Gchil8066.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8066.t1
Unique NameGchil8066.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length208
Homology
The following BLAST results are available for this feature:
BLAST of Gchil8066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 177..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004435_piloncontigtig00004435_pilon:935318..935941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8066.t1Gchil8066.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004435_pilon 935318..935941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8066.t1 ID=Gchil8066.t1|Name=Gchil8066.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=208bp
MGLVARSWTLLLLALTLTLALCQHGGAARLLRERRAVVGPLPLPLPQPTD
APLLADGKAALASLGLPLSAQLSAEPSPELSSEPSPELSSEPSPELSSEP
SPEVSSEPSPEVSAEASAEPLAEALAEPSQTATTEEGGAPESAATDGSGS
AATNADADVDDDDDDDEDDDGGGIDAGGVAAASALIATALIASVLVALLR
PSTVRQG*
back to top