Gchil7398.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7398.t1
Unique NameGchil7398.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length954
Homology
BLAST of Gchil7398.t1 vs. uniprot
Match: R7QKF5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 644 bits (1661), Expect = 8.570e-210
Identity = 379/974 (38.91%), Postives = 561/974 (57.60%), Query Frame = 0
Query:    1 MGISNSLYADIWCAMSCTVGRRQRVENLGDGWSHFSQRANAMITELEDELAAVNRLFLYVHGVTSFSLDDDHQRLRSRAVAQLTMMSHNNNPQKALGPVNNARCSALNPVFLFSHYSRPVEKNIDAWERLVRLMQGVPTAGPVRTMTDALFASDRGYNGKETVEYITNRIGATVTGTYKRSLDYLFFFGQGATRKRHKGVVVSESGCRAVYSAKRKT-----KTGRTVEAIVYRESVSGRIAAMYHNNDRIFSARQFTLIPKA---GHEEVRKNVGRELFHLIFDR----SLSKNGTESSTTGSFGTNSMARMKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDHLEALASLISGKRFDYRPVTFLQEKNGTKKSLMSK----LLLLSHSLNIQPTFNQREHAASCLMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALELKASVENNTAQLSTPAVQDLSPSQRIETKKTELLEALYKASLTSWVMKPLVSTVQMEEGNVNESQVLKALPSFF-EDHDVLEGTQFENHKVEYP---MKKFIIEYIRTTGLVSSKRDPMMSDSPDGILCLADNEGEMHICGVEIKTMTSLNTIDAARQRRYNYAPLTYMKNVGQNEASIKQFHDLIPSGGHRTQFLHHSVCLNLNHIVFVQAKGGNGGVGEVIYVTIVHFHSSLRHNYSFILSAVRVGAFQWGGGKDSSNIPKAYDSLLQTSHASDLHSYASYYSLSQAYRLLALQHGT-LPPAQMIRPTAFVYWNYLKGGVDEFSRAMTSLCYTNVGENPIVSIIGRLLCAQVNNAAVVHRLCLARQKGHLPMNYEGAGGRSFRQLRKNVAKCFSFADYARQIAKEYGKAAEAIARTPTAASSNGNAVVPILNFLTSVKEPMYRRDIAEKYNRDEDRKQRLGDRPLHQRVKGKDTYCSLCSYGHTIKKNGKKYRKKGGARQKQWYNI 953
            MG+S + Y  +W A++    +R  V+    GW   + R  ++IT++E E+AAVNR  LY+ G T  SLDDDH R+ SRAV+ L+ +  +NNP+K LGPV N   SAL  VF   H++R  EK +  WERL  L+QG  T G ++ M DA+FA+DRGYN KET+ +++  +GA++ GT+KR + Y F FG GA  +R KG+VVSE GCRAVY A  K+     ++GR +EA +YRES SGRIAAM HNN R+F +R FT++P +   G E +      ++   IFD     SL +    +    + G+N     +V QAL+ +  +T  QS DP WFL RAF++TS T  +FL ++  + E+H+ +LA  + GK+      T  Q+ +  ++ L  K      L    L  +P  ++R   A  L   + + +    +N++  +L   +     +  K  LV   L+L+A +   T +L       +S S  +  + +++L+ L +ASL +WVMKPLVST  M+EG+ NE +VLKA+PSF  +       T+   + VEY    ++K +I +I + GLV SK   M++DSPDGIL   +   E  +C  EIKTMT+L T+  A   R  + PLT + +VG   A+ + F  LIPS  +R Q LHH+  L L H++F+ A  G+   G++IY  ++ F   +RH+Y+F L +V    F W G ++   IP+ YD+LL+ SHASD++S+ASYYSLS   R L  + G  +PPA+MIR T  V+WN+LKGGVD   R + +L  +N+ ENP+ SII RLL  QVNNAA+  RL  AR+ G LP        + + + R  V +C +F  YAR +A+E+ +      +  T A S G  + P  +           R  A++YN    +++RL     H+ V G+ TYC LCS+   I +NGK   K+ GA+Q QW ++
Sbjct:  318 MGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVFGSGAITRRSKGMVVSEKGCRAVYVATLKSNLSVRRSGRELEACLYRESCSGRIAAMIHNNRRLFKSRSFTIVPHSRFRGQEPLSVLAEEQV---IFDADRRVSLPQGEQSAKVLNTPGSN-----QVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRGAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQCLHHAATLGLKHVLFIVASSGSVTHGQIIYGCLIQFSEYIRHSYTFTLDSVLSMGFGWVG-REPKYIPREYDALLKESHASDINSFASYYSLSTGIRRLIDKDGRPMPPARMIRLTPAVFWNHLKGGVDVIYRYLKTLARSNISENPVTSIIARLLVMQVNNAALCFRLFKARELGKLPATIPMENKKGYSKTRHTVTECETFGTYARLLAREWREWRNKEQQERTEAQSVGRHLTPYFS-----------RGAADRYNHGVHQERRLSRSLDHKPVVGQSTYCVLCSWTLRIVRNGKTVTKRKGAKQIQWCSV 1271          
BLAST of Gchil7398.t1 vs. uniprot
Match: R7Q9D7_CHOCR (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 244 bits (624), Expect = 1.050e-64
Identity = 149/418 (35.65%), Postives = 232/418 (55.50%), Query Frame = 0
Query:  121 EKNIDAWERLVRLMQGVPTAGPVRTMTDALFASDRGYNGKETVEYITNRIGATVTGTYKRSLDYLFFFGQGATRKRHKGVVVSESGCRAVYSAKRKTKTG-------RTVEAIVYRESVSGRIAAMYHNNDRIFSARQFTLIPKAGHEEVRKNVGRELFHLIFDR----SLSKNGTESSTTGSFGTNSMARMKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDHLEALASLISGKRFDYRPVTFLQEKNGTKKSLMSK----LLLLSHSLNIQPTFNQREHAASCLMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALELKASVENNTAQLSTPAVQDLSPSQRIETKKTELLEALYKASLTSWVMKPLVSTVQMEEGNVNESQVLKALPSF 523
            EK I  WERLV+L+QGV T G +R M  A+FA+DRGYN K T+E+I++ +GA++ GT+KR L + F FG G   +RH+G+VVSE GCRAVY+A+ K           R VEA VYRES SGRIAA+ HNN  +F +R FT++ +  +         E   +++D     ++S      S++ +    S A+ +V Q L++V  +T +QS DP WFL RAF++TS T+  F++++A ++   +  LA L+ G           +E    ++ +  K    + +    L   P  + R   A+ L   +AT + + TK+++  +L+         + K  LV    +LK  V  +T  L     +D SP + +     ++  AL  ASL +WVMKPL++T  M EG  NE ++++A+P F
Sbjct:  425 EKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVFGDGPITRRHRGMVVSERGCRAVYTARLKEGPSSSRASNLRAVEACVYRESCSGRIAALVHNNGALFPSRCFTIVCRDSYRAESAVRKLEAALIVYDEPWKTAVSTQRPTRSSSHAIPRVS-AKSRVQQVLAQVRCLTYLQSEDPVWFLLRAFRFTSRTSFGFVQAIARDYGTRINGLAWLLQGSVLTPGTEALSEEVEEVREHIKMKWESIIAVFGLRLADLPVTSSRRTVAARLRGMSATRITSSTKSDLQEILAVFDRALDGRVPKSSLVAAVRQLKIDVAADTVDLDGSEREDASPEELLIQSAAKVSHALRDASLHAWVMKPLIATAGMREGTRNEDKIVEAIPEF 841          
BLAST of Gchil7398.t1 vs. uniprot
Match: R7QLD7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 178 bits (451), Expect = 1.080e-47
Identity = 89/164 (54.27%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    3 ISNSLYADIWCAMSCTVGRRQRVENLGDGWSHFSQRANAMITELEDELAAVNRLFLYVHGVTSFSLDDDHQRLRSRAVAQLTMMSHNNNPQKALGPVNNARCSALNPVFLFSHYSRPVEKNIDAWERLVRLMQGVPTAGPVRTMTDALFASDRGYNGKETVEYI 166
            IS S Y ++W A+S T  +R+  E    GW +     NA+IT +E ELAA+NR  ++V GVT +S+DDDH RL SRAV  LT +S   NP+KALGPVNNA CSAL   F+ SHYSRP EK    W RLV+L+QGVPT G +R M D++FASDRGYN  ET+ ++
Sbjct:   22 ISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFL 185          
BLAST of Gchil7398.t1 vs. uniprot
Match: A0A2V3ITK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 5.890e-41
Identity = 93/258 (36.05%), Postives = 144/258 (55.81%), Query Frame = 0
Query:  408 LMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALELKASVENNTAQLSTPAVQDLSPSQRIETKKTELLEALYKASLTSWVMKPLVSTVQMEEGNVNESQVLKALPSFFEDHDVLEGTQFENHKVEYPMKKFIIEYIRTTGLVSSKRDPMMSDSPDGILCLADNEGEMHICGVEIKTMTSLNTIDAARQRRYNYAPLTYMKNVGQNEASIKQFHDLIPSGGHRTQFLHHSVCLNLNHIVFVQAKGGNGGV 665
            L+SA   +   KTK E++  +S + +   ++  K ++VEK L     V+     L     ++L+  +++   K +LLE LYK SL SWVMKPLVSTV M+EG++NE QVL  L +FF+ H+V E     + K++    K+  +YIRT GL+SS+   M+SDSPD ++   D +   H+C  EIKTM ++ T +  R     +     +  VG++  +      L+ S  +R + LHH+VCL  N + FV AK    G+
Sbjct:    5 LVSAETNTPNEKTKTELVAGMSRIGHPISSTQRKGEIVEKILLFLKQVQTGEVVLVENEAEELTAEEQVIAAKKKLLEVLYKRSLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNVQEWL---STKMKGDTFKYRADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLECLHHAVCLKANKVCFVVAKVSTCGI 259          
BLAST of Gchil7398.t1 vs. uniprot
Match: R7QIE1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 142 bits (358), Expect = 2.160e-34
Identity = 95/243 (39.09%), Postives = 137/243 (56.38%), Query Frame = 0
Query:  200 VVVSESGCRAVYSAKRKTK--TGRTVEAIVYRESVSGRIAAMYHNNDRIFSARQFTLIPKAGHEEVRKNVGRELFHLIFDRSLSK--------NGTESSTTGSFGTNSMARMKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDHLEALASLISGKRF--DYRPVTFLQEKNGTKKSLMSKLLLLSHSLNIQPTFNQR---EHAASCLMSATATSLQAKTKNEILNL 427
            +VVSE GCRAVYSA + ++   GR +EA VYRES SGRIAA+Y N+   F A  + LIPK G          E   LIFD   +         N   +S T    +NS A +KV+Q L  +++ TI+QS DPGWFLGRAF++TS T+  F+ ++A N+  ++  L+ L+ GKR    + P+T   +    +K L+ K   LS ++ I     ++      A   MS TA+SL  + K+E+L+L
Sbjct:    1 MVVSEKGCRAVYSATKVSRGSKGRPIEASVYRESYSGRIAAVYSNDSTRFGAHHYCLIPKDGFRHKFDCDAEERLQLIFDNRRASAECEEEGYNLPNASVTQRALSNS-AVLKVLQLLGHLLQFTILQSEDPGWFLGRAFKFTSRTSNNFIGAIARNYICNIAGLSFLLRGKRLRAGFEPLT--SDLKNLEKDLLEKWTSLSTTIGISSREMEQPLTHSEAEIFMSETASSLAQRRKDELLSL 240          
BLAST of Gchil7398.t1 vs. uniprot
Match: A0A2V3IVJ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 1.820e-29
Identity = 78/242 (32.23%), Postives = 133/242 (54.96%), Query Frame = 0
Query:  246 IFSARQFTLIPKAGHEEVRKNVGRELFHLIFDRSLSKNGTESSTTGSFGTNSMARMKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDHLEALASLISGKRFDYR----PVTFLQEKNGTKKSLMSKLLLLSHSLNIQPTFNQREHAASCLMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALELKASVENNTAQLSTPAVQDLSPSQRIETKKTEL 483
            +F + +FTL+PKAG + +  N   E FH +++R            G++G   +AR KV Q +SEV E+  +QS DPGWFL RAFQ+TS TT  F+R+ A+N E ++ ALA ++ GK   Y     P T ++     +  L +   +L+ SL+  P+ N+ +   + L+SA   +L A TK E++  +S + +   ++L + Q+VEK L  +  V+     +     ++LS  +++   K ++
Sbjct:    1 MFKSSKFTLVPKAGCQHLISNADLEQFHRVYERQ----------EGTYGLY-LARYKVGQVVSEVFEVIALQSQDPGWFLARAFQFTSQTTSNFIRARAHNFEINVRALADIVKGKSTGYGNSHFPDTTIESLTRLELRLKNVCEVLNVSLSTAPSENEFDQMKTFLVSAETNALNAMTKAELVAAMSRIGHPVSSTLRRAQIVEKILLFQQQVQTGEVVMVENEAEELSAEEQVIAAKKKI 231          
BLAST of Gchil7398.t1 vs. uniprot
Match: A0A2V3IP41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 6.600e-22
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 0
Query:  408 LMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALELKASVENNTAQLSTPAVQDLSPSQRIETKKTELLEALYKASLTSWVMKPLVSTVQMEEGNVNESQVLKALPSFFEDHDVLEGTQFENHKVEYPMKKFIIEYIRTTGLVS 559
            L+SA   SL AKTK +++  +S + +   ++L K Q+VEK L  +  V+     L    V++LS  + +   K +LLE LYK SL SWVMKPLVSTV M+EG  NE QVL+ LP+ F+ H+V E    +       MK    +Y  TT +VS
Sbjct:    5 LVSAETNSLNAKTKAKLVAAMSRIGHPVSSTLRKAQIVEKILVFRQQVQTGELLLVENEVEELSAEEEVIAAKKKLLEVLYKRSLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFDSHNVQEWLSTK-------MKGDTHKYRATTSVVS 149          
BLAST of Gchil7398.t1 vs. uniprot
Match: A0A2V3IWD9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWD9_9FLOR)

HSP 1 Score: 89.7 bits (221), Expect = 1.770e-17
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query:  251 QFTLIPKAGHEEVRKNVGRELFHLIFDRSLSKNGTESSTTGSFGTNSMARMKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDHLEALASLISGKRFDYRPVTF 370
            +FTL+PKAG + ++ +   E FH +++R            G++G   + R KV Q +S V+ +  +QS DPGWFL RA+Q+TS TT  F+R+LA+N E ++ ALA ++ GK   Y  + F
Sbjct:    6 KFTLVPKAGCQHLKSSADLEQFHRVYERQ----------EGTYGLY-LDRYKVGQVVSGVIGVAALQSHDPGWFLVRAYQFTSQTTSNFIRALAHNSEINVRALADIVKGKSTGYGNLHF 114          
The following BLAST results are available for this feature:
BLAST of Gchil7398.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
R7QKF5_CHOCR8.570e-21038.91Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q9D7_CHOCR1.050e-6435.65EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
R7QLD7_CHOCR1.080e-4754.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ITK4_9FLOR5.890e-4136.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIE1_CHOCR2.160e-3439.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVJ7_9FLOR1.820e-2932.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP41_9FLOR6.600e-2241.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWD9_9FLOR1.770e-1739.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 463..687
e-value: 2.1E-7
score: 32.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:902632..905493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7398.t1Gchil7398.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 902632..905493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7398.t1 ID=Gchil7398.t1|Name=Gchil7398.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=954bp
MGISNSLYADIWCAMSCTVGRRQRVENLGDGWSHFSQRANAMITELEDEL
AAVNRLFLYVHGVTSFSLDDDHQRLRSRAVAQLTMMSHNNNPQKALGPVN
NARCSALNPVFLFSHYSRPVEKNIDAWERLVRLMQGVPTAGPVRTMTDAL
FASDRGYNGKETVEYITNRIGATVTGTYKRSLDYLFFFGQGATRKRHKGV
VVSESGCRAVYSAKRKTKTGRTVEAIVYRESVSGRIAAMYHNNDRIFSAR
QFTLIPKAGHEEVRKNVGRELFHLIFDRSLSKNGTESSTTGSFGTNSMAR
MKVMQALSEVVEITIMQSGDPGWFLGRAFQYTSLTTQAFLRSLANNHEDH
LEALASLISGKRFDYRPVTFLQEKNGTKKSLMSKLLLLSHSLNIQPTFNQ
REHAASCLMSATATSLQAKTKNEILNLLSSVSYRQPNSLLKRQLVEKALE
LKASVENNTAQLSTPAVQDLSPSQRIETKKTELLEALYKASLTSWVMKPL
VSTVQMEEGNVNESQVLKALPSFFEDHDVLEGTQFENHKVEYPMKKFIIE
YIRTTGLVSSKRDPMMSDSPDGILCLADNEGEMHICGVEIKTMTSLNTID
AARQRRYNYAPLTYMKNVGQNEASIKQFHDLIPSGGHRTQFLHHSVCLNL
NHIVFVQAKGGNGGVGEVIYVTIVHFHSSLRHNYSFILSAVRVGAFQWGG
GKDSSNIPKAYDSLLQTSHASDLHSYASYYSLSQAYRLLALQHGTLPPAQ
MIRPTAFVYWNYLKGGVDEFSRAMTSLCYTNVGENPIVSIIGRLLCAQVN
NAAVVHRLCLARQKGHLPMNYEGAGGRSFRQLRKNVAKCFSFADYARQIA
KEYGKAAEAIARTPTAASSNGNAVVPILNFLTSVKEPMYRRDIAEKYNRD
EDRKQRLGDRPLHQRVKGKDTYCSLCSYGHTIKKNGKKYRKKGGARQKQW
YNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011604PDDEXK-like_dom_sf