Gchil5394.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5394.t1
Unique NameGchil5394.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length237
Homology
The following BLAST results are available for this feature:
BLAST of Gchil5394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 78..101
e-value: 2.9E-4
score: 30.2
coord: 107..127
e-value: 13.0
score: 12.3
coord: 135..158
e-value: 0.0062
score: 25.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 107..127
e-value: 0.0018
score: 18.6
coord: 135..158
e-value: 0.0063
score: 16.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 137..158
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 135..163
score: 12.362104
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 78..106
score: 9.099157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 107..134
score: 11.115118
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 76..103
e-value: 1.4E-5
score: 26.9
NoneNo IPR availablePFAMPF12874zf-metcoord: 79..100
e-value: 1.2E-4
score: 22.3
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 128..175
e-value: 2.1E-7
score: 32.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 104..127
e-value: 1.6E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..60
NoneNo IPR availablePANTHERPTHR24379KRAB AND ZINC FINGER DOMAIN-CONTAININGcoord: 64..212
NoneNo IPR availablePANTHERPTHR24379:SF67BLOODY FINGERS-RELATEDcoord: 64..212
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 59..116
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 101..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1476276..1476986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5394.t1Gchil5394.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1476276..1476986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5394.t1 ID=Gchil5394.t1|Name=Gchil5394.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=237bp
MAHRSASSAHKLKMSYILNDRERSPDPSAMDVDTMPPVPASPAPFAASSA
SSSSAPMPYASPSSARHRMLVDSPDRKHRCDACDFRFKSRGDLQKHINSK
HLKIRKHVCKKCGATFTEKGNLTKHEKRESGVREFECSLCPKSFVLRDGL
TRHEKQVHGIRNPSSSRTQSLRPPSSSRQPSSFSLVASGSAGAMGATSRS
SHSQPMMLSATSSFHRSSAHSSSSSSHPKTHSRFRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf