Gchil5502.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5502.t1
Unique NameGchil5502.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length397
Homology
BLAST of Gchil5502.t1 vs. uniprot
Match: A0A2V3IEP9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEP9_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 3.590e-79
Identity = 154/384 (40.10%), Postives = 222/384 (57.81%), Query Frame = 0
Query:   17 LVDDYIQFHKRNRHNATRILIFRPGRTGLGDRLTVMAFAFWAASISKRLFLVDWQDPFPLSQLLQNARADVDVFFRPAVDDPKNETIGFNPSSTLFYLNSTQKAAKEHDSALFSNLKTVVLEISYR-TNLTWALIDKIFPPNVRLSYVNQVAATIPFYRVIYHRIFMLSAEMLEYQKQLSHRMRIRPTYPEHFQTFPADSSSKVTAGKGERVAQNARPYIAVHARVGAGVGEAHDGFRFA---EISRNMKSGAMCLASRAVKLAHMSGHPPLPIYLATDTPAFRGVFRQVVGNFSHGSVEVVGGDWDALH--TNAF-ELSGRPQRSLPTPKQKKALRDVCIDFVMLGHGEHIVSLYSSFPRLAQGVGTARTLTEIRNEICFKVD 393
            LV DY+ FH ++R+NATRIL+FRPG + L + L  +AFAFWAAS+S+RL LVDW++PFPL + L NA+++V++FF   +DDP+NET     S T+ +LN +  +   ++  L S+L+ VV++ +   +  +   + K  P +V+ SYV+ +     FYRV++H  F LS E   +Q+ +  RMR+RP Y             K +    +   +  RPYI VHA VG      H    F    E    MK  A CLASRAV+L+ MSG P LP+YL+TD+  FR +F + V  FS G + V+       H  T  F +  G   R+      +     + IDFV LGH EHI++L  S  RLA G+GTA TL E+R+E+C +V+
Sbjct:   78 LVRDYLHFHTQSRNNATRILVFRPGTSDLSESLVYLAFAFWAASVSRRLLLVDWREPFPLDKFLVNAKSEVNLFFHAPLDDPRNETTSGVTSKTIAFLNGSDISLFSYEPVLSSSLEVVVMQTNDTPSRFSEYFVSKYAPKDVQTSYVDNLRDNAVFYRVLFHHAFRLSDEARIHQRLMHERMRLRPVYSRRPSLTWPGFPKKQSIVSFKSYDEWNRPYIGVHADVGL----RHKQVSFVNSKEAKLRMKRTATCLASRAVRLSFMSGIPALPVYLSTDSGMFRKLFSKNVKRFSKGGMSVIKSKKKVNHAITRKFLKAIGGETRNHDLAHNQNTWASL-IDFVNLGHAEHIIALEGSVARLALGLGTAETLVELRDEVCQRVE 456          
BLAST of Gchil5502.t1 vs. uniprot
Match: A0A2V3J6A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 4.650e-13
Identity = 106/414 (25.60%), Postives = 174/414 (42.03%), Query Frame = 0
Query:    5 HLSKLQAGVFRVLVDDYIQFHKRNRH----NATRI-----LIFRPGRT--GLGDRLTVMAFAFWAASISKRLFLVDWQDPFPLSQLLQNARA---DVDVFFRPAVDDPKN-----ETIGFNPSSTLFYLNSTQKAAKEHDSALFSNLKTVVLEISYRTNLTWALIDKIFPPNVRLSYVNQVAATIPFYRVIYHRIFMLSAEMLEYQKQLSHRMRIRPTYPEHFQT----FPADSSSKVTAGKGERVAQNARP-YIAVHARVGAGVGEAHDGFRFAEISRNMKSGAMCLASRAVKLAHMSG--HPPLPIYLATDTPAFRGVFRQVVGNFSHGSVEVVGGDWDALHTNAFELSGRPQRSLPTPKQKKALRDVCIDFVMLGHGEHIVSLYSSFPRLAQGVGTARTLTEIRNEICFKV 392
            H+++L     R +  DYI +H++  H    NAT       L++R  R   G+GD +  +  ++  A ISKR+F +D + PFPLS +L +        D +  P +   ++     ++I F+   T   L+ T     E  + L   L  ++  +  +       I K  P +   S   +    IPF   I   +F  S E+             R   P    T    +P    S + +     + +N  P YI+VHARVG G  E    F         +S A C+A  AV++A      HP    ++++DT  FR +F+  V N    S +V   +W A+H N     GR Q    +P +     +  +D  +L  G+ ++ + S F  +A  +G       IR + C +V
Sbjct:   68 HMNQL----LRAITSDYIDWHRQQLHICEENATHAQTIPKLVYRSMRRNYGVGDVIRGLLHSYLIAVISKRMFFIDVERPFPLSMVLTSPNGYNFTYDRYLFPELSSYEHIQWLRKSIYFDKLDTA--LSDTPTLVDESQTVLDWELFLIIPRLYPQLE-----ISKKLPQSSGFSPTRE--EVIPF---ILKALFCPSPEL-------------RSLLPGQENTDNLVWPL---STLFSPDQNLLWRNEMPAYISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPH-HFFISSDTDHFRTLFKTEV-NRLRPSAKVYQSNWQAVHMNRV---GRSQ----SPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAITDFVGIRLKYCTRV 440          
BLAST of Gchil5502.t1 vs. uniprot
Match: A0A2V3ILT8_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 76.6 bits (187), Expect = 1.360e-11
Identity = 90/363 (24.79%), Postives = 147/363 (40.50%), Query Frame = 0
Query:   17 LVDDYIQFHKRNRHNATRILI-FRPGRTGLGDRLTVMAFAFWAASISKRLFLVDWQDPFPLSQLLQNARADVDVFFRPAVDDPKNETIGFNPSSTLFYLNSTQKAAKEHDSALFSNLKTVVLEISYRTNLTWALIDKIFPPNVRLSYVNQVAATIPFYRVIYHRIFMLSAEMLEYQKQLSHRMR--IRPTYPEHFQTFPADSSSKVTAGKGERVAQNARPYIAVHARVGAGVGEAHDGFRFAEISRNMKSGAMCLASRAVKLAHMSGHPPLPIYLATDTPAFRGVFRQVVGNFSHGSVEVVGGDWDALHTNAFELSGRPQRSLPTPKQKKALRDVCIDFVMLGHGEHIVSLYSSFPRLAQGVG 376
            LV+ Y ++H+ NR  A R+++ F     G+GDR + +  AF  AS S R+ L+DW  P+PLS     + A   + F  A  D + E       ++  Y+   Q   K H   +  +   ++      T+           P   +++ +     +P  +V     F    +++     LS      ++P  P            K    K +R  +  +P+I VHAR+GAG+GE   G RF     + +  A C    A  L     H     YLATDT  FR VF  V+      +  +   D   +HT   + +     S              ++ ++L    +IV+  SSF R+A  +G
Sbjct:  108 LVNRYAKWHRENRRKAPRLVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFTDA--DRREE----QQKASSRYICDKQCTKKLHLGHVLGSKHFIIYPQGATTS-----------PQHLVAHFSTTHPRLPLSKV-----FANLTDVVTNVHVLSSAFNAMLKPAAP-----------LKKLLEKRKRALK--QPFIGVHARLGAGLGET--GPRFGS-GHSPEQVAKCFVKSA--LGSGDTHGIRKYYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCKNNASECAS------------TMMELIVLSKSSYIVASKSSFSRVAGYIG 418          
The following BLAST results are available for this feature:
BLAST of Gchil5502.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEP9_9FLOR3.590e-7940.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6A2_9FLOR4.650e-1325.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT8_9FLOR1.360e-1124.79Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 225..389
e-value: 5.5E-7
score: 31.0
NoneNo IPR availableGENE3D3.40.50.11340coord: 31..114
e-value: 4.6E-5
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2166744..2167934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5502.t1Gchil5502.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2166744..2167934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5502.t1 ID=Gchil5502.t1|Name=Gchil5502.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=397bp
MEAPHLSKLQAGVFRVLVDDYIQFHKRNRHNATRILIFRPGRTGLGDRLT
VMAFAFWAASISKRLFLVDWQDPFPLSQLLQNARADVDVFFRPAVDDPKN
ETIGFNPSSTLFYLNSTQKAAKEHDSALFSNLKTVVLEISYRTNLTWALI
DKIFPPNVRLSYVNQVAATIPFYRVIYHRIFMLSAEMLEYQKQLSHRMRI
RPTYPEHFQTFPADSSSKVTAGKGERVAQNARPYIAVHARVGAGVGEAHD
GFRFAEISRNMKSGAMCLASRAVKLAHMSGHPPLPIYLATDTPAFRGVFR
QVVGNFSHGSVEVVGGDWDALHTNAFELSGRPQRSLPTPKQKKALRDVCI
DFVMLGHGEHIVSLYSSFPRLAQGVGTARTLTEIRNEICFKVDKWM*
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