Gchil8065.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A2V3IJL6_9FLOR (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJL6_9FLOR) HSP 1 Score: 303 bits (777), Expect = 1.490e-99 Identity = 150/219 (68.49%), Postives = 170/219 (77.63%), Query Frame = 0
Query: 178 MDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHA-------HAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNYC 389
MDLF +S YTFG K Q +SK +Q+ S +LA LR Y RG+RR+VAAV+LVH+HRFPH+LLLQRRDGRGEFVLPGGRLRPGES E+GLQRKL SK+TP + +AR DVGEKLCSWYAIDFDRRY PYVPAHVTKPKEELH+YAVSLPS FTFAVP NL LLAVPI ++FNN+ATYGD+ISAIPSVLS+YHFNYC
Sbjct: 1 MDLFHISNYTFGTKDEQARSKAMQSLSKTQLAQILRDNYKQRGIRRSVAAVILVHEHRFPHILLLQRRDGRGEFVLPGGRLRPGESNEEGLQRKLTSKLTPVSPXXXXXXXXXXXDQMLELDDQLQQSARPDVGEKLCSWYAIDFDRRYFPYVPAHVTKPKEELHVYAVSLPSKFTFAVPKNLHLLAVPICDVFNNSATYGDIISAIPSVLSRYHFNYC 219
BLAST of Gchil8065.t1 vs. uniprot
Match: R7QCN0_CHOCR (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCN0_CHOCR) HSP 1 Score: 277 bits (708), Expect = 7.260e-87 Identity = 130/228 (57.02%), Postives = 167/228 (73.25%), Query Frame = 0
Query: 162 SSSGDDAFGALDVLCTMDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNYC 389
+ S +D F L+ L +MD++D+S YTFG K +++SK++Q E+A L K Y RG+RR+V V+LVH H FPH+LLLQR DG+GE+ LPGG+LRPGES E+GLQRKL +K+ P+ DE + LDVGE++C+WYA DF RRY PYVPAHVTK KEELH+Y V LP+ F F+VP NLQL+AVP+FELF N+ATYGDVISAIP +LS++H NYC
Sbjct: 163 TDSDEDPFAGLNELASMDIYDLSNYTFGKKNQESKSKVMQLMPRAEMAKVLEKNYEERGMRRSVGGVILVHSHNFPHILLLQRSDGKGEYALPGGKLRPGESDEEGLQRKLNTKLKPEGQADTDEEQE-----------LDVGERICNWYATDFHRRYYPYVPAHVTKVKEELHVYIVLLPNKFMFSVPKNLQLVAVPLFELFKNSATYGDVISAIPPLLSRWHINYC 379
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A7S0G5F4_9RHOD (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5F4_9RHOD) HSP 1 Score: 206 bits (524), Expect = 1.930e-60 Identity = 105/213 (49.30%), Postives = 142/213 (66.67%), Query Frame = 0
Query: 177 TMDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDAS-ETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
T++L+DVSKYTFG K ++Q +++S E L + Y RG+RR+V AV+L+ +HRFPH+LLLQ FVLPGGRLRPGE+ DGL RKL SK++P TP E E +GE++ +WY+ DF R PY+PAHVTKPKE ++ V LP S TFAVP + QLLAVP+FE+++N YG VI+A+PS+LS++H N+
Sbjct: 92 TLNLYDVSKYTFGTK-GESQKDSKKSSSAEERQKDLEEKYKKRGMRRSVGAVLLLQNHRFPHILLLQSSKRTKNFVLPGGRLRPGENDVDGLLRKLQSKLSPPPDVATPPEFE--------------IGEQIATWYSPDFSERRYPYIPAHVTKPKESHAVFTVQLPDSCTFAVPKSYQLLAVPLFEVYDNMEQYGPVITAVPSLLSRFHMNF 289
BLAST of Gchil8065.t1 vs. uniprot
Match: M2XR30_GALSU (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XR30_GALSU) HSP 1 Score: 192 bits (488), Expect = 6.170e-56 Identity = 100/212 (47.17%), Postives = 138/212 (65.09%), Query Frame = 0
Query: 177 TMDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
T++L+ V YTFG K+A S+ +P L++ Y RGLR +VA V+LVH HR PHVL+LQR G F LPGGRLRPGE +GL RKL +++ +S S+ H +VG+ L +W+ DF PY+P HVTKPKE+L++Y V LP S F+VP++LQLLA+P+F++FNNA YG+VIS++P++LS+YH NY
Sbjct: 36 TVNLYKVDNYTFGTKQA---SQKQHERNP----QRLKEKYQERGLRHSVAGVLLVHHHRHPHVLVLQRTKDAGSFWLPGGRLRPGEGDLEGLSRKLDNRL---------KSPSQERSH------WEVGDFLATWWYPDFSDNRYPYIPPHVTKPKEKLNLYLVQLPESCAFSVPSDLQLLAIPLFQVFNNAEQYGEVISSLPTLLSRYHVNY 225
BLAST of Gchil8065.t1 vs. uniprot
Match: L8GVB5_ACACA (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVB5_ACACA) HSP 1 Score: 178 bits (452), Expect = 1.090e-50 Identity = 93/212 (43.87%), Postives = 129/212 (60.85%), Query Frame = 0
Query: 177 TMDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
T++L+++ KYTFG K AQ + AA + D Y G+RR V AV+LVH H PHVLLLQ G F LPGGRL+PGE+ DGL+RKL K+ P ++++ +VGE LC W+ +F+ PY+P H+T+PKE I+ V LP FAVP NL+LLAVPIF+L++NA+ YG +IS++P L +++F Y
Sbjct: 25 TINLYNLEKYTFGKKEAQMEKDTSVAARLLRMKD----MYEREGMRRTVDAVLLVHQHNHPHVLLLQI--GNTFFKLPGGRLKPGENEVDGLKRKLTKKLAP--------------NYSNYQLDWEVGELLCQWWRPNFETLQYPYIPPHITRPKECKKIFLVQLPERCVFAVPKNLKLLAVPIFDLYDNASQYGPIISSLPQTLGRFNFTY 216
BLAST of Gchil8065.t1 vs. uniprot
Match: A4S1X4_OSTLU (Pre-mRNA cleavage factor Im 25 kDa subunit n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S1X4_OSTLU) HSP 1 Score: 165 bits (418), Expect = 8.460e-46 Identity = 86/210 (40.95%), Postives = 124/210 (59.05%), Query Frame = 0
Query: 178 MDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFN 387
+D++ +S YTFG KRA+ + A+ E +R Y G RR+V A+ +V HR PHVLLLQ F LPGGRLR GE +GL RK+ +K+ P+ + ++ E D+G+++ +WY ++ + PY+PAH+TKPKEE ++ LP FAVP NL+LLAVP+FEL+ N YG I++IP +LS+Y N
Sbjct: 12 VDVYSLSNYTFGTKRARGEKD----ATAAERLLRMRAQYEKEGKRRSVGAICMVSQHRTPHVLLLQITPT--SFKLPGGRLRAGEGDVEGLARKMRNKLQPERDDGLEQYE------------FDIGDQVATWYRTSYEPQMYPYLPAHITKPKEEYRMFVAHLPEKCYFAVPKNLKLLAVPLFELYGNPGKYGAEIASIPHLLSRYRLN 203
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A5J4Z888_PORPP (Pre-mRNA cleavage factor Im 25 kDa subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z888_PORPP) HSP 1 Score: 169 bits (429), Expect = 8.850e-46 Identity = 91/226 (40.27%), Postives = 130/226 (57.52%), Query Frame = 0
Query: 177 TMDLFDVSKYTFGIKRAQTQ------------SKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRD---GRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFN 387
T++++++ Y+FG+K AQ +L SP + A R+ Y RG RR+VAA + VH+H FPH+LLL+ R G + LPGGRLRPGE+ DG+ RKL S + + H+ A + +VG ++ WY DF PY+ HV P+EELH+YAV LPSS TF VP +L+L+AVP+F++F A YG +I+++P LS H N
Sbjct: 123 TLNIYNLEAYSFGVKPAQINLPPRTGGGAPFGMRLEYRQSP-QYALKKRQRYEERGTRRSVAAALFVHEHFFPHILLLRERAALAGVPAYFLPGGRLRPGETDADGVSRKLESALGHGVA-------GSHSETGSAGSSWEVGPQMSVWYGPDFSNNLYPYIAPHVDTPREELHVYAVYLPSSRTFVVPKHLELIAVPLFDIFQQPARYGAIIASLPVSLSNLHMN 340
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A8J4Q5E7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q5E7_9MYCE) HSP 1 Score: 164 bits (415), Expect = 2.220e-45 Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 0
Query: 177 TMDLFDVS-KYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITP---DASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
T+ L++ + Y+FGIK + S ++ TY G+R+ V A+++VHDH PH+LLLQ G F LPGG+L+PGES DGLQRKL K+ P + SETP ++G+ + +W+ +F+ PY+ H TKPKE +Y V+LP TFAVP+NL L AVP+FE++NNA YG +IS +P ++S+Y+F Y
Sbjct: 6 TLTLYNFNTSYSFGIKDPVVEKD----PSVTSRLARMKDTYEKEGIRKTVEAIIIVHDHGHPHILLLQI--GNSFFKLPGGKLKPGESEIDGLQRKLTKKLLPIGSNESETP----------------WEIGDHVSTWWRPNFEPSIYPYITPHTTKPKECKKLYVVTLPEKCTFAVPSNLTLRAVPLFEIYNNATRYGSIISCVPQLISRYNFVY 199
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A7S1PJ78_9EUKA (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PJ78_9EUKA) HSP 1 Score: 164 bits (415), Expect = 2.290e-45 Identity = 83/212 (39.15%), Postives = 124/212 (58.49%), Query Frame = 0
Query: 178 MDLFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQ-RRDGRGEFVLPGGRLRPGESYEDGLQRKLASKITPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
+DL+D+S Y FG K Q + S E + +R+ + +G++R V AV++VH H PH+LLLQ + +G F LPGG+ +P E+ E+ + RK+ K+ PD + E + VG+ L WY +FD + PY PAH+TKPKE ++ V+LP F +P N LAVP FE+++N YG +I++IP +LSK+HFNY
Sbjct: 10 IDLYDISNYQFGNKARQLEKD----RSVTERMERMRREFPEKGVKRTVDAVVVVHKHNHPHLLLLQIGNEKKGFFKLPGGKAQPNETDEEAMLRKVKRKLAPDEEQFQSEWK--------------VGDCLSVWYRPNFDTQMYPYKPAHITKPKEIKKLFLVTLPDQCMFQIPQNFNFLAVPFFEIYDNTKRYGPIIASIPQMLSKFHFNY 203
BLAST of Gchil8065.t1 vs. uniprot
Match: A0A7S4IQ56_9EUKA (Cleavage and polyadenylation specificity factor subunit 5 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IQ56_9EUKA) HSP 1 Score: 163 bits (412), Expect = 1.020e-44 Identity = 86/210 (40.95%), Postives = 124/210 (59.05%), Query Frame = 0
Query: 180 LFDVSKYTFGIKRAQTQSKLLQAASPRELADHLRKTYAARGLRRAVAAVMLVHDHRFPHVLLLQRRDGRGEFVLPGGRLRPGESYEDGLQRKLASKI-TPDASETPDESESRHAHHAHAAARLDVGEKLCSWYAIDFDRRYLPYVPAHVTKPKEELHIYAVSLPSSFTFAVPNNLQLLAVPIFELFNNAATYGDVISAIPSVLSKYHFNY 388
L+ ++ YTFG+K Q + A +++ Y G+RR V V++VH H PHVLLL + G F LPGGRLRPGES DGL+RKL SK+ +P A PD ++G+ LC W+ +F + PY+P H+TKPKE I+ V L F++P NL+L+AVP+F+L++N+A +G VIS+IP +L ++ F Y
Sbjct: 17 LYQLTNYTFGVKDPQLEKDTSVDAR----LQRMKQKYEKEGIRRTVEGVLVVHRHGHPHVLLL--KIGNSFFKLPGGRLRPGESAVDGLKRKLTSKLASPIADYHPD---------------WEIGDVLCEWHRPNFTKSMYPYIPCHITKPKERKTIFLVQLQEKCLFSIPKNLKLIAVPLFDLYDNSARFGPVISSIPQLLGRFTFIY 205 The following BLAST results are available for this feature:
BLAST of Gchil8065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil8065.t1 ID=Gchil8065.t1|Name=Gchil8065.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=390bpback to top |