Gchil5433.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5433.t1
Unique NameGchil5433.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length312
Homology
BLAST of Gchil5433.t1 vs. uniprot
Match: A0A2V3J6K6_9FLOR (Transmembrane protein 53 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K6_9FLOR)

HSP 1 Score: 368 bits (945), Expect = 5.800e-125
Identity = 191/297 (64.31%), Postives = 226/297 (76.09%), Query Frame = 0
Query:    1 MHPVEQYHKKTNTGHPVRIRIPAAASAAAAAPTAVLVGWLGASLNNLAKYAAIYEAMRYNTVALVTPPSVVFAMRPLASANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMHVHAAAAALSRAFAVRPGLLFNLLFAVVALLSWLQRVFIVDLPVVFWRDLTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDAR-VWRVPDADHVLILRKHPEKYVDVIRALNHWGINAWRARNNAPLWQLPPLP 296
            M  VE+Y KKTNTG  V IRI   +S +A  PT V++GWLGAS+ +LAKYAA+YE+M YNTV L  PPSVVFAMRP+ASA FLLS LRIL+AD RLTAGG+VFHK SNAGAT+SPHLS FFA     L++PDDQ+VVN CK AIAAVVFDSAP YMH    A AL +A  V PG+L N++ A+ AL +W QR+F++D+PV FW+ +T A YLCPEQYIYSAAD LLD  +L ALI  R+  GVD R V+RV D+DHVLILRKHPEKY ++IRALN WG+NAWR RN    W L   P
Sbjct:    1 MEGVEEYKKKTNTGDTVIIRILNPSSTSA--PTVVVLGWLGASIKHLAKYAAVYESMSYNTVCLSCPPSVVFAMRPIASAKFLLSALRILAADDRLTAGGLVFHKLSNAGATVSPHLSDFFAGASSDLVKPDDQVVVNKCKQAIAAVVFDSAPAYMHTELGAGALIQALRVPPGVLSNIVAALYALYAWFQRIFVMDVPVFFWQGVTNARYLCPEQYIYSAADRLLDSVSLEALIERRRGDGVDVRGVFRVEDSDHVLILRKHPEKYTEIIRALNEWGVNAWRRRNRVKEWTLSQEP 295          
BLAST of Gchil5433.t1 vs. uniprot
Match: A0A2G8K1F5_STIJA (Putative transmembrane protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K1F5_STIJA)

HSP 1 Score: 79.3 bits (194), Expect = 1.940e-13
Identity = 72/247 (29.15%), Postives = 114/247 (46.15%), Query Frame = 0
Query:   32 PTAVLVGWLGASLNNLAKYAAIYEAMRYNTVALVTPPSVVFAMRPLASANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFA-AHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMHVHAAAAALSRA---FAVRPGLLFNLLFAVVALLSWL--QRVFIVDLPVVFWRDLTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDARVWRV--PDADHVLILRKHPEKYVDVI 270
            P  +L+GW+G S  NLAKY+AIY++  Y T+    P S  F   P +  +  + +L +L  D  L    VVFH FSN G  +  +          PH +    QI        +A  + DSAP       A  A+  +     V   LL  L +  + +L ++  +R+F           +  +    P+ ++YS AD + D   +  +I  R+A GV+  VW+V   D++HV    KH E+Y+D +
Sbjct:   34 PAVILLGWVGCSDKNLAKYSAIYQSKGYTTIRYTAPRSKTFT-NPNSLRDIAVKLLDLLF-DLGLDENPVVFHVFSNGGIFVYRYCMELLTDGEYPHFM----QI-------KLAGSILDSAPSDPRPQTALKAVYHSRHHTPVMTTLLLMLFYTFIFILQFILPRRLFGFSSLNTLMESIEASPSKRPQLFLYSKADNICDYKRIEEVIARRQALGVE--VWQVCWEDSEHVAHFIKHKEEYIDTV 265          
BLAST of Gchil5433.t1 vs. uniprot
Match: A0A7S2FJW8_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FJW8_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 2.640e-12
Identity = 63/245 (25.71%), Postives = 103/245 (42.04%), Query Frame = 0
Query:   35 VLVGWLGASLNNLAKYAAIYEAM-----RYNTVALVTPP-----SVVFAMRPLA---SANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMHVHAAAAALSRAFAVRPGLLFNLLFAVVALLSWLQRVFIVDLPVVFWRDLTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDARVWRVPDADHVLILRKHPEKY 266
            +L+GW G  + +L+KY  + E +        +  ++TP      +V F  R      +   L  V   L+  P  T     F+ FSN  A +   +          L   ++       +  + +V++DSAPCYMH+     A++      P      L A++  L  L   F +  P  FWR L   +  CP+ +++S  D L D + +  L+  R+  GVD          HV  LR+ PE+Y
Sbjct:   22 LLMGWYGCHMRHLSKYCEVLEKISNAKSNRKSPLVITPHVCPGYAVFFPFRVFRIKYAHQMLAMVTSFLNEHPNNTW---TFYGFSNGAAFVYREIIEL-------LFDKNNTGKYELARRQLKSVIYDSAPCYMHISTGLTAITEGVKSTP------LKALMGALFLLMVPFNIGKPKAFWRALQEDATRCPQLFLFSDVDHLCDAEHIKRLVDTRRKLGVDVTAKNFGQTKHVQHLREAPEEY 250          
BLAST of Gchil5433.t1 vs. uniprot
Match: A0A7M7Q6Y2_NASVI (Uncharacterized protein n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7Q6Y2_NASVI)

HSP 1 Score: 67.0 bits (162), Expect = 5.390e-9
Identity = 67/250 (26.80%), Postives = 101/250 (40.40%), Query Frame = 0
Query:   32 PTAVLVGWLGASLNNLAKYAAIYEAMRYNTVALVTPPSVVFAMR---PLASANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMHVHAAAAALSRAFAVRPGLLFNLLFAVVALLSWLQRVFIVDLPVVFWRD--------LTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDARVWRVPDADHVLILRKHPEKYVDVI 270
            P  VL+GW G     LAKY+AIYE     T+    P   VF  +   P  S   L+ ++R   +D       V+FH FSN GAT   H+SR     G  L               +  V+FDS+P    V +   AL       P     + FA+    S++    I+    +  ++        LT   Y  P+ ++YS  D L+    +      R  RGV  ++ +   + HV  L  + + YV  +
Sbjct:   42 PLVVLLGWAGCQDKYLAKYSAIYEERSCITLRCTAPMEYVFWRQDRLPRVSRR-LIQLIREKCSDEH----PVIFHVFSNGGATFYHHISRAMQQAGSPL--------------KVKGVIFDSSPGENRVSSLFKALKAIIGGHPLTSIPISFALTLFFSFVWYFEIIIFRALGRKEVIKTDPISLTEEPYSWPQIFLYSDVDSLIRASDVEKFASRRAERGVRTQLVQFTGSPHVKHLNTYRDVYVSTV 272          
BLAST of Gchil5433.t1 vs. uniprot
Match: UPI001D087714 (transmembrane protein 53-like n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D087714)

HSP 1 Score: 66.6 bits (161), Expect = 5.910e-9
Identity = 61/238 (25.63%), Postives = 100/238 (42.02%), Query Frame = 0
Query:   32 PTAVLVGWLGASLNNLAKYAAIYEAMRYNTVALVTPPSVVFAMRP--LASANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMHVHAAAAALSRAFAVRP--GLLFNLLFAVVALLSWL---------QRVFIVDLPVVFWRDLTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDARVWRVPDADHV 256
            P  +L GW+G++   L+ Y+ IYEA    TV  +   + +F  +   +  +  ++ V+  LS   R     ++ H FSN G  L  H                + +  +     I  V+FDSAPC   +  A   +       P   L   L+  ++ L  W+         +R  I   P+     L +    CP+ +IY+  D ++D + +   I+ RKA GVD  V R  D +HV
Sbjct:   41 PVIILFGWVGSTDRYLSIYSRIYEAKGLMTVRFMVSMTSIFLWKHHIIPISEKMVRVIEDLSLGDR----PIIIHCFSNGGTYLYRHFM--------------EAVESSKTPIKIKGVIFDSAPCRRTILHAFRGIRSTVRQNPFLNLPITLILFLILLSVWVVEFIKRYLFRRKIIQFKPM---EHLLQEENRCPQHFIYTTCDKVIDVEDIEFFINSRKALGVDVSVKRYNDTEHV 257          
BLAST of Gchil5433.t1 vs. uniprot
Match: A4S4V4_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S4V4_OSTLU)

HSP 1 Score: 59.7 bits (143), Expect = 1.130e-6
Identity = 75/247 (30.36%), Postives = 108/247 (43.72%), Query Frame = 0
Query:   32 PTAVLVGWLGASLNNLAKYAAIYEAMRYNTVALVTPPSVVFAMRPLASANFLLSVLRILSADPRLTAGGVVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFDSAPCYMH----VHAAAAALSRAFAVRPGLLFNLLFAVVALLSWL--QRVF---IVDLPVVFWRDLTRASYL--CPEQYIYSAADPLLDPDALHALIHLRKAR-GVDARVWRVPDADHVLILRKHPEKY 266
            P A+ VGW GASL ++ KYAA+Y     + VA + PPS    + P A   +   +LR L+   R   G  V H  SN G   + +L    AA+G             T       VVFD AP  +       A AA +  A A      +  +FA     SWL  +RV    ++ +  ++ +     S L  CP  ++YS AD L+ P  + A   LR+ + G  + + +  DA H  I R   E Y
Sbjct:   22 PLAICVGWFGASLKHVKKYAAMYVDANCDAVA-IAPPSAAMLV-PAAVDAYADVILRALARHVR---GKCVVHVASNGGFIFAGNLM-LKAANG--------DATARTIFERTKGVVFDCAPGNLRPDIVARAFAAVVGGASATSEPSPYFEVFA-----SWLLGRRVLSERLLRIDELWGKAGAPESILLRCPSMFMYSEADVLISPREIEAFATLRQDQTGHRSTLHKYDDAGHCEIGRDDYEDY 249          
The following BLAST results are available for this feature:
BLAST of Gchil5433.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J6K6_9FLOR5.800e-12564.31Transmembrane protein 53 n=1 Tax=Gracilariopsis ch... [more]
A0A2G8K1F5_STIJA1.940e-1329.15Putative transmembrane protein n=1 Tax=Stichopus j... [more]
A0A7S2FJW8_9CHLO2.640e-1225.71Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
A0A7M7Q6Y2_NASVI5.390e-926.80Uncharacterized protein n=1 Tax=Nasonia vitripenni... [more]
UPI001D0877145.910e-925.63transmembrane protein 53-like n=1 Tax=Coccinella s... [more]
A4S4V4_OSTLU1.130e-630.36Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008547Protein of unknown function DUF829, TMEM53PFAMPF05705DUF829coord: 32..270
e-value: 9.4E-27
score: 94.4
IPR008547Protein of unknown function DUF829, TMEM53PANTHERPTHR12265UNCHARACTERIZEDcoord: 25..270
NoneNo IPR availablePANTHERPTHR12265:SF0TRANSMEMBRANE PROTEIN 53coord: 25..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..87
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 14..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1709452..1710387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5433.t1Gchil5433.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1709452..1710387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5433.t1 ID=Gchil5433.t1|Name=Gchil5433.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=312bp
MHPVEQYHKKTNTGHPVRIRIPAAASAAAAAPTAVLVGWLGASLNNLAKY
AAIYEAMRYNTVALVTPPSVVFAMRPLASANFLLSVLRILSADPRLTAGG
VVFHKFSNAGATLSPHLSRFFAAHGPHLLRPDDQIVVNTCKHAIAAVVFD
SAPCYMHVHAAAAALSRAFAVRPGLLFNLLFAVVALLSWLQRVFIVDLPV
VFWRDLTRASYLCPEQYIYSAADPLLDPDALHALIHLRKARGVDARVWRV
PDADHVLILRKHPEKYVDVIRALNHWGINAWRARNNAPLWQLPPLPPQQH
QQQHQSGLYKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008547DUF829_TMEM53
IPR029058AB_hydrolase