Gchil1352.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1352.t1
Unique NameGchil1352.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length337
Homology
BLAST of Gchil1352.t1 vs. uniprot
Match: A0A2V3J5B4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B4_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 6.220e-22
Identity = 80/312 (25.64%), Postives = 146/312 (46.79%), Query Frame = 0
Query:    7 RAPIFGLIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHVVKIRWYRIKMYAITALAMIMFVTVECVTSVFSDAAVYRMRNTEKCFRNTAPVTHTSVGSNLFE-----GRP-IFFRCIKVDGRVLTHMAGNSSMESAAISCDRDSGYSYRIGEVTKMGRTEQMAV-HCNENEL-----CAAILLERDV-LYVSSGFKDKKPAKEEISMMPTNVSKLDKGKIDARVLSKRLVKIYESAVHMEGEIRRRLLLETTRSTCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDPMHWAK 305
            R  +  L++T+ S++ ELA L+A   F     CRSLRN   V   R +R+++  +T LA + FV +E +TS  S            C R+       ++ S+  +     GR  I   C+ V G  +    GN S+++  + C     +SY   E   +       + HC ++E      CA++ L+    L +S  F ++   + +    PT +  +  G+     ++K+L+ +Y   V  E E+RRR+L +  RS C F+ E  + T++ L   I+   +W   +  + +   +   +F+D+ + +HWA+
Sbjct:    8 RPSVTSLVITITSLVVELACLSALFIFNAVCECRSLRNGNRVSVAR-HRLRIKILTILATLTFVGLEVITSANSHTKPVTESTLSPCIRSVTKQNFDNINSSFDDQTVTNGRDNIGISCVNVGGGEVFVKNGNYSLDTLDVQCGAKPIFSYVSAEKEFLPPASPGVITHCEQDEFLNMGTCASVSLQNKTRLLISERFSEESNFEIDAEFRPTQLF-MTIGEDQLESIAKQLLTLYTIGVSDEAEVRRRILTDGIRSQCSFDAETHEFTEIKLWAFILTVIIWAMCITFFLVMLFVRRGVFYDMSNALHWAE 317          
BLAST of Gchil1352.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 88.6 bits (218), Expect = 4.490e-16
Identity = 87/329 (26.44%), Postives = 152/329 (46.20%), Query Frame = 0
Query:    1 MVLLLIRAPIFGLIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHVVKIRWYRIKMYAITALAMIMFVTVECVTSVFSDAAVYRMRNTEKCFRNTAPVTHTSVGSNLFEGRPIFFRCIKVDGRVLTHMAGNSSMESAAISCDRDSGYSYRIGEVTKMGRTEQMAVHCNENELCAAILLERD--------VLYVSSG------FKDKKPAKEEISMMPTNVSKLD-------KGKIDARVLSK---RLVKIYESAVHMEGEIRRRLLLETTRSTCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDPMHWAK 305
            MVL+ +++    LI T+IS++ EL+ L A L+  NY  C +L+   HV   R ++ +   +  +    F  +E + S +SD AV     ++ C         +       E   I   C+K +   +    GN SME+  + C   +   + +     +      AV  +EN     +L   D          Y SS       F D   A +E+SM+  + S +          + +  +L K   RL++ Y+  ++   E+RR + L + R TC+F Q   +AT+V   +++  + VW+ SLA YA++ LL+  +F+D+ +P+HWAK
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTR-HQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVS-SENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFA-DEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQF-QRTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAK 325          
BLAST of Gchil1352.t1 vs. uniprot
Match: A0A2V3IMC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 6.300e-15
Identity = 77/317 (24.29%), Postives = 134/317 (42.27%), Query Frame = 0
Query:    7 RAPIFGLIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHVVKIRWYRIKMYAITALAMIMFVTVECVTSVFSDAAVYRMRNTEKCFRNTAPVTHTSVGSNLFEGRPIFFRCIKVDGRVLTHMAGNSSMESAAISCDRDSGYSYRI--GEVTKMGRTEQMAVHCNENELCAAILLERDVLYVSSGFKDKKPAKEEISMMPTNVSKLDKGKIDAR-----------------VLSKRLVKIYESAVHMEGEIRRRLLLETTRSTCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDPMHWA 304
            +A    LI+T+IS I E+ F+AA LQ +N +    L  ++  +++R YR +   I  ++ ++F+ +E + S FSD     +  +E C      +          E   I  +C  + G       GN S+    + C + + Y Y I     TK        V C + E C  +  +++  Y S             +++P  V++L  G +D                   V + R V  +   V+   E+RRR+ L + +  C F +E    T V   ++      WI +L  + +  +L   +FFDV +P+HWA
Sbjct:    7 KAQYVSLIITIISFICEVIFIAA-LQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQGEFREADFIEGKCQTLRGNFNYVRVGNVSLSDGQVRCSKKAAYFYDIVSASETKKLPVSTAEVSC-KGETCVFVFEQQNSTYFSG------------ALLPDIVAELRSGAVDTEMAFLKTELLFDSSEMLPVFAGRAVDAFLEQVNDPFELRRRVFLGSAKKNCPFVEEVIDGTSVPRQLLYSLLFAWIVALLFFVLCLVLRRKVFFDVGNPLHWA 309          
BLAST of Gchil1352.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 4.430e-14
Identity = 91/346 (26.30%), Postives = 148/346 (42.77%), Query Frame = 0
Query:    1 MVLLLIRAPIFGLIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHVVKIRWYRIKMYAITALAMIMFVTVECVTSVFSDAAVYRMRNTEKCFRNTA-PVTHTSVGSNLFEGRPIFFRCIKVDGRVLTHMAGNSSMESAAISCDRDSGYSYRIGEVTKMGRTEQMAVHC---NENELCA------------AILLERDVLYVSSGFKDKKPAKEEISMMPTNVSKLDKGKIDARVLSKRLVKIYESAVHMEGEIRRRLLLETTRSTCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDPMHWAKYACHDARVSSRSQPVLQ-RLHNDTR 329
            MVL+ +++    LI T++S +AELA L+A L +  Y+ CR+L N   V  +R +R +  A+T  A + FV +E   S FSD A+ R   T+ C    A P+    +  +L     +   C+  +  +L  +AGN S +   I C  D  +S  I         ++  + C    E  LCA             I+L+ D+ +V       +  K  +    T +          R L +R + +    V  +  +RR +      + C F+     AT +    +   A  W  SLA +  S  +   +F+D+ DP+ WA+    D   S    PV+  R  N TR
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRV-NVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISL-RAAVVGINCLGTNTSLLWQLAGNIS-DDGEIKCGDDFLFSADIHHSPNEPVPDEHTMECILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGME---------RELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVFS-PATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTR 333          
BLAST of Gchil1352.t1 vs. uniprot
Match: A0A2V3IK81_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK81_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 1.830e-10
Identity = 75/308 (24.35%), Postives = 139/308 (45.13%), Query Frame = 0
Query:   13 LIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHV-VKIRWYRIKMYAITALAMIMFVTVECVTSVFS---DAAVYRMRNTEKCFRNTAPVTHTSVGSNLFEGRPIFFRCIKVD-GRVLTHMAGNSSMESAAISCDRDSGYSYRIGEV-TKMGRTEQMAVHCNENELCAAILLERD-------VLYVSSGFKDKKPAKEEISMMPTNVSKLDKGKIDARVLSKRLVKIYESAVHMEGEIRRRLLLETTRSTCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDPMHWAKYA 307
            LI TVI  ++E+ F +A L       C  L+  + + VK   +RI++  I  LA++MFV +E + SV++   D AV   +N  + FR     T   +         IFF C++    + ++   G+ S++S  + C+  +  SYR   V T+M    ++     +   CA +  E+            S      +  +  ++   TN+S       +  V++  L+ +Y   +  E E+RR +        C      R+ T + + ++ + A +   S+  +A ++L    +FFD+RDP HW++ A
Sbjct:   26 LIFTVIMAVSEIVFASAVLVLHALAECHVLKKGKALSVKSNGHRIRV--INVLALLMFVGLEVLLSVYTVGTDTAVNSEQNCVRLFRRNVSGTEFDILDKWANHESIFFGCLRPGLNQTISVSGGSYSLDSGWVQCNEGTLLSYRHFAVSTEMFTGRELEQKKCDEIRCAGMFFEQGSXXXXXXXXXFSHSLNVTETFQGTVAGRRTNLS-FTPSAAELEVMTDMLLTLYRMGISNEHELRRVVFSLVREQRCSMITFLRRHTVLPVWMLTLTALLCALSMVAFAAAQLGKGWVFFDMRDPAHWSRKA 330          
The following BLAST results are available for this feature:
BLAST of Gchil1352.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5B4_9FLOR6.220e-2225.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A0_9FLOR4.490e-1626.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC1_9FLOR6.300e-1524.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR4.430e-1426.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK81_9FLOR1.830e-1024.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 286..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..285
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..79
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:882096..883106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1352.t1Gchil1352.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 882096..883106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1352.t1 ID=Gchil1352.t1|Name=Gchil1352.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=337bp
MVLLLIRAPIFGLIVTVISVIAELAFLAAALQFLNYVTCRSLRNEEHVVK
IRWYRIKMYAITALAMIMFVTVECVTSVFSDAAVYRMRNTEKCFRNTAPV
THTSVGSNLFEGRPIFFRCIKVDGRVLTHMAGNSSMESAAISCDRDSGYS
YRIGEVTKMGRTEQMAVHCNENELCAAILLERDVLYVSSGFKDKKPAKEE
ISMMPTNVSKLDKGKIDARVLSKRLVKIYESAVHMEGEIRRRLLLETTRS
TCEFEQEERQATKVLLSVVIVAAAVWITSLALYAISRLLTPHIFFDVRDP
MHWAKYACHDARVSSRSQPVLQRLHNDTRGRVRVMA*
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