Gchil7372.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7372.t1
Unique NameGchil7372.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length979
Homology
BLAST of Gchil7372.t1 vs. uniprot
Match: A0A2V3II75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II75_9FLOR)

HSP 1 Score: 87.0 bits (214), Expect = 6.480e-14
Identity = 82/315 (26.03%), Postives = 130/315 (41.27%), Query Frame = 0
Query:  642 VWNVFHQRNMLDDVIHFMSNYGCDNYIPLLLDVILRQLEPTLSDEEILHFLRKCDWVWEAPEFNVLTDLGNDWGQRAWRLLACARTGYYGKGKEYQMFWNFPCLSGAIRARAADVANKGSDSDSESSHSSIHDESFMVAWGRKVADDEFEFTMSLNISDVGKPWEDLSPLYLKIRLLEKGGSGISPENAKRKVTARVNVIESGCGCVLGGDAPRI-GTTVSSSDGTLKCSEIGGFGFMNGGPNGLDGYSYSVMNGEVLKSWLERHTRYCGLAFHVRLHVAPRDEKNSDTSSEFSDEVVD----------CTCGYC 945
            VW VFH ++ML ++I ++   G  +Y  L+LDV+LRQLEP LSD+E++  LR+  W     E     +    W  RAW+ L  AR       +      + P +  A +    +   +            +  ES  V +     D   +F +S+   D  K    L PL   +R++      IS    K +V  R  V    CGC + G +    GT + + D  +  S +            + G S+ V++G  LK W++ HT  C +   V + +    E+ +      +DE V           C CG C
Sbjct:  259 VWTVFHAQDMLVELITYLFRMGAFDYGILVLDVLLRQLEPALSDQELITLLRRVPWQNGYAELLASRE-ALQWSSRAWQKLFHARQTLTTTDRI-----SLPLIMSAFKRALPEPGLRA-----------VRWESERVTYDA-TPDTNLQFALSVAC-DTRKS-RRLPPLQATVRVVAGDARPIS----KMRVHVRAYVTAQ-CGCDIRGKSGAFAGTELDTGDDHVMGSFVR-----------VGGVSFKVLDGSALKEWIDCHTDTCTMRLVVHVSMERERERENGVEYAATDEPVKSPWLQTWQLKCPCGEC 537          
BLAST of Gchil7372.t1 vs. uniprot
Match: A0A2V3IHF1_9FLOR (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF1_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 1.730e-10
Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   68 VHRVLLDAAGAPLRSLVSGPFKEASANTITVHERFDSFDVVRKFLHCEPINLDNVPPELPLVADRWGLTTLFRACFTHAEERARRHNDTPRIHIAELVTRFLPIMAIVDVPSRFKTYMAMRMAI 191
            +HR LL + G  LR+LV+  FKE S+ T+T+H+ FD + ++R +L+ +P+++ +V  E  +VA R+ L  LF ACF   E               +LV  +L ++++V  P  F  Y A++ ++
Sbjct:   71 IHRSLLVSTGGALRTLVTSGFKECSSKTVTLHDSFDVWKLIRTYLYRQPVDMRDVTTETVMVAHRYELVELFCACFLWIEVSGIWKGK-------DLVEDWLEVVSLVQPPRAFCEYFALQFSL 187          
The following BLAST results are available for this feature:
BLAST of Gchil7372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3II75_9FLOR6.480e-1426.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHF1_9FLOR1.730e-1033.06BTB domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 32..168
e-value: 4.6E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..607
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 956..978
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..482

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:724448..727384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7372.t1Gchil7372.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 724448..727384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7372.t1 ID=Gchil7372.t1|Name=Gchil7372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=979bp
MQPKPIRVGAWELHHHVLKPSRCLLQTHAVRLHTALQRPHDFVTFVCSSH
PPTPHPPPDDAAVGRVTVHRVLLDAAGAPLRSLVSGPFKEASANTITVHE
RFDSFDVVRKFLHCEPINLDNVPPELPLVADRWGLTTLFRACFTHAEERA
RRHNDTPRIHIAELVTRFLPIMAIVDVPSRFKTYMAMRMAIEMKELNAYF
RDNSVHIPPLCRDAVCSLRHPDGVQCRRKKSAVLTDDMIPATHVANPIAQ
PVPDVLESEESKPAEDENAPHSDAKNANASNHQPTKSHELSSNSLQTSKK
QDIGKHSTGGGNDALQDHASQASQNGHLAESDSVGGSQDEKTPSSSDDAV
DRPALEYASGEGSSEAPEKLAPRASPSLNAEKIVESTPKPAVTCALEQTS
HQSQNHEENGPSVGHAIQLDDKLSTEQRETQSTVAASSSSAEQTLSQQTR
REASAELKSNPAVNGSSSASPAEGVEEASQTTSADKAEAEHNETGNDQPD
EGNTDPCAHVDAAQPESRSSAADQTTTVSNATGDESGDGEAGSNVNADDE
VEASTAAEMNTTVENEACSIATADADFDANGNPDDVADADAGSNADDNSN
TDVESVVADSASVAASEESELPLYEIDPEESKPKEWHKTFNVWNVFHQRN
MLDDVIHFMSNYGCDNYIPLLLDVILRQLEPTLSDEEILHFLRKCDWVWE
APEFNVLTDLGNDWGQRAWRLLACARTGYYGKGKEYQMFWNFPCLSGAIR
ARAADVANKGSDSDSESSHSSIHDESFMVAWGRKVADDEFEFTMSLNISD
VGKPWEDLSPLYLKIRLLEKGGSGISPENAKRKVTARVNVIESGCGCVLG
GDAPRIGTTVSSSDGTLKCSEIGGFGFMNGGPNGLDGYSYSVMNGEVLKS
WLERHTRYCGLAFHVRLHVAPRDEKNSDTSSEFSDEVVDCTCGYCECTGC
DQHSEDDKQSNYNSDHQDDAGSSDGSDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf