Gchil5553.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5553.t1
Unique NameGchil5553.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length276
Homology
[Close]
BLAST of Gchil5553.t1 vs. uniprot
Match: A0A2V3J6U5_9FLOR (GARS_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U5_9FLOR)

HSP 1 Score: 289 bits (739), Expect = 2.470e-95
Identity = 142/186 (76.34%), Postives = 156/186 (83.87%), Query Frame = 0 
Query:   90 DVKAYSIADTLRDSPHLNSTLLTAMRDYFGDDGREVQDYTKRPRTENGEAMFRCVIVGSGRRELQLAKMLKQSGVIRGLYYCPDDDVACDIEMNKFAQSATVSAEKRPKDVVRFAKWCVADAVFIGPDRQHRIDREAEGELAQAKITVFPHDVSAAIADGSMDVKQCLFPLAQGEEEQRADEQLVE 275
            DV AYS+ADT++DSP LNSTL+ AMRDYFGDDGREVQDY KRP  ENGE MFRCVIVGSG RELQLA++L  S V+RGLYYCPD    CDIEMNKFAQSATVSAE RP+DVVRFAKWC+ADAVFIGPDRQ  I RE E ELA A ITVF HDVSAAIA+G+MD K+CL PLAQ E + R +EQLVE
Sbjct:   43 DVSAYSLADTVKDSPLLNSTLMNAMRDYFGDDGREVQDYMKRPLNENGEPMFRCVIVGSGERELQLARVLSGSDVMRGLYYCPDHAAVCDIEMNKFAQSATVSAETRPEDVVRFAKWCLADAVFIGPDRQRSISREVESELAHAGITVFQHDVSAAIAEGNMDAKECLLPLAQSESDTRTEEQLVE 228
The following BLAST results are available for this feature:
BLAST of Gchil5553.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6U5_9FLOR2.470e-9576.34GARS_N domain-containing protein n=1 Tax=Gracilari... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.20coord: 141..239
e-value: 5.7E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..69
IPR016185Pre-ATP-grasp domain superfamilySUPERFAMILY52440PreATP-grasp domaincoord: 141..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2392079..2392906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5553.t1Gchil5553.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2392079..2392906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5553.t1 ID=Gchil5553.t1|Name=Gchil5553.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=276bp
MRETRAFVPTMLPLRAPLRACAAKKSGGAKSDGAKSDGAKSDGAKSDGKN
VAKNGAKSSAKSSAKSSAKSGAKRVARPNMRPRRPKTPPDVKAYSIADTL
RDSPHLNSTLLTAMRDYFGDDGREVQDYTKRPRTENGEAMFRCVIVGSGR
RELQLAKMLKQSGVIRGLYYCPDDDVACDIEMNKFAQSATVSAEKRPKDV
VRFAKWCVADAVFIGPDRQHRIDREAEGELAQAKITVFPHDVSAAIADGS
MDVKQCLFPLAQGEEEQRADEQLVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016185PreATP-grasp_dom_sf