Gchil4416.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil4416.t1
Unique Name	Gchil4416.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	467

Homology

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BLAST of Gchil4416.t1 vs. uniprot
Match: A0A2V3IUD3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUD3_9FLOR)

HSP 1 Score: 624 bits (1609), Expect = 6.580e-221
Identity = 297/464 (64.01%), Postives = 360/464 (77.59%), Query Frame = 0

Query:    4 SMSIVIASLAVFLVSARGEIPAERQENCGSIISSVISVCSHPTLSRPDWCCNELIKWNNARCWCEPSAFDALDAVANSGNAYSFRDGFCPEAFFRPARGTIRPEFATCPPFDSVPDADASEECGIAPADLRVQRLASLESLRGDAVQNLADLGPWLGRLDALLADETVFEMVGLFRGHGRFEVKQYFMTRQGLYNFLPMTSVETANQFWRNPYTVSYSATSTVPEGTFLQQHFVSFERCSARIEKFYIVDEQYQQRYNQFWDPSSSPLMSRYIKSSAEWCTTVSERCTGETYPFVDDADCQAFYNEMKGNGQITCNKFSQAYVPQYAIHGNLIACRSFYLDLAIVEAAGACPAVGRTPSQTRCDETQCAGAAFVDPAAHSPGEAQFDEALALTCSETECTESWPSEEQIALIPVEERGKFVTSADGFTVTGSTTPIVAAGAVEAVNAEPVSAEEQFGTEG-LNV 466
            S+ ++ A  A+  VS   ++P  R+E+CG+IISSVISVCSHPTLSRPDWCCNELIKWN+ARCWCEPSAFDALD +A +GNA+SFRDGFCP  FFRPA G+IRPEFA CP F S PD D SE+C I  A LR+QR+ASL++L  D+VQNLADLGPW  R+DAL  +E   EMVGLF G GRFEVKQY +TRQ LY+FLP+ + ET+  FWRNP  VSY +  T     F QQ FV+FERCS R+E+  IVD  YQ+RY QFWDPSSS LM+RY +SS EWCTTV ERC G++YPF DDADCQAFYN+MKG GQ+TCNKFSQ Y+PQYA+HG+++ACR+FYLDLAIV+AAGACPAVG+TP+Q RCDE+QCAGA++VDP +H     QF E  +LTC+ T C E+WP++EQI  IP EER KF     GFT+T +TTP +AAG V       V+AE++F  +G LNV
Sbjct:    4 SVQLLAAFAAILAVSVHAQVPPGREESCGAIISSVISVCSHPTLSRPDWCCNELIKWNDARCWCEPSAFDALDTIAQTGNAFSFRDGFCPGTFFRPAWGSIRPEFANCPAFVSTPDTDTSEQCSIDSAQLRIQRMASLDALSTDSVQNLADLGPWFLRMDALFTEEAELEMVGLFLGRGRFEVKQYLLTRQQLYSFLPIVATETSKHFWRNPRMVSYRSLHTTSARDFTQQFFVTFERCSPRVERVNIVDNHYQRRYGQFWDPSSSQLMARYQQSSYEWCTTVRERCAGDSYPFADDADCQAFYNDMKGKGQVTCNKFSQPYIPQYAMHGDVLACRNFYLDLAIVDAAGACPAVGKTPNQFRCDESQCAGASYVDPFSHDSATPQFSENPSLTCTATSCVENWPTQEQIDEIPEEERTKFA-GGSGFTLTDATTPEIAAGGVT-----EVTAEQEFEEDGGLNV 461

The following BLAST results are available for this feature:

BLAST of Gchil4416.t1 vs. uniprot

BLAST of Gchil4416.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IUD3_9FLOR	6.580e-221	64.01	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..466
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004426_pilon	contig	tig00004426_pilon:233998..235553 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4416.t1	Gchil4416.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004426_pilon 233998..235553 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil4416.t1 ID=Gchil4416.t1|Name=Gchil4416.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=467bp
MAGSMSIVIASLAVFLVSARGEIPAERQENCGSIISSVISVCSHPTLSRP
DWCCNELIKWNNARCWCEPSAFDALDAVANSGNAYSFRDGFCPEAFFRPA
RGTIRPEFATCPPFDSVPDADASEECGIAPADLRVQRLASLESLRGDAVQ
NLADLGPWLGRLDALLADETVFEMVGLFRGHGRFEVKQYFMTRQGLYNFL
PMTSVETANQFWRNPYTVSYSATSTVPEGTFLQQHFVSFERCSARIEKFY
IVDEQYQQRYNQFWDPSSSPLMSRYIKSSAEWCTTVSERCTGETYPFVDD
ADCQAFYNEMKGNGQITCNKFSQAYVPQYAIHGNLIACRSFYLDLAIVEA
AGACPAVGRTPSQTRCDETQCAGAAFVDPAAHSPGEAQFDEALALTCSET
ECTESWPSEEQIALIPVEERGKFVTSADGFTVTGSTTPIVAAGAVEAVNA
EPVSAEEQFGTEGLNV*