Gchil4418.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4418.t1
Unique NameGchil4418.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length526
Homology
BLAST of Gchil4418.t1 vs. uniprot
Match: R7QHG5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG5_CHOCR)

HSP 1 Score: 355 bits (910), Expect = 8.440e-113
Identity = 221/472 (46.82%), Postives = 271/472 (57.42%), Query Frame = 0
Query:   15 SRRRRFAAYSLTFACMLALSLLLDLRRAAHRRRPQKLQLTLPARTSLQSLGEDDSRPHSPAAHPDPHHHTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDQELRDDVDQLIAHVDQQQHH-ASSVTNPNASLPYPHPTPXXXXXXXXXXXXXXXXXXXXXXXXX-AADHSRLDA-PAAPAPLPVNASDLDVRLNSQQYFDDAQARLARMLADSHTQPLIDENDLRTLQALQLQATRGDCEHSSDRDA-TLFKTDAEVASNLDIERSDPLWGAWCLFLGSYKTDAMRDFVTKQQLLEHRVAALREQLPDQLNLTHASSDFDPDAASLDDVITPEQQSALRANIDRILSHLREIDVRYLAALSLQATFGDCAPYAXXXXXXXXXXXXXXRLLRLLKEPLLEQTAVRRQGAQWGAWCVLQGKKRATAASHLAHRVDMLVDQLSKSEA 482
            SRRRR   YS+ FA MLA+S +LD+RRAA + R  K+QL+LP+ +SL SL   D    SP +  D H                                                          LS+QEL+DDVDQLIAHV Q++ + A++ T P + LP P   P                          AAD     A P   A     A   +VRLNS++ F  +Q RL  +LAD   +  +DENDLRTL+AL LQATRGDCE  S  +  +LFKTDAE ASN+DIER DPLWGAWCLF+GSYKTDAMRD+VTKQ+++E ++   +       N+T  +S FDP AA+LDDV+TPEQQSA+R  +D I +HLRE DVRYLAAL+LQATFGDC PY                L R L EPLL+Q  VRRQGAQWGAWCVLQGKKR  AAS L+ RVD+LV+QLSKS+A
Sbjct:   69 SRRRRLILYSVAFATMLAMSSVLDVRRAALKHRHSKVQLSLPSASSLSSLPNVDDHQESPVSAADLH------PNEKNPSVSLRPGDPYLPDADTHTANLSAPTVAKGQVAADPDQPPVVKGDPVLSEQELKDDVDQLIAHVAQEEENGAANATTPTSPLPDPPADPATENKPDPAVPVPKPVQTIANTFLGLAADPPPAAATPDGSAQPNTTADGTEVRLNSEESFSSSQKRLQVLLADDSVKRFVDENDLRTLEALALQATRGDCEQRSGSEGGSLFKTDAEAASNVDIERHDPLWGAWCLFMGSYKTDAMRDYVTKQRVIEEKILTAKGSA--DANVTAVASAFDPHAATLDDVMTPEQQSAMREKMDTIAAHLREYDVRYLAALALQATFGDCGPYGSEAVAAAKEPESTVEL-RKLAEPLLDQIVVRRQGAQWGAWCVLQGKKRTLAASELSQRVDLLVNQLSKSQA 531          
BLAST of Gchil4418.t1 vs. uniprot
Match: A0A7S1TK85_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TK85_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 1.180e-12
Identity = 73/280 (26.07%), Postives = 121/280 (43.21%), Query Frame = 0
Query:  240 DAQARLARMLADSHTQPLID---ENDLRTLQALQLQATRGDCEHSSDRDA--TLFKTDAEVASNLDIERSDPLWGAWCLFLGSYKTDAMRDFVTKQQLLE-HRVAALREQLPDQLNLTHA---SSDFDPDAASLDDV-----ITPEQQSALRANIDRILSHLRE----------------IDVRYLAALSLQATFGDCAPYAXXXXXXXXXXXXXXRLLRLLKEPLLEQTAVRRQGAQWGAWCVLQGKKRATAASHLAHRVDMLVDQLSKSEAEAEAKDA 489
            D Q + AR    S    L +   E +   +QA+ LQ + GDCE +SD +   +LFKT  E  ++ ++ER+ PLWGAWC+  G  + D M++++ K++ L+  R  AL     +  N+       +D +  AA  + +        EQ+ +    ++ I + L E                ++ RY+ AL LQ   G C+                    R   +  LE  +V+R  A WGAWC+     +  A      R   L D   K + +++  +A
Sbjct:  247 DDQFQQARERVQSQAASLAEVAGEAEYLAMQAMALQISHGDCERTSDDEEHKSLFKTATESEAD-EVERTSPLWGAWCILRGRNRLDLMKEYLAKEEYLQAQRRRALESHERELANVPAVPVVEADNNTFAARNETIHQEGKTGTEQEDSEAFGVEEIEAELLEPRTRVKELERENLVGDLEARYMEALYLQTLKGSCS--------------------RDKSKFELESLSVKRDTALWGAWCMFHDLSQEDAKVEYLRREGYLRDLKRKMDEDSKHAEA 505          
The following BLAST results are available for this feature:
BLAST of Gchil4418.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QHG5_CHOCR8.440e-11346.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TK85_9RHOD1.180e-1226.07Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..525
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:238715..240292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4418.t1Gchil4418.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 238715..240292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4418.t1 ID=Gchil4418.t1|Name=Gchil4418.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=526bp
MAPKRPDLLLDARPSRRRRFAAYSLTFACMLALSLLLDLRRAAHRRRPQK
LQLTLPARTSLQSLGEDDSRPHSPAAHPDPHHHTAPSPLPTAPPTSSSSS
SSSSSSSPSSAAAAAADHHHRPNPVPAPVPNPNPNPNPNLSDQELRDDVD
QLIAHVDQQQHHASSVTNPNASLPYPHPTPPAAAAAAAAAAAAAAAPPTA
ANTTAAADHSRLDAPAAPAPLPVNASDLDVRLNSQQYFDDAQARLARMLA
DSHTQPLIDENDLRTLQALQLQATRGDCEHSSDRDATLFKTDAEVASNLD
IERSDPLWGAWCLFLGSYKTDAMRDFVTKQQLLEHRVAALREQLPDQLNL
THASSDFDPDAASLDDVITPEQQSALRANIDRILSHLREIDVRYLAALSL
QATFGDCAPYAPPAHPDHPVDSADARLLRLLKEPLLEQTAVRRQGAQWGA
WCVLQGKKRATAASHLAHRVDMLVDQLSKSEAEAEAKDAADAAAAAAAAE
HTLAEEERRADRTLHDELGLAASTR*
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