Gchil1351.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1351.t1
Unique NameGchil1351.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length333
Homology
BLAST of Gchil1351.t1 vs. uniprot
Match: A0A2V3IMC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 99.8 bits (247), Expect = 4.070e-20
Identity = 82/327 (25.08%), Postives = 150/327 (45.87%), Query Frame = 0
Query:    1 MVLINIRAPIVTLIVAVICLVVELSFLIASLWIFQFITCRRLTNQQSITVRSQKRAISGLAVLATLMFVVLETIISVSSQAVVQTIDSLQECIQ-NKAVGIETSDFEI-EGEIIHYGCTTINGNSVTHHPGNYSLDTGNLQCAADVLYSYTI---GERQSVSWADGDSKCDFVSCLVVVLRGDMLYISVSVGAHETEAPIE----AIPTNVTFLNI-----NGEDLKRILNITMNSYVTGIQEETDIRRRALAAPVKSKCEFTQTGTQSTSIPLSVIVISSTVWILSILFFLASFAFKNKVFFDSGNPTHWASLTWHDIEASEGDEP 313
            MV I ++A  V+LI+ +I  + E+ F+ A   +     C+ L  ++ + VR+ +     +A+++ L+F+ LE I+S  S  V   +   + C+  +  + ++    E  E + I   C T+ GN      GN SL  G ++C+    Y Y I    E + +  +  +  C   +C+ V  + +  Y S   GA   +   E    A+ T + FL       + E L       +++++  + +  ++RRR      K  C F +     TS+P  ++      WI+++LFF+     + KVFFD GNP HWA      ++ +   +P
Sbjct:    1 MVTIALKAQYVSLIITIISFICEVIFIAALQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQGEFREADFIEGKCQTLRGNFNYVRVGNVSLSDGQVRCSKKAAYFYDIVSASETKKLPVSTAEVSCKGETCVFVFEQQNSTYFS---GALLPDIVAELRSGAVDTEMAFLKTELLFDSSEMLPVFAGRAVDAFLEQVNDPFELRRRVFLGSAKKNCPFVEEVIDGTSVPRQLLYSLLFAWIVALLFFVLCLVLRRKVFFDVGNPLHWAIQVQKRVDEAVKHDP 324          
BLAST of Gchil1351.t1 vs. uniprot
Match: A0A2V3IK81_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK81_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 2.290e-14
Identity = 86/344 (25.00%), Postives = 155/344 (45.06%), Query Frame = 0
Query:   13 LIVAVICLVVELSFLIASLWIFQFITCRRLTNQQSITVRSQKRAISGLAVLATLMFVVLETIISVSSQAVVQTIDSLQECIQNKAVGIETSDFEI-----EGEIIHYGCTTINGN-SVTHHPGNYSLDTGNLQCAADVLYSY---TIGERQSVSWADGDSKCDFVSCLVVVLR-------GDMLYISVSVGAHET-EAPIEAIPTNVTFLNINGEDLKRILNITMNSYVTGIQEETDIRRRALAAPVKSKCEFTQTGTQSTSIPLSVIVISSTVWILSILFFLASFAFKNKVFFDSGNPTHWA--SLTWH-------DIEASEGDEPRLMISDPNGSRRIRITG 330
            LI  VI  V E+ F  A L +     C  L   ++++V+S    I  + VLA LMFV LE ++SV +      ++S Q C++     +  ++F+I       E I +GC     N +++   G+YSLD+G +QC    L SY    +             KCD + C  +                S S+   ET +  +    TN++F   +  +L+ + ++ +  Y  GI  E ++RR   +   + +C       + T +P+ ++ +++ +  LS++ F A+   K  VFFD  +P HW+  + + H       +++ +E D   L +      R +R+ G
Sbjct:   26 LIFTVIMAVSEIVFASAVLVLHALAECHVLKKGKALSVKSNGHRIRVINVLALLMFVGLEVLLSVYTVGTDTAVNSEQNCVRLFRRNVSGTEFDILDKWANHESIFFGCLRPGLNQTISVSGGSYSLDSGWVQCNEGTLLSYRHFAVSTEMFTGRELEQKKCDEIRCAGMFFEQGSXXXXXXXXXFSHSLNVTETFQGTVAGRRTNLSFTP-SAAELEVMTDMLLTLYRMGISNEHELRRVVFSLVREQRCSMITFLRRHTVLPVWMLTLTALLCALSMVAFAAAQLGKGWVFFDMRDPAHWSRKASSPHARGGIATELDTTELDAAHLKLYGSGAQREVRVVG 368          
BLAST of Gchil1351.t1 vs. uniprot
Match: A0A2V3IN83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN83_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 1.420e-13
Identity = 77/327 (23.55%), Postives = 144/327 (44.04%), Query Frame = 0
Query:   23 ELSFLIASLWIFQFITCRRLTNQQSITVRSQKRAISGLAVLATLMFVVLETIISVSSQAVVQTIDSLQECIQ-----NKAVGIETSDFEIEGEIIHYGCTTIN-----GNSVTHHPGNYSLDTGNL--QCAADVLYSYTIGER-QSVSWADGDSKCDFVSCLVVVLRGDMLYISVSVGA----HETEAP---IEAIPTNVTFLNINGEDLKRILNITMNSYVTGIQEETDIRRRALAAPVKSKCEFTQTGTQSTSIPLSVIVISSTVWILSILFFLASFAFKNKVFFDSGNPTHWASLT-WHDIEASEGDEPRLMISDPNGSRRIRI 328
            E+  + A L I     C  L+ ++ ++++S       + V+A LMF+ LET++SV ++  +  + +  +C+Q     ++A+ +E+S    E E +   C  +        ++  +PGNYS     +   C+AD L  Y +  + + +   + +  C    C+ +  +   ++ S  + +    H  E      E IP  V  LN     L  +       Y  GI EE  IRR+   +  + +CE T    + T +P  +I I++  W  S + F  +   K+ +F++  +P HW   T W   E  +G          +G RR+ +
Sbjct:   36 EIGLISAVLVILTKKECHTLSTERPVSIKSHSLRWRLIPVVAMLMFIALETLVSVHTKTHIHHVKNSHKCVQVDLRTSEALEVESS-LNKEEEAVMLNCVKMTPAEDANFNIEVYPGNYSRSGEKIFVDCSADWLMKYKLDTKGKGILEPNAEQHCRNGFCVFLYSQESKVFFSPPLPSARFNHTNEYTGYWTEFIPGAVPSLNSTATYLLLL-------YQKGILEEIQIRRKLFMSAERGQCEMTNGSKEHTLVPYWLISITALSWFCSAILFALTRVLKSGIFYNISDPLHWTRRTYWAFNEGVDGKVTHFRSCLVDGVRRVYL 354          
BLAST of Gchil1351.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 70.5 bits (171), Expect = 7.410e-10
Identity = 85/368 (23.10%), Postives = 148/368 (40.22%), Query Frame = 0
Query:    1 MVLINIRAPIVTLIVAVICLVVELSFLIASLWIFQFITCRRLTNQQSITVRSQKRAISGLAVLATLMFVVLETIISVSSQAVVQTIDSLQECIQNKAVGIE---TSDFEIEGEIIHYGCTTINGNSVTHHPGNYSLDTGN---LQCAADVLYSYTIGERQSVSWAD----GDSKCDFV-SCLVVV-----------------------LRGDMLYISVSVGAHETEAPIE---AIPTNVTFLNINGEDLKR-ILNITMNSYVTGIQEETDIRRRALAAPVKSKCEFTQTGTQSTSIPLSVIVISSTVWILSILFFLASFAFKNKVFFDSGNPTHWASLTWHDIEASEGDEPRLMISDPNGSRRIRITG 330
            MV I +++  V+LIV +I  + EL    A L   ++  C  L   + ++VR  +     LAVLA ++F+ LE I+S  S   ++      EC+    + +    T D   E + I   C  I  +      GN+SL+      ++C    LY Y   +    +  +    G +  D V  C++                         +    +Y+S +V   E    +     IP   T +  N   L R      + +Y   + +  +IR+R      + KC F       T++PL ++      WILS L F ++   +  +F+D  +P HWA  T+  I+      P +     +G R + ++G
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDE-DFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGERLMYVSG 367          
The following BLAST results are available for this feature:
BLAST of Gchil1351.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IMC1_9FLOR4.070e-2025.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK81_9FLOR2.290e-1425.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN83_9FLOR1.420e-1323.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT05_9FLOR7.410e-1023.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..332
NoneNo IPR availableTMHMMTMhelixcoord: 260..282
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:879606..880604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1351.t1Gchil1351.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 879606..880604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1351.t1 ID=Gchil1351.t1|Name=Gchil1351.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=333bp
MVLINIRAPIVTLIVAVICLVVELSFLIASLWIFQFITCRRLTNQQSITV
RSQKRAISGLAVLATLMFVVLETIISVSSQAVVQTIDSLQECIQNKAVGI
ETSDFEIEGEIIHYGCTTINGNSVTHHPGNYSLDTGNLQCAADVLYSYTI
GERQSVSWADGDSKCDFVSCLVVVLRGDMLYISVSVGAHETEAPIEAIPT
NVTFLNINGEDLKRILNITMNSYVTGIQEETDIRRRALAAPVKSKCEFTQ
TGTQSTSIPLSVIVISSTVWILSILFFLASFAFKNKVFFDSGNPTHWASL
TWHDIEASEGDEPRLMISDPNGSRRIRITGYL*
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