Gchil5384.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5384.t1
Unique NameGchil5384.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length277
Homology
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BLAST of Gchil5384.t1 vs. uniprot
Match: A0A2V3J7R1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7R1_9FLOR)

HSP 1 Score: 451 bits (1160), Expect = 1.010e-158
Identity = 226/276 (81.88%), Postives = 251/276 (90.94%), Query Frame = 0 
Query:    1 MPTSAVPGYRQSYIEKDRCVRNSTAVKIPGVDVMQGFTLSKAEFEDLFLQTAENVDDASHTRPDFRQKPLFRRKPQRRSPNPSDSDADSDPSFRPFRSAAKLIEPNINSAEEAADYADLCRKHAMSLQRCLPPDLDGAGEFFEKAVDARAKYALFCTSENADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMMDARSARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRVAIDGLSNNLRAQERSDEVDAVVKRHFLGALD 276
            MPT+AVP YRQSYIEKDRCVRNSTAVKIPGVD+MQGFTLSK EFE+LFLQTA+NVDDA+   P  +Q+  FRRKPQR++   +++  D++PS RPFR+AAK++EP I+++EEA DYADLCRKHA SLQRCLPPD +GAGEFFEKAVDARAK+ LFCT +NADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRM+DARSARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRV ID LSNNLRAQ R+DEVD VVKRHFLGALD
Sbjct:    1 MPTAAVPAYRQSYIEKDRCVRNSTAVKIPGVDMMQGFTLSKTEFENLFLQTADNVDDATRPNPHQKQQ-RFRRKPQRKTTPLNETKTDTNPSSRPFRAAAKVVEPTISNSEEAIDYADLCRKHAASLQRCLPPDYEGAGEFFEKAVDARAKHGLFCTPDNADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMLDARSARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRVGIDSLSNNLRAQGRADEVDTVVKRHFLGALD 275
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BLAST of Gchil5384.t1 vs. uniprot
Match: A0A2V3IN04_9FLOR (AMPK1_CBM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN04_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 2.520e-29
Identity = 74/166 (44.58%), Postives = 98/166 (59.04%), Query Frame = 0 
Query:  101 KLIEPNINSAEEAADYADLCRKHAMSLQRCLPPDLDGAGEFFEKAVDARAKYALFCTSENADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMMDARSARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRVAIDGLSNNLRAQERSDEVDAV 266
            K+ EP     +E    AD  R+ A  LQ  L  D  GA E F KA+  R K+ L+CTS+NA  HV+ A+NLSK     +AE HLR    IY  +DA       D++LY+ VV+DRQ R AEAE  YR AL +Y++N +  +NV +A+  LS NLR Q R  E++AV
Sbjct:  351 KVNEPK--DIDEVNRQADNWRQMARHLQDDLC-DPTGARELFNKAIQHREKHGLWCTSQNAQVHVDLARNLSKADRMKDAELHLRLTLKIYNKIDA-GKEHVADLMLYVGVVVDRQKRRAEAEELYRKALNIYKENDIRSNNVEIAVKNLSLNLRKQNREHEIEAV 512
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BLAST of Gchil5384.t1 vs. uniprot
Match: A0A7S0BLI2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLI2_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 4.070e-7
Identity = 46/140 (32.86%), Postives = 65/140 (46.43%), Query Frame = 0 
Query:  135 LDGAGEFFEKAVDARAKYALFCTSENADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMMDARS----------ARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKN----KLSDDNVRVAIDGLSNNLRAQERS 260
            L  A E   +A  AR +Y  + T    +  +E A  L K     EAEY+LR A  ++ M  +               + DVL  + +V D+ GR  EAE +YRSAL +YR +    K+ D N  + I     NL AQ +S
Sbjct:  424 LQKAVELLRRATFARRRYGAWVTPFTIEFLLEIANMLVKMDQYDEAEYNLRQAMSVWHMKSSAKDLLPEGEKWREETFADVLKMLGIVCDKAGRRLEAEEYYRSALEIYRSHGRDVKIVDTNRLLVI-----NLCAQGKS 558
The following BLAST results are available for this feature:
BLAST of Gchil5384.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J7R1_9FLOR1.010e-15881.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN04_9FLOR2.520e-2944.58AMPK1_CBM domain-containing protein n=1 Tax=Gracil... [more]
A0A7S0BLI2_9RHOD4.070e-732.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 132..274
e-value: 2.8E-12
score: 48.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 98..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1345756..1346586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5384.t1Gchil5384.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1345756..1346586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5384.t1 ID=Gchil5384.t1|Name=Gchil5384.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=277bp
MPTSAVPGYRQSYIEKDRCVRNSTAVKIPGVDVMQGFTLSKAEFEDLFLQ
TAENVDDASHTRPDFRQKPLFRRKPQRRSPNPSDSDADSDPSFRPFRSAA
KLIEPNINSAEEAADYADLCRKHAMSLQRCLPPDLDGAGEFFEKAVDARA
KYALFCTSENADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMMDARSAR
KYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRVAIDGL
SNNLRAQERSDEVDAVVKRHFLGALD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf