+ T+ LT +L R P E E+A    I + KLR TR+ MQ  +PLD P+  N+D+LTL ++IE   E PE++VE SLLR+DLEHVVNSL+PRERDVVRMR+GLDDGR KTLDEIGRVF V+KERVRQIE+KA+RKLR P RS+VL+ +
Sbjct:  208 VGQDTLPWFMGLISGDRLLRTDEEVELSRQIALLLNWERKRTELADSLSREPTLSEWALQVGCNPEEFNFHLCEYRSAKEKMVVSNLRLVVSIAKKYMNRGLPLSDMIQEGTMGLIRAAEKFDGTRGFKFSTYATWWVKQAVARAIADQSRTIRLPVHLYDTLWSIRKVTRALTEELGRNPTEKEIATRVGIPIPKLRATRVYMQPCIPLDNPVQVNEDSLTLGEIIECEDECPEERVEQSLLREDLEHVVNSLSPRERDVVRMRFGLDDGRVKTLDEIGRVFCVSKERVRQIETKAIRKLRKPCRSSVLQDF 520          
BLAST of Gchil835.t1 vs. uniprot
Match: Q8S9D0_GUITH (RNA polymerase sigma factor n=1 Tax=Guillardia theta TaxID=55529 RepID=Q8S9D0_GUITH)

HSP 1 Score: 388 bits (996), Expect = 6.580e-130
Identity = 193/313 (61.66%), Postives = 247/313 (78.91%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDI-DPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            +D++VRWYLQLIG  RLL  +EE++  R ++ L+HW+  ++ L E + R PT  EW     + D   F + L  ARRAK++M+  NLRLVVSIAKRY+NRGM L DLIQEG+LGLIRA EKFD++KGFKFSTYATWWV+QAVTRAIAD SRT+RLPVHLYDTI+AIR+ T+ L  ++ R P E E+A+  ++SVEKLR+   + Q  + L+ PL N+DDA  LSD IE+  ESPE+ VE S+LRDDLE+V+NSL+PRERDVVRMRYGLDDGR KTL+EIG++F VT+ERVRQIE+KA+RKLR P+RS++L+ Y
Sbjct:  128 ADDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRSILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLRQPYRSSILRDY 440          
BLAST of Gchil835.t1 vs. uniprot
Match: Q98RZ3_GUITH (RNA-polymerase sigma factor n=2 Tax=Guillardia theta TaxID=55529 RepID=Q98RZ3_GUITH)

HSP 1 Score: 387 bits (993), Expect = 7.150e-130
Identity = 193/318 (60.69%), Postives = 246/318 (77.36%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDI-DPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPPGS 318
            +D++VRWYLQLIG  RLL  DEE++  R ++ L+HW+  ++ L + + R PT+ EW     + D   F + L  ARRAK++M+  NLRLVVSIAKRY+NRGM L DLIQEG+LGLIRA EKFD++KGFKFSTYATWWV+QAVTRAIAD SRT+RLPVHLYDTI+AIR+ T+ L  ++ R P E E+A   ++SVEKLR    + Q  + L+ PL N+DD   LSD IE+  ESPE+ VE S+LRDDLE+V+NSL+PRERDVVRMRYGLDDGR KTL+EIG++F VT+ERVRQIE+KA+RKLR P+RS++L+ Y    S
Sbjct:  111 ADDSVRWYLQLIGRVRLLRPDEEIQLAREISQLLHWEHVKISLRDKLRREPTNSEWTAACKVSDVRKFRSILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRNLNIEIGRSPTEEEIAKRMDMSVEKLRNVLQSAQPTLSLERPLKNDDDTSQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLRQPYRSSILRDYVASNS 428          
BLAST of Gchil835.t1 vs. uniprot
Match: A0A5J4YY77_PORPP (RNA polymerase sigma factor SigA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY77_PORPP)

HSP 1 Score: 384 bits (987), Expect = 1.320e-127
Identity = 190/311 (61.09%), Postives = 242/311 (77.81%), Query Frame = 0
Query:    3 DNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            D++V WY +LIG   LL++ EEV+  R +A L+ W+R R  L ET+ R P+D EWA  +  D  +F   L   R A+D+M++ NLRLVVSIAKRY +RG+PL D+IQEGTLGLIRA EKFD ++GFKFSTYATWWV+QAVTR+IAD SRT+RLPVHLY+T+ AI+R T+ L  Q  R P + EL+ Y  ++++KLR+ RI+MQ  +PLD PL  +D   TL ++IE   + PED+VE SLLR+DLEHVVNSL+PRERDVVRMRYGLDDGR KTL+EIGRVF VTKERVRQIE+KA+RKLRHP+R+ VL+ +
Sbjct:  247 DDSVGWYSRLIGDQNLLSSQEEVELSRQIAILLAWERERDALAETLNREPSDKEWAAHVGQDEASFERDLFLYRAARDRMVLSNLRLVVSIAKRYTSRGLPLGDMIQEGTLGLIRASEKFDGERGFKFSTYATWWVKQAVTRSIADNSRTIRLPVHLYETVNAIKRATRTLNEQHGRAPTDAELSKYMGMTMKKLRSLRIHMQPVVPLDKPLKVDDGTTTLGEIIECEDDPPEDRVEQSLLREDLEHVVNSLSPRERDVVRMRYGLDDGRVKTLEEIGRVFAVTKERVRQIENKAIRKLRHPYRAGVLRDF 557          
BLAST of Gchil835.t1 vs. uniprot
Match: A0A7S0ZI13_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI13_9RHOD)

HSP 1 Score: 378 bits (971), Expect = 5.980e-126
Identity = 188/312 (60.26%), Postives = 235/312 (75.32%), Query Frame = 0
Query:    2 SDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGRAPTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNRGMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQSRTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTTRINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAY 313
            SDN V WYL+LI    LLT +EEV+Y R ++ L+ W+R R +L     R  TDHEWA +L+I+   F + L   R ++DKMIV NLRLVV IAK+YLNRG+P SD+IQEGTLGLIRA EK+D ++GFKFSTYATWWV+QAV R+IAD +R +RLPVHLYDT+  IR+  + L  +    P + E+A+Y  ISV KLR+ ++ MQ    LD P+  +D  LTL ++IE   E PE++VE SLLR D+EHVVNSL+PRERDVVRMRYGLDDGR KTLDEIG VF VTKERVRQIE+KA+RKLRHP+RS VL+ +
Sbjct:  189 SDNVVAWYLRLIADGNLLTHEEEVRYSRHISILLEWERVRAELEVKYEREVTDHEWAKYLNIEISEFLSNLQLYRNSRDKMIVSNLRLVVHIAKKYLNRGLPFSDMIQEGTLGLIRAAEKYDGERGFKFSTYATWWVKQAVARSIADSARAIRLPVHLYDTVNLIRKTVRGLAQESGVAPSDSEVAEYLGISVAKLRSMKVLMQPIGCLDQPVRKDDGVLTLGELIECEQEQPEERVEHSLLRQDIEHVVNSLSPRERDVVRMRYGLDDGRMKTLDEIGNVFAVTKERVRQIEAKAIRKLRHPYRSEVLRGF 500          
The following BLAST results are available for this feature:
BLAST of Gchil835.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIW3_9FLOR3.370e-20087.11RNA polymerase sigma factor SigA n=1 Tax=Gracilari... [more]
R7QJX2_CHOCR7.300e-18079.11RNA_pol_sigma70 domain-containing protein n=1 Tax=... [more]
A0A7S2ZBG5_9RHOD3.180e-14065.50Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
J7G2H9_9CRYP1.970e-13061.98RNA-polymerase sigma factor n=1 Tax=Chroomonas mes... [more]
A9BK56_HEMAN1.970e-13061.98RpoD n=1 Tax=Hemiselmis andersenii TaxID=464988 Re... [more]
A0A7S1TCA4_9RHOD2.310e-13061.66Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
Q8S9D0_GUITH6.580e-13061.66RNA polymerase sigma factor n=1 Tax=Guillardia the... [more]
Q98RZ3_GUITH7.150e-13060.69RNA-polymerase sigma factor n=2 Tax=Guillardia the... [more]
A0A5J4YY77_PORPP1.320e-12761.09RNA polymerase sigma factor SigA n=1 Tax=Porphyrid... [more]
A0A7S0ZI13_9RHOD5.980e-12660.26Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 106..119
score: 67.47
coord: 254..266
score: 50.87
coord: 275..290
score: 53.75
coord: 290..301
score: 68.28
coord: 130..138
score: 78.71
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 275..301
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 78..303
e-value: 5.3E-37
score: 124.9
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 252..303
e-value: 1.9E-19
score: 68.9
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 162..237
e-value: 2.0E-7
score: 31.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 155..231
e-value: 9.0E-11
score: 44.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 232..315
e-value: 5.4E-31
score: 108.2
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 83..151
e-value: 2.9E-21
score: 75.0
IPR009042RNA polymerase sigma-70 region 1.2PFAMPF00140Sigma70_r1_2coord: 5..32
e-value: 4.0E-6
score: 26.7
NoneNo IPR availableGENE3D1.10.601.10RNA Polymerase Primary Sigma Factorcoord: 65..154
e-value: 6.9E-48
score: 165.9
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTICcoord: 3..314
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 3..314
NoneNo IPR availableCDDcd06171Sigma70_r4coord: 244..302
e-value: 8.97625E-14
score: 62.8922
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 2..152
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 214..313
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 155..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:264556..265512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil835.t1Gchil835.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 264556..265512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil835.t1 ID=Gchil835.t1|Name=Gchil835.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=319bp
MSDNTVRWYLQLIGSDRLLTADEEVKYGRLVASLMHWQRARLQLTETIGR
APTDHEWAHFLDIDPHTFSARLAQARRAKDKMIVCNLRLVVSIAKRYLNR
GMPLSDLIQEGTLGLIRACEKFDADKGFKFSTYATWWVRQAVTRAIADQS
RTVRLPVHLYDTITAIRRGTKYLTNQLARPPLEHELADYCNISVEKLRTT
RINMQSAMPLDCPLTNNDDALTLSDVIESHAESPEDKVESSLLRDDLEHV
VNSLTPRERDVVRMRYGLDDGRAKTLDEIGRVFDVTKERVRQIESKALRK
LRHPFRSAVLKAYTPPGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR014284RNA_pol_sigma-70_dom
IPR007630RNA_pol_sigma70_r4
IPR007624RNA_pol_sigma70_r3
IPR036388WH-like_DNA-bd_sf
IPR007627RNA_pol_sigma70_r2
IPR009042RNA_pol_sigma70_r1_2
IPR013325RNA_pol_sigma_r2
IPR013324RNA_pol_sigma_r3/r4-like