Gchil5764.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5764.t1
Unique NameGchil5764.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length145
Homology
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A2V3ISZ8_9FLOR (60S ribosomal protein L24 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISZ8_9FLOR)

HSP 1 Score: 263 bits (672), Expect = 1.160e-88
Identity = 136/144 (94.44%), Postives = 140/144 (97.22%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGMRSKRAPAPSAKSANKMPVAQRR 144
            MVVKT+LCNYSGFRIYPGHGRRYIR+DGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGM++KR P PSAK A KMPVAQRR
Sbjct:    1 MVVKTDLCNYSGFRIYPGHGRRYIRIDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGMKTKRGPVPSAKGAQKMPVAQRR 144          
BLAST of Gchil5764.t1 vs. uniprot
Match: R7Q3B7_CHOCR (Ribosomal protein L24 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3B7_CHOCR)

HSP 1 Score: 230 bits (586), Expect = 1.550e-75
Identity = 121/145 (83.45%), Postives = 131/145 (90.34%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGMRSK-RAPAPSAKSANKMPVAQRR 144
            MVVKT+LC YSGFRIYPGHGRRYIR DGRQYVF+N+KSEASFHMKRK AKHSWTQLYRRLNKKG+QEETQRRR RRK+S+APKAVEGA LEVIKAKRNQRPEVRKAAR+AALKDIKERKK  + K R+  PS + A KMPVAQRR
Sbjct:    1 MVVKTDLCFYSGFRIYPGHGRRYIRTDGRQYVFINSKSEASFHMKRKAAKHSWTQLYRRLNKKGIQEETQRRRNRRKVSAAPKAVEGAPLEVIKAKRNQRPEVRKAARDAALKDIKERKKAAKPKTRSQIPSGRGAKKMPVAQRR 145          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A7S0ZEW3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEW3_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 1.960e-48
Identity = 82/118 (69.49%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKER 118
            MVVKTELC++SGF+IYPGHG R+IR+DG+ Y F+N KS AS  M+RK A  +WTQLYRRL+KKG  EE+ +RRTR + S+ PKAV GASLEVI+AKR Q+PEVRKAAREAALK+IK R
Sbjct:    1 MVVKTELCSFSGFKIYPGHGSRFIRLDGKHYTFLNGKSRASLVMRRKAANLNWTQLYRRLHKKGQTEESSKRRTRARRSTVPKAVVGASLEVIRAKREQKPEVRKAAREAALKEIKAR 118          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A1X6NYU8_PORUM (TRASH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYU8_PORUM)

HSP 1 Score: 160 bits (404), Expect = 8.640e-48
Identity = 81/126 (64.29%), Postives = 100/126 (79.37%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGMRSKR 126
            MVVKT++C YSGFRIYPGHG R+IRVDG+ YVF N+K EASFHMKRK AK  WT L+R+L+KKG QEE  RRR RR  +   K V GA L++IKA+R QRPE+RKAAR++ALK+ KER K  +++R
Sbjct:    1 MVVKTDVCQYSGFRIYPGHGSRFIRVDGKSYVFANSKCEASFHMKRKAAKRPWTVLFRKLHKKGAQEEITRRRARRARTVVTKPVVGAPLDIIKARRTQRPEMRKAARDSALKEAKERNKTKKAER 126          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A7S0EZX2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EZX2_9EUKA)

HSP 1 Score: 150 bits (379), Expect = 7.600e-44
Identity = 75/120 (62.50%), Postives = 96/120 (80.00%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKK 120
            MVVKTE+C+YSGFRIYPGHG +Y+R D + ++F+N KS++ FH K  P K +WT LYRR++KKG  E+TQ++  R+    APKAV GASLE+IK KRNQ+PEVR AAREAAL++IKER K
Sbjct:    1 MVVKTEVCSYSGFRIYPGHGIKYVRGDSKSFLFINRKSKSYFHQKFNPRKIAWTLLYRRMHKKGTLEDTQKKTKRKVSKGAPKAVVGASLELIKQKRNQKPEVRAAAREAALREIKERAK 120          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A5J4Z255_PORPP (60S ribosomal protein L24 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z255_PORPP)

HSP 1 Score: 145 bits (366), Expect = 2.450e-42
Identity = 72/109 (66.06%), Postives = 91/109 (83.49%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAARE 109
            MVVKTELC +SG+RIYPGHG R IRVDG+ ++F+NAKS ASF M+RK A  +WT LYRRL+KKGV E+  ++R R + ++APK +EGASLE IKAKR+Q+PEVRKAAR+
Sbjct:    1 MVVKTELCQFSGYRIYPGHGSRLIRVDGKTHIFLNAKSRASFLMRRKAANLNWTVLYRRLHKKGVTEDNSKKRVRARKATAPKPIEGASLEQIKAKRSQKPEVRKAARD 109          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A7J7IGT2_9RHOD (60S ribosomal protein L24 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGT2_9RHOD)

HSP 1 Score: 140 bits (354), Expect = 2.150e-40
Identity = 69/119 (57.98%), Postives = 96/119 (80.67%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKR-NQRPEVRKAAREAALKDIKER 118
            MVV+T++CN+SGFRIYPGHG  ++R DG+ +VF + K ++SFHM+RKPA  +WT +YRRLN+KG +E+ ++R  RR + +  K VEGAS+EV++AKR +QRP+VR AAR AALK+IK R
Sbjct:    1 MVVRTQICNFSGFRIYPGHGSTFVRSDGKVFVFASLKCKSSFHMRRKPASLNWTYIYRRLNRKGQEEQEKKRTRRRAVKTVQKPVEGASIEVLRAKRQSQRPQVRTAARAAALKEIKTR 119          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A7S0BMS9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BMS9_9RHOD)

HSP 1 Score: 140 bits (353), Expect = 4.660e-40
Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAA-LKDIKERKKGMRSKRAPAPSA 132
            MVVKTE+CN+SGF+IYPGHG R+ R D + + F+N KS+A   MKRKP K +WTQLYRR+NKKG QEET +RR R+  +   K VEGASLEVIKAKRNQ+   +    +AA L++IK RK G ++K+  AP A
Sbjct:    1 MVVKTEVCNFSGFKIYPGHGSRFARSDEKVFNFINGKSKACQKMKRKPVKLNWTQLYRRVNKKGAQEETVKRRARKVNTVVMKPVEGASLEVIKAKRNQQQRSKATGAKAANLREIKARKAGGKTKKGGAPLA 133          
BLAST of Gchil5764.t1 vs. uniprot
Match: A0A3B4XA74_SERLL (Uncharacterized protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XA74_SERLL)

HSP 1 Score: 139 bits (351), Expect = 1.120e-39
Identity = 71/129 (55.04%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQRPEVRKAAREAALKDIKERKKGMRSKRAPA 129
            MVVKT++C YSG RIYPGHG  Y+R D + + F+N KS++ F  +  P K +WTQLYRR++KKG  EE+ R++TR+   +  KAV G +L+VIKAKR+Q+PEVR AAREAAL++IKER K  +++  PA
Sbjct:    1 MVVKTDVCAYSGLRIYPGHGIFYVRADQKSFKFINRKSKSQFLQRLNPRKIAWTQLYRRMHKKGTMEESTRKKTRKVSKTTNKAVVGMTLDVIKAKRSQKPEVRAAAREAALREIKERNKAKQARAHPA 129          
BLAST of Gchil5764.t1 vs. uniprot
Match: M1VC66_CYAM1 (60S ribosomal protein L24 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VC66_CYAM1)

HSP 1 Score: 138 bits (347), Expect = 3.070e-39
Identity = 68/122 (55.74%), Postives = 97/122 (79.51%), Query Frame = 0
Query:    1 MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAKHSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQ-RPEVRKAAREAALKDIKERKKG 121
            MVV+T++CN+SGFRIYPGHG  ++R DG+ +VF N+K ++SFHM+RKPA  +WT +YRRL++KG +E+ +RR  RR + +  K VEGAS+EV++AKR   R +V+ AAR AALK+IK R++G
Sbjct:    1 MVVRTQICNFSGFRIYPGHGSTFVRSDGKVFVFANSKCKSSFHMRRKPASLNWTYIYRRLHRKGQEEQEKRRTRRRAVKTVQKPVEGASIEVLRAKRQAPRAQVKTAARAAALKEIKARQQG 122          
The following BLAST results are available for this feature:
BLAST of Gchil5764.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISZ8_9FLOR1.160e-8894.4460S ribosomal protein L24 n=1 Tax=Gracilariopsis c... [more]
R7Q3B7_CHOCR1.550e-7583.45Ribosomal protein L24 n=1 Tax=Chondrus crispus Tax... [more]
A0A7S0ZEW3_9RHOD1.960e-4869.49Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NYU8_PORUM8.640e-4864.29TRASH domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S0EZX2_9EUKA7.600e-4462.50Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A5J4Z255_PORPP2.450e-4266.0660S ribosomal protein L24 n=1 Tax=Porphyridium pur... [more]
A0A7J7IGT2_9RHOD2.150e-4057.9860S ribosomal protein L24 n=1 Tax=Cyanidiococcus y... [more]
A0A7S0BMS9_9RHOD4.660e-4057.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3B4XA74_SERLL1.120e-3955.04Uncharacterized protein n=1 Tax=Seriola lalandi do... [more]
M1VC66_CYAM13.070e-3955.7460S ribosomal protein L24 n=1 Tax=Cyanidioschyzon ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000988Ribosomal protein L24e-relatedPFAMPF01246Ribosomal_L24ecoord: 4..68
e-value: 1.2E-26
score: 92.7
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 4..134
IPR000988Ribosomal protein L24e-relatedCDDcd00472Ribosomal_L24e_L24coord: 3..56
e-value: 1.10117E-20
score: 77.6126
IPR038630Ribosomal protein L24e/L24 superfamilyGENE3D2.30.170.20Ribosomal protein L24ecoord: 3..65
e-value: 1.7E-25
score: 91.1
NoneNo IPR availableGENE3D6.10.250.1270coord: 69..138
e-value: 8.7E-17
score: 63.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..144
NoneNo IPR availablePANTHERPTHR10792:SF160S RIBOSOMAL PROTEIN L24coord: 4..134
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..58
IPR023442Ribosomal protein L24e, conserved sitePROSITEPS01073RIBOSOMAL_L24Ecoord: 10..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1480341..1480946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5764.t1Gchil5764.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1480341..1480946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5764.t1 ID=Gchil5764.t1|Name=Gchil5764.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=145bp
MVVKTELCNYSGFRIYPGHGRRYIRVDGRQYVFVNAKSEASFHMKRKPAK
HSWTQLYRRLNKKGVQEETQRRRTRRKMSSAPKAVEGASLEVIKAKRNQR
PEVRKAAREAALKDIKERKKGMRSKRAPAPSAKSANKMPVAQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_L24e-rel
IPR038630L24e/L24_sf
IPR023442Ribosomal_L24e_CS