Gchil5503.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5503.t1
Unique NameGchil5503.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length251
Homology
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 180 bits (456), Expect = 7.300e-52
Identity = 120/325 (36.92%), Postives = 157/325 (48.31%), Query Frame = 0
Query:    1 MSFFSVALSIALLALLFSPSQATEGFLGPCRTNSDCVGERACREIAFDFKDIT----------LENIDTFSDV-----VKDGCGRNAVYCNAALNAIRENIEAGNLRSVFCDDSFKCPSGRQCVGS------------------------------------------------PSGICLAKLS-LSTDGNAESGDQGDDS-----------SEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            M+  +  + +  L+ L   + A  G L PCR++S+C GER+CR  A D   I+          LEN D+ + +     +   C R+  YC        E++       + C     C  G +C+                                                   +G CLA+    ST G   S                  SE+CIA KSL HL  + L+YR H++ARVLCD+  SCATAGHMVR+RG  MMMK+YC L+G C RS+  VNSPRY RALQIPSD+P LTFTAFAARY T+AEE+VLRTAV +GL
Sbjct:    1 MNLMTARIVLVSLSALAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLSSISTIFQSAQSEDLENPDSGTVLAILQSITQSC-RDEDYCLCV--PTDEDL-------IGCSSDSDCSDGEECLADNCVADSQLEAAKEPKSCXXXXXXTVPDTICAKLTAGLLDSLAETFGFEDNGFCLARFKESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 139 bits (350), Expect = 9.440e-37
Identity = 89/234 (38.03%), Postives = 119/234 (50.85%), Query Frame = 0
Query:   19 PSQATEGFLGP-CRTNSDCVGERACREIAFDFKDITLENIDTFSDVVKDGCGRNAVYCNAALNAIRE-NIEAGNLRSVFCDDSFKCPSGRQCVGSPSGICLAKLSLSTDGNAESGDQGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            PS A  G  G  C+ NSDC   R C           L N  T  +        + + C    + +++ +          C DS    S   C    +     +L+      A +      +S+VCIAA+SLAHL +  L+Y  H  ARVLCDS  SCAT GH+V + G  MMM +YC  +  C   +M VNSPRY RA+++PS T  L FTAFAARY T+ EE++L TA+RLGL
Sbjct:   34 PSVARNGLTGDSCKNNSDCSDGRKC----------LLTNTVTEVECADKA---DTIGCECRKSEMKDCSXXXXXXXXXXCVDSSNTSSQPFCFSKKAAAKDDELTPVDGPTAPNASPAAQTSDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVS-CVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3IFS2_9FLOR (U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS2_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 7.990e-35
Identity = 69/111 (62.16%), Postives = 82/111 (73.87%), Query Frame = 0
Query:  140 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            VCI A +LAH  RN L+Y NH  ARVLCD++ SCAT GHMV Y G  MMM +YCRL   CT+ +M VNSPRY RAL+IPS++P L FTA AARY T  EEN++  A+RLGL
Sbjct:  421 VCIDANALAHFPRNSLLYANHQMARVLCDTYASCATHGHMVYYLGKPMMMSSYCRLTQ-CTQQLMYVNSPRYSRALRIPSNSPQLQFTALAARYATDIEENLMSLAIRLGL 530          
BLAST of Gchil5503.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR)

HSP 1 Score: 130 bits (327), Expect = 1.590e-34
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 0
Query:   96 CDDSFKCPSGRQCVGSPSGICLAKLSLSTDGNAESGDQGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            C     CP  ++C    +G    K+ LS D      D   D+  VCI A +L HL  + L+Y  HVS+RVLCD+F SCAT GH+VRY G  MMMK YCR++  C   ++ VNSPRY   +++PS T  L +T+FAARY +  EE  +  AVR+GL
Sbjct:    5 CSSDDDCPGEKKCTELENG---EKVCLSDDEKEVLEDVVKDA--VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYCRIVE-CEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153          
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 2.020e-29
Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = 0
Query:  111 SPSGICLAKLSLSTDGNAESGDQGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            SP G  +  ++   DG  E     +D  E+CI    L+H+    LIY +H  ARVLCD   SCAT GH+V Y+G+ MMM+ YC  I  C + +M VNSPRY RA ++ S T  L+FTAFAARY ++AEE++LR  VR+GL
Sbjct:  416 SPEGE-IPSIAEGVDGEGEPTPSPED--EICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCT-ITRCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551          
BLAST of Gchil5503.t1 vs. uniprot
Match: R7Q9R8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R8_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 1.500e-28
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0
Query:  133 QGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            QGD  S VCI A +L H+    LI+ +H  ARVLCD + SCATAGHMV+  G  MMM T+CR +G C    M VNSP+YRR   I S T  L +TAFAARY +  EE ++  AVR GL
Sbjct:  208 QGDPES-VCIDANALKHVAPRELIFESHRWARVLCDEYGSCATAGHMVKSEGKAMMMGTFCRYVG-CVEKAMMVNSPKYRRGASIRSKTKGLVYTAFAARYQSRVEELIIAAAVRWGL 323          
BLAST of Gchil5503.t1 vs. uniprot
Match: R7Q6G8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6G8_CHOCR)

HSP 1 Score: 110 bits (276), Expect = 7.720e-27
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  140 VCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            +C+ A++L + D   ++YR H  A+VLCDS +SCATA HMV +RG  MMM++YC+ +  C  + + VNSPRY++ ++I S T  L FTAFAARY T AEE  +  AVRLGL
Sbjct:   51 LCVDAEALTNADVQ-MVYRKHFYAKVLCDSERSCATAAHMVVWRGVAMMMRSYCQRVQ-CEETALHVNSPRYKKKVRIQSRTEGLQFTAFAARYGTKAEELAIGVAVRLGL 159          
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3ISB7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB7_9FLOR)

HSP 1 Score: 108 bits (270), Expect = 9.520e-25
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 0
Query:  133 QGDDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            +G   ++ C+A K L  L+RN L++  H + +VLCD   SCATAGH+V YRG  M MK+YC+ +G C+ ++M VNSPRY   L++ S +  L  T FAAR+ T  EE  L   VRLGL
Sbjct:  158 EGAVRADACVAVKHLQELERNELLFATHRTTKVLCDGKLSCATAGHIVVYRGLPMSMKSYCQHVG-CSMNMMEVNSPRYVWGLRMKSHSVELQLTVFAARFETMVEEAFLVCLVRLGL 274          
BLAST of Gchil5503.t1 vs. uniprot
Match: A0A2V3IE72_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE72_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 1.730e-21
Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  135 DDSSEVCIAAKSLAHLDRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCTRSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL 250
            D    VC   ++ +    + L++  H  A V CD+ +SC T GHMV +RG VMMM  YC + G C +  M VNSPR  R L+  S T  L +T FAA++ T  EE VL  A+RLGL
Sbjct:   47 DSPFRVCEDVRAWSAFQSHQLLFEKHGMAWVFCDANESCTTDGHMVVFRGQVMMMNKYCDIFG-CEKRSMHVNSPRNTRGLRAQSRTGGLAYTVFAAKHETRMEEGVLLVAIRLGL 161          
The following BLAST results are available for this feature:
BLAST of Gchil5503.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IDX8_9FLOR7.300e-5236.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ05_9FLOR9.440e-3738.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFS2_9FLOR7.990e-3562.16U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=... [more]
R7Q4J5_CHOCR1.590e-3445.16Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J1H7_9FLOR2.020e-2947.86Early nodulin-12A n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q9R8_CHOCR1.500e-2853.39Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q6G8_CHOCR7.720e-2751.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISB7_9FLOR9.520e-2547.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE72_9FLOR1.730e-2143.97Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2188092..2188961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5503.t1Gchil5503.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2188092..2188961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5503.t1 ID=Gchil5503.t1|Name=Gchil5503.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=251bp
MSFFSVALSIALLALLFSPSQATEGFLGPCRTNSDCVGERACREIAFDFK
DITLENIDTFSDVVKDGCGRNAVYCNAALNAIRENIEAGNLRSVFCDDSF
KCPSGRQCVGSPSGICLAKLSLSTDGNAESGDQGDDSSEVCIAAKSLAHL
DRNHLIYRNHVSARVLCDSFQSCATAGHMVRYRGDVMMMKTYCRLIGGCT
RSVMPVNSPRYRRALQIPSDTPHLTFTAFAARYVTSAEENVLRTAVRLGL
*
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