Gchil1209.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1209.t1
Unique NameGchil1209.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length424
Homology
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A2V3IKH8_9FLOR (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH8_9FLOR)

HSP 1 Score: 380 bits (975), Expect = 1.540e-126
Identity = 243/432 (56.25%), Postives = 285/432 (65.97%), Query Frame = 0
Query:    1 MAARALFLTSPASSPPPPSAXXXXXXXXXXXXXXXXXXXGRAPGRLLQQLLRERDAIAPLRPALPNLCALLDAEIARCRAASSSAPPRRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGA------LPMSCEADTLPPLPSLPSPTMAPYHSPLSLFRAASSPLSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALSPLSAKLLRSSALDDLAATSSVGEDSAESSQTSEHDDTAP---ASRVALCAPTALGAGGFIGREFYNGAFSNAAASGCSVARSAWEEGTTCSSPLVSDSTNACGGNSAFETPSPHILTCSSTVTALNAADDLY 423
            MAARALFL+SP S               XXXXXXXXXXX  +  RLL QLLRERD I P R +LPNL ALLDAEIAR RAA+ S  PR+R K+PVP+DKFPDYNFVGRLLGPRGTTL+TLERDTGCRIMIRG+GSIRKDKEPDVRGKPGWEHVF+EPLHVVIEAPD L EP+AS ALARA+DAVE LL+PVPEERDALKRHQLRALAIMNGT+RGA      +P   E++ L PLPS   P ++ Y S LS+    ++ L +                                    L  L+ KL  +++LD+   +SSVG+D+ ESS  SEHDD AP   AS + L   TALG GGF+G EFYNGAFSN A+S  +     W++  + S+P  S          AF  PSPH+LT +STVT L   DD+Y
Sbjct:    1 MAARALFLSSPTSX--------------XXXXXXXXXXXXXSAARLLAQLLRERDRILPFRASLPNLVALLDAEIARARAATPSTHPRKRVKLPVPSDKFPDYNFVGRLLGPRGTTLRTLERDTGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFNEPLHVVIEAPDGLQEPSASAALARAADAVELLLVPVPEERDALKRHQLRALAIMNGTYRGAPHAQYPIPYPIESEPLAPLPS---PILSAYDS-LSMLLEPTASLRKSPSSTDHFVDGACSIPVSTPLVN-------------LPTLNTKLRAAASLDEFG-SSSVGDDTPESSHGSEHDDAAPSTSASNLKLPTGTALGVGGFMGHEFYNGAFSNGASSPTTT----WDQTVSSSAPFAS----------AFGAPSPHVLTSTSTVTPLQRRDDVY 386          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A7S0BGQ7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGQ7_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 2.510e-61
Identity = 112/213 (52.58%), Postives = 140/213 (65.73%), Query Frame = 0
Query:   47 LQQLLRERDAIAPLRPALPNLCALLDAEIARC----------------------------------RAASSSAPPRRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGALPMSCEADT 225
            L++L++ER  +  ++   P   +++D EI R                                   R+ASS+   ++R K+P+PADK+P+YNFVGRLLGPRG TLK LER+TGC+IMIRGRGSIRKDKE +VRGKPGWEHVF+EPLHVVIEA     EP AS AL RA +A+E LL+PVPEE D+LKR QLR LAI+NGTFRG +    EA T
Sbjct:   23 LEELIKERTVMEQIKSKCPLSWSVIDTEITRLQLETQQFSGIASGMSNGATANDVNDSSHNSTSSRRSASSNMGSKKRVKLPIPADKYPEYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKETEVRGKPGWEHVFNEPLHVVIEA--DFEEPHASRALNRAKEAIELLLVPVPEENDSLKRQQLRDLAILNGTFRGGISEGKEAGT 233          
BLAST of Gchil1209.t1 vs. uniprot
Match: M2XRR5_GALSU (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR5_GALSU)

HSP 1 Score: 206 bits (523), Expect = 3.190e-58
Identity = 109/196 (55.61%), Postives = 137/196 (69.90%), Query Frame = 0
Query:   47 LQQLLRERDAIAPLRPALPNLCALLDAEIARC----RAASSS-----------------------APPRRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRG 215
            L  L+RER+ +  L+ A+P    LL+ EI+      R +SSS                        P ++R K+P+PA K+PDYNFVGRLLGPRG TLK LER+TGC+IMIRG+GSIRKDKE +VRGKPGWEHVF+EPLHVV+EA   + E +A VAL RA +++E LL+PVPEE+D+LKR QLR LAI+NGTFRG
Sbjct:   10 LGDLIRERNTLETLKSAVPQTYWLLEREISEIETLLRDSSSSIQDVYFGNVNQTQNQTNKYTYNSVPVKKRIKLPIPAHKYPDYNFVGRLLGPRGATLKALERETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFNEPLHVVVEA--EMDEASALVALNRAKESIELLLVPVPEEKDSLKRQQLRDLAILNGTFRG 203          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A2V3IN56_9FLOR (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN56_9FLOR)

HSP 1 Score: 210 bits (534), Expect = 5.600e-58
Identity = 114/210 (54.29%), Postives = 140/210 (66.67%), Query Frame = 0
Query:   47 LQQLLRERDAIAPLRPALPNLCALLDAEIARCRAA--------------SSSAPP----------RRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGALPMSCEADTLPPLPSL 232
            L++L+RE + ++ ++  +PN   +L+ EI R RAA              +   PP          R+R K+ VPAD++P+YNFVGRLLGPRG TLK LERDTGCRIMIRG+GSIRKDKE DVRGKPGWEHVF+EPLHVVIE  DS  E +A+  LA A   VE LLIPVPEERD+LKR QLR LAI+NGT R    +   +    PL S+
Sbjct:    9 LEELVREAEVLSRIKADVPNAWKILEMEIGRARAAIVRANDPEASVSLSTDPTPPLQDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEADVRGKPGWEHVFNEPLHVVIEVVDSPDELSATRILAHAKQLVEMLLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGASQHTNPLSSM 218          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A7S1T622_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T622_9RHOD)

HSP 1 Score: 202 bits (514), Expect = 1.330e-56
Identity = 128/282 (45.39%), Postives = 154/282 (54.61%), Query Frame = 0
Query:   45 RLLQQLLRERDAIAPLRPALPNLCALLDAEIARCRAA----------------------------------------------------------------SSSAPP----------------RRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGAL---PMSCEADTLPPLP-------SLPSPT 236
            R + +LLRER A+ PLR +LP   +LLDAEI R +AA                                                                +SS PP                ++R K+P+PADK+P YNFVGRLLGPRG TLK LER+TGC+IMIRGRGSIRKDKE +VRGKPGWEHVF+EPLHVVIEA   + E +A+ AL RA +AVE LL+PVPE+RD+LKR QLR LAI+NGTFRG     P S    T+  LP        +P PT
Sbjct:   18 RHMDELLRERAALEPLRGSLPIASSLLDAEILRVQAAVDRVGDVVTNASVMAVQSSVSMAASSTGTLSLDVEHAAGLAEDPALLVQQLTLHASTSVAGSSPTSSPPPYTRSRSAPGIPTASVVKKRVKLPIPADKYPVYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKEIEVRGKPGWEHVFNEPLHVVIEA--EMDEISATRALNRAKEAVELLLVPVPEDRDSLKRQQLRELAILNGTFRGGALTQPHSLGPATMAMLPPGVNAHSGIPGPT 297          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A5J4Z4E7_PORPP (Protein quaking-A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4E7_PORPP)

HSP 1 Score: 200 bits (509), Expect = 2.830e-55
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0
Query:   88 RRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRG 215
            ++R K+PVPADK+PDYNFVGRLLGPRG TLK LERDTGC+IMIRG+GSIRKDKE +VRGKPGWEHVF+EPLHVV+EA +   E  A+ AL RA +AVE LL+PVPE+RD+LKR QLR LAI+NGTFRG
Sbjct:  193 KKRVKLPVPADKYPDYNFVGRLLGPRGATLKALERDTGCKIMIRGKGSIRKDKEMEVRGKPGWEHVFNEPLHVVVEAENE--EAVATRALNRAKEAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRG 318          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A7S0ZJQ1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJQ1_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 4.800e-55
Identity = 94/135 (69.63%), Postives = 113/135 (83.70%), Query Frame = 0
Query:   82 SSSAPPRRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGA 216
            S+S  P++R K+ VPA+++P+YNFVGRLLGPRG TLK LER+TGC+IMIRGRGSIRKDKE +VRGKPGWEHVF+EPLHVVIEA     +     AL RA +AVE LL+PVPE+RD+LKR QLR LAI+NGTFRG+
Sbjct:  203 STSTLPKKRVKLAVPAERYPEYNFVGRLLGPRGATLKQLERETGCKIMIRGRGSIRKDKEGEVRGKPGWEHVFNEPLHVVIEADSMEDDAVCHRALNRAREAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRGS 337          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A7S1XEW8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEW8_9RHOD)

HSP 1 Score: 183 bits (465), Expect = 3.330e-52
Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 0
Query:   78 CRAASSSAP-PRRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGALPMSCEADTLPPLPSLPSPTMAPYHSP 243
            C++A +     R+R ++PVP +K+PDYNFVGRLLGPRG TLK LE+DTGCRI+IRG+GS+RK++E +V GKPGWEHVF +PLHV+IE+  +  +  A  AL RA +A+E LL+PVP+++D+LKRHQLR LAI+NGTFR     S  + T     SL +  M P  SP
Sbjct:    1 CKSAPAQEEMARKRVRVPVPTEKYPDYNFVGRLLGPRGATLKKLEQDTGCRILIRGKGSVRKEREAEVVGKPGWEHVFTDPLHVIIESSST--DAHAQKALNRAKEAIELLLVPVPDDQDSLKRHQLRELAIINGTFRDKDVTSRASTTNTSPISLDAYDMDPEQSP 165          
BLAST of Gchil1209.t1 vs. uniprot
Match: M1VE76_CYAM1 (Similar to RNA-binding protein QKI n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VE76_CYAM1)

HSP 1 Score: 187 bits (475), Expect = 1.630e-49
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0
Query:   88 RRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFR----------GALPMSCEADT 225
            ++R ++ VPAD++PDYNFVGRLLGPRG TLK LE++TGC+IMIRG+GSIRKDKE +VRGKPGWEHVF EPLHV++EA   + E  A  AL RA + VE LLIPVPE+RD LKR QLR LA++NGT R          GA PMS  A T
Sbjct:  435 KKRCRVSVPADQYPDYNFVGRLLGPRGATLKKLEKETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFSEPLHVILEA--EMEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAMLNGTLRQSATEHEIPTGASPMSGSAGT 580          
BLAST of Gchil1209.t1 vs. uniprot
Match: A0A7J7IBG4_9RHOD (KH domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBG4_9RHOD)

HSP 1 Score: 187 bits (476), Expect = 2.700e-49
Identity = 91/140 (65.00%), Postives = 109/140 (77.86%), Query Frame = 0
Query:   88 RRRTKIPVPADKFPDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKRHQLRALAIMNGTFRGALPMSCEADTLP 227
            ++R ++ VPAD++PDYNFVGRLLGPRG TLK LER+TGC+IMIRG+GSIRKDKE +VRGKPGWEHVF EPLHV++EA   + E  A  AL RA + VE LLIPVPE+RD LKR QLR LAI+NGT R + P +      P
Sbjct:  501 KKRCRVSVPADQYPDYNFVGRLLGPRGATLKKLERETGCKIMIRGKGSIRKDKESEVRGKPGWEHVFSEPLHVILEA--EMEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAILNGTLRCSWPGNESGSAAP 638          
The following BLAST results are available for this feature:
BLAST of Gchil1209.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKH8_9FLOR1.540e-12656.25Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7S0BGQ7_9RHOD2.510e-6152.58Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2XRR5_GALSU3.190e-5855.61RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A2V3IN56_9FLOR5.600e-5854.29Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7S1T622_9RHOD1.330e-5645.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z4E7_PORPP2.830e-5575.00Protein quaking-A n=1 Tax=Porphyridium purpureum T... [more]
A0A7S0ZJQ1_9RHOD4.800e-5569.63Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1XEW8_9RHOD3.330e-5255.69Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
M1VE76_CYAM11.630e-4963.51Similar to RNA-binding protein QKI n=1 Tax=Cyanidi... [more]
A0A7J7IBG4_9RHOD2.700e-4965.00KH domain-containing protein n=1 Tax=Cyanidiococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 87..185
e-value: 8.4E-8
score: 41.9
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 91..136
e-value: 2.1E-6
score: 27.4
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 42..219
e-value: 1.9E-52
score: 180.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 91..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..423
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 104..161
score: 8.491766
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 91..214
e-value: 2.24959E-49
score: 161.643
IPR045071KH domain-containing BBP-likePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 26..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:160789..162060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1209.t1Gchil1209.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 160789..162060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1209.t1 ID=Gchil1209.t1|Name=Gchil1209.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=424bp
MAARALFLTSPASSPPPPSASPSASRASPSPSSPSASPSGRAPGRLLQQL
LRERDAIAPLRPALPNLCALLDAEIARCRAASSSAPPRRRTKIPVPADKF
PDYNFVGRLLGPRGTTLKTLERDTGCRIMIRGRGSIRKDKEPDVRGKPGW
EHVFHEPLHVVIEAPDSLHEPAASVALARASDAVETLLIPVPEERDALKR
HQLRALAIMNGTFRGALPMSCEADTLPPLPSLPSPTMAPYHSPLSLFRAA
SSPLSQQRASAAVAAAASAPPPPPPQQQQPQPHHHKSPPASALSPLSAKL
LRSSALDDLAATSSVGEDSAESSQTSEHDDTAPASRVALCAPTALGAGGF
IGREFYNGAFSNAAASGCSVARSAWEEGTTCSSPLVSDSTNACGGNSAFE
TPSPHILTCSSTVTALNAADDLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR045071BBP-like