Gchil5657.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5657.t1
Unique NameGchil5657.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length445
Homology
BLAST of Gchil5657.t1 vs. uniprot
Match: A0A2V3IU31_9FLOR (Transcriptional activator Myb n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU31_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 3.220e-87
Identity = 190/360 (52.78%), Postives = 228/360 (63.33%), Query Frame = 0
Query:   86 YISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRRHAALKLTEKQVCHTLSRSNSSPLSPHSSSARQNTTPSCPQSATPSEMSSHLNDFASSGIPSPFTVSSPITPRRDTKLQISSLVATASATQTLVCNSLHTITTSHSHSDLRLHHNKSNSALSALTSFVPSPS----TTTPETHIGSQLTTPSKTVTNTPQTNHQRVLSLHTPSQSTSRAKLSHTPVPFFFSPDKPPEHILYTQEIETDSGGTSPPIPLLDRPELHSGDNILRTCQRKPIAKKPPSRHVPTNALAALAAAASSIPLSP 441
            YIS+PPSI + NTWSRVA  LP RTGKQCRERYLNQLRPGI++DPWT  EERILH  HARLGNKWVAIA+HLPGRTDNCVKNHWNSMLRKRQRR AALK+TEK     LS+ N      H+S     +TP  PQ ATPSE+SSH+NDFASSG+PSPFTVSSPITPRRD KLQISSL+   S  + L  N L  + ++ +   LR    + N A++  T   P P       T   H   QLT P  T  N    +     S  TP +S ++A+  H      F+     + I  +Q+I+TD   +    P + + E +    +    Q+KPIAK    R +P N LAALAAAASSIPLSP
Sbjct:    2 YISRPPSITSSNTWSRVASQLPRRTGKQCRERYLNQLRPGIKKDPWTPDEERILHDVHARLGNKWVAIAKHLPGRTDNCVKNHWNSMLRKRQRREAALKVTEKHFSAKLSQLNRPVSVSHNSHLSGVSTP-YPQCATPSEISSHVNDFASSGVPSPFTVSSPITPRRDAKLQISSLIV-PSGKEMLGWNILDNVRSTPAPPPLRAPEER-NCAIAPGTMCPPPPQQIAVVNTAAVHPARQLTRPRATTHNDGLASFVDPAS--TPEKSCAQAR--HALFDKHFTRISR-DVICTSQKIDTDPRRSPRLTPPMKQTESNVAPQMFVGVQKKPIAKSFAPRDMP-NPLAALAAAASSIPLSP 352          
BLAST of Gchil5657.t1 vs. uniprot
Match: R7Q4C5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4C5_CHOCR)

HSP 1 Score: 233 bits (593), Expect = 1.160e-67
Identity = 124/198 (62.63%), Postives = 145/198 (73.23%), Query Frame = 0
Query:   66 RRSPSWTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRRHAALKLTEKQVCHTLSRSNSSPLSPHSSSARQNTTPSCPQSATPSEMSSHLNDFASSGIPSPFTVSSPITPRRDTKLQISSLVA 263
            RRS SWTP+ED +L  LV K  + PPSI A  TWSRVA  L NRTGKQCRERYLNQL+PGIRRDPW+  EERIL + HA++GNKWV IA+ LPGRTDNCVKNHWNSMLRKRQRR AAL+ TE +V  TL  +    L  H     +         ATPS +SS  +D  +SG+PSP+T SSPITP+RD+KLQIS+LVA
Sbjct:   21 RRSASWTPQEDARLVELVKKESAVPPSISASKTWSRVASQLTNRTGKQCRERYLNQLKPGIRRDPWSPEEERILRETHAKIGNKWVTIAQQLPGRTDNCVKNHWNSMLRKRQRREAALRATEAEVVATLGSAQGHKL--HHDFKSEADLSVHTGYATPSGVSSSYHDLPTSGVPSPYTASSPITPKRDSKLQISTLVA 216          
BLAST of Gchil5657.t1 vs. uniprot
Match: A0A7S2Z9L1_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9L1_9RHOD)

HSP 1 Score: 141 bits (356), Expect = 1.740e-34
Identity = 77/135 (57.04%), Postives = 90/135 (66.67%), Query Frame = 0
Query:   45 ASSSSTRPTSSAPSPPAKPCGRRSPSWTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRR 179
            AS S  R   S P+PP K    R   WT EED KL TL   Y S   ++ +   WSR+A  +  R GKQCRER+LNQL+PGIRR+ WT+ EE  LH  H  LGNKWV IA++LPGRTDN VKNHWNSM+RKR RR
Sbjct:   38 ASKSRERRGLSDPNPPKKNHTTR--PWTLEEDRKLETL---YNSMSDNMSSSKKWSRIASQMEGRKGKQCRERWLNQLKPGIRRESWTVEEEETLHDRHKELGNKWVEIAKYLPGRTDNAVKNHWNSMIRKRTRR 167          
BLAST of Gchil5657.t1 vs. uniprot
Match: A0A7S1TCY3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCY3_9RHOD)

HSP 1 Score: 137 bits (344), Expect = 2.710e-33
Identity = 63/104 (60.58%), Postives = 78/104 (75.00%), Query Frame = 0
Query:   99 WSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRRHAALKLTEKQVCHTLSRSNSSPL 202
            WS+VA  LP RTGKQCRER+LNQL+PGI+RD W+  EE +L+ FH   GN+WVAIA HLPGRTDNCVKNHWNS LRK +RR +A++  + +    LS    +PL
Sbjct:   55 WSKVARELPTRTGKQCRERWLNQLKPGIKRDAWSKEEENLLYHFHEMYGNRWVAIAEHLPGRTDNCVKNHWNSTLRKEKRRASAMRKNDLENDSALSHGQINPL 158          
BLAST of Gchil5657.t1 vs. uniprot
Match: A0A7S0T9P2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T9P2_9RHOD)

HSP 1 Score: 131 bits (330), Expect = 1.110e-31
Identity = 63/114 (55.26%), Postives = 77/114 (67.54%), Query Frame = 0
Query:   66 RRSPSWTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRR 179
            +R+ SWT  ED  LT L+        +  +   WSR+A  +  RTGKQCRER+LNQL+PGI  D WT  EE++LH+ HAR GNKWV IA HLPG+T+NCVKN WNS  RK  RR
Sbjct:    9 KRTRSWTACEDQHLTQLMRTETGDDTASASVRCWSRIASLMEGRTGKQCRERWLNQLKPGISHDAWTPAEEQLLHELHARYGNKWVQIAMHLPGKTENCVKNRWNSNRRKELRR 122          
BLAST of Gchil5657.t1 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR)

HSP 1 Score: 123 bits (308), Expect = 1.970e-30
Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   71 WTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRR 179
            WT EED ++  LV KY +K         WS +A HLP R GKQCRER+ N L P I + PWT  E+RI++Q H   GNKW  IA+ LPGRTDN +KNHWNS +R++  R
Sbjct:    8 WTQEEDNQVVELVKKYGAK--------KWSLIAQHLPGRIGKQCRERWHNHLNPDINKGPWTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHWNSTMRRKMER 108          
BLAST of Gchil5657.t1 vs. uniprot
Match: B7G6Q9_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Q9_PHATC)

HSP 1 Score: 121 bits (304), Expect = 9.150e-30
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   71 WTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKR 176
            WT +ED K+T LV KY +K         WS +A HLP R GKQCRER+ N L PGI ++ W + E+R++ + H  LGN+W  IA+ LPGRTDN +KNHWNS +R++
Sbjct:   19 WTEDEDRKVTELVQKYGAK--------KWSTIARHLPGRVGKQCRERWCNHLDPGICKEAWKLEEDRMILECHLTLGNRWAEIAKRLPGRTDNAIKNHWNSSMRRK 116          
BLAST of Gchil5657.t1 vs. uniprot
Match: A0A1X6NM75_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM75_PORUM)

HSP 1 Score: 132 bits (332), Expect = 9.360e-30
Identity = 70/135 (51.85%), Postives = 86/135 (63.70%), Query Frame = 0
Query:   66 RRSPSWTPEEDTKLTTLV-----------SKYISKPPSIIAPNT------WSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKRQRRHAAL 183
            R+S +W  +ED +L  LV           S    +  + +A +       WS+VA +LP R+GKQCRER+LNQL+PGI+R  WT  EE  L   H  LGN+WV IA  LPGRTDNCVKNHWNSMLRK+QRR AAL
Sbjct:   55 RKSATWARDEDRRLVQLVYEETVASGRVKSGISQEEAATVASSVAAHAKMWSKVASNLPGRSGKQCRERWLNQLQPGIKRGAWTEKEEETLRTAHEELGNRWVQIALRLPGRTDNCVKNHWNSMLRKQQRREAAL 189          
BLAST of Gchil5657.t1 vs. uniprot
Match: UPI0000358830 (C-Myb DNA-Binding Domain n=1 Tax=Mus musculus TaxID=10090 RepID=UPI0000358830)

HSP 1 Score: 120 bits (300), Expect = 2.270e-29
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0
Query:   71 WTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKR 176
            WT EED ++  LV KY         P  WS +A HL  R GKQCRER+ N L P +++  WT  E+RI++Q H RLGN+W  IA+ LPGRTDN +KNHWNS +R++
Sbjct:    7 WTKEEDQRVIKLVQKY--------GPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 104          
BLAST of Gchil5657.t1 vs. uniprot
Match: A9UVK9_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVK9_MONBE)

HSP 1 Score: 122 bits (306), Expect = 4.080e-29
Identity = 58/106 (54.72%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   71 WTPEEDTKLTTLVSKYISKPPSIIAPNTWSRVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKWVAIARHLPGRTDNCVKNHWNSMLRKR 176
            WT EED  +  LV KY         P  WS +A HL  R GKQCRER+ N L P I++ PWT  EER++   H RLGNKW  IA+ LPGRTDN VKNHWNS +R+R
Sbjct:   97 WTKEEDDLVIQLVDKY--------GPKRWSLIAGHLKGRIGKQCRERWHNHLHPDIKKTPWTAEEERVIMNAHLRLGNKWAEIAKLLPGRTDNSVKNHWNSTMRRR 194          
The following BLAST results are available for this feature:
BLAST of Gchil5657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU31_9FLOR3.220e-8752.78Transcriptional activator Myb n=1 Tax=Gracilariops... [more]
R7Q4C5_CHOCR1.160e-6762.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2Z9L1_9RHOD1.740e-3457.04Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TCY3_9RHOD2.710e-3360.58Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0T9P2_9RHOD1.110e-3155.26Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
D2UY60_NAEGR1.970e-3052.29Predicted protein (Fragment) n=1 Tax=Naegleria gru... [more]
B7G6Q9_PHATC9.150e-3050.94Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A1X6NM75_PORUM9.360e-3051.85Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
UPI00003588302.270e-2950.94C-Myb DNA-Binding Domain n=1 Tax=Mus musculus TaxI... [more]
A9UVK9_MONBE4.080e-2954.72Predicted protein (Fragment) n=1 Tax=Monosiga brev... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 67..124
e-value: 5.0E-14
score: 62.6
coord: 127..175
e-value: 6.8E-13
score: 58.8
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 123..173
score: 10.649979
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 70..122
score: 10.022909
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 70..120
e-value: 2.81346E-12
score: 59.1262
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 130..173
e-value: 6.82033E-11
score: 55.2742
NoneNo IPR availableGENE3D1.10.10.60coord: 70..127
e-value: 6.3E-18
score: 66.5
NoneNo IPR availableGENE3D1.10.10.60coord: 130..193
e-value: 1.3E-18
score: 68.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..235
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 53..338
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 128..173
e-value: 7.5E-12
score: 45.3
coord: 70..122
e-value: 9.3E-14
score: 51.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 66..122
score: 12.905675
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 123..177
score: 22.077997
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 66..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:584315..585649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5657.t1Gchil5657.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 584315..585649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5657.t1 ID=Gchil5657.t1|Name=Gchil5657.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=445bp
MTPHAIRPPSEQPPAVHSPPHPPLPRRRPAKPVGALPPKPASYGASSSST
RPTSSAPSPPAKPCGRRSPSWTPEEDTKLTTLVSKYISKPPSIIAPNTWS
RVAHHLPNRTGKQCRERYLNQLRPGIRRDPWTMHEERILHQFHARLGNKW
VAIARHLPGRTDNCVKNHWNSMLRKRQRRHAALKLTEKQVCHTLSRSNSS
PLSPHSSSARQNTTPSCPQSATPSEMSSHLNDFASSGIPSPFTVSSPITP
RRDTKLQISSLVATASATQTLVCNSLHTITTSHSHSDLRLHHNKSNSALS
ALTSFVPSPSTTTPETHIGSQLTTPSKTVTNTPQTNHQRVLSLHTPSQST
SRAKLSHTPVPFFFSPDKPPEHILYTQEIETDSGGTSPPIPLLDRPELHS
GDNILRTCQRKPIAKKPPSRHVPTNALAALAAAASSIPLSPPRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf