Gchil5527.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5527.t1
Unique NameGchil5527.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length262
Homology
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BLAST of Gchil5527.t1 vs. uniprot
Match: A0A2V3J721_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J721_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 5.790e-11
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:  122 SFLSLRRCPFAPDVKLVLPVARCFAREFASLLFAFGDARFCVRETLELVEDCVRDE 177
            S L+L    F PDVK V+P  R FA+EF  LLFAFGDARFC R+TLELVED VR E
Sbjct:   77 SALTLLGSSFHPDVKYVVPNHRVFAQEFQDLLFAFGDARFCARDTLELVEDAVRTE 132
The following BLAST results are available for this feature:
BLAST of Gchil5527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J721_9FLOR5.790e-1166.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..261
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..228
NoneNo IPR availableTMHMMTMhelixcoord: 228..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2334888..2336432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5527.t1Gchil5527.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2334888..2336432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5527.t1 ID=Gchil5527.t1|Name=Gchil5527.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=262bp
MNGTSKRSPQIARSPQVARSPQVARSPQVARSPQVARSPQVARSPQVARS
PQVARSPQVAHSPQVAHSPQLKRGAPASPSPSPSSPSVAAPRPRKRARHV
RARTVKRSVRRVTPAAPRLAESFLSLRRCPFAPDVKLVLPVARCFAREFA
SLLFAFGDARFCVRETLELVEDCVRDERAPHTSAPKHCRCSTTPLHFCTL
PITHHRSRCFRHAPEKCLGAQQNNSSPCVLLYIPCIILWALLNNYVPIHF
SNHSVLWKLIP*
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