Gchil5338.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5338.t1
Unique NameGchil5338.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length252
Homology
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A2V3IZ50_9FLOR (Ribosome maturation protein SBDS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ50_9FLOR)

HSP 1 Score: 424 bits (1091), Expect = 5.100e-149
Identity = 216/251 (86.06%), Postives = 235/251 (93.63%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQLT 251
            MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNE+DLDDVLQTTSIF+NVSKGILAK KDLKDAFKTED + IVLEILRKGELQVSERERQYQT+NL NEIA IVSEKCVDP+TNRPFSVG+IERAMKDTLHYAVLPNK AKVQAQ VIK+LQ HM ISRAQMRL+L++P +RAKAVKE+LK HV  WEQE+WE DY G +LIDPGSFRVID+VLR+ET+GQGTFDVLS+AVV+DNDEQLT
Sbjct:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEKDLDDVLQTTSIFTNVSKGILAKTKDLKDAFKTEDIERIVLEILRKGELQVSERERQYQTENLSNEIARIVSEKCVDPNTNRPFSVGVIERAMKDTLHYAVLPNKTAKVQAQIVIKQLQEHMSISRAQMRLQLNLPSARAKAVKEQLKTHVNKWEQEEWEMDYVGTVLIDPGSFRVIDDVLRQETRGQGTFDVLSVAVVDDNDEQLT 251          
BLAST of Gchil5338.t1 vs. uniprot
Match: R7QJF2_CHOCR (Ribosome maturation protein SBDS n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF2_CHOCR)

HSP 1 Score: 395 bits (1016), Expect = 1.350e-137
Identity = 194/250 (77.60%), Postives = 226/250 (90.40%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MSLKQPV+QVRLTN+AVVRLKR+GKRFELACYKNKV+SWR+GNE+DLD+VLQT+S+F+NVSKG+LAK KDL DAFKTED   IVLEIL+KGELQVS RERQYQ +NLFNEIAVIVSEKCVDP T RPFSVGIIERAM+DT+HYAVLPNK AKVQAQ+VIK+LQ HM ISRAQMRL++SVP S+ KAV+EKL+ HV+ WEQE+W+ D+   +L+DPG FR+IDE LRE T+GQ TF+VLS+AVVEDNDEQL
Sbjct:    1 MSLKQPVSQVRLTNVAVVRLKRRGKRFELACYKNKVISWREGNEDDLDEVLQTSSVFTNVSKGVLAKKKDLVDAFKTEDEGAIVLEILKKGELQVSGRERQYQAENLFNEIAVIVSEKCVDPSTKRPFSVGIIERAMRDTIHYAVLPNKTAKVQAQSVIKQLQEHMSISRAQMRLQISVPSSKGKAVREKLREHVQQWEQEEWDPDFQATVLVDPGCFRIIDETLREATRGQATFEVLSLAVVEDNDEQL 250          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A7S1TIB3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIB3_9RHOD)

HSP 1 Score: 314 bits (804), Expect = 4.410e-105
Identity = 155/251 (61.75%), Postives = 205/251 (81.67%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADY-NGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MSLKQPV QVRLTN+AVVRL+RKG RFE+ACY+NKV+S+R G E+DLD+VLQ   +F+NVSKG+ A  K+LKDAF T DT+EI++EIL+KGELQVS++ER +Q D LF+EIA IV+ KCVD +TNRP  VGI+ERAMKDT+HYAV+PNK+AK QA  VI++L+ HM I RAQMRL++++P   AK +KEKL   V  WE+EDW++ Y +G+ LIDPG+FR IDE++  ETKGQG+ +V+++A V + + +L
Sbjct:   17 MSLKQPVNQVRLTNVAVVRLRRKGHRFEVACYRNKVMSYRDGTEKDLDEVLQVEMVFTNVSKGVAAPTKELKDAFGTSDTREIIMEILKKGELQVSDKERNHQLDALFSEIAHIVASKCVDRNTNRPIPVGIVERAMKDTIHYAVVPNKSAKQQALEVIRQLKEHMEIDRAQMRLQVTLPGKSAKGLKEKLDDLVSKWEEEDWQSKYFDGVCLIDPGTFREIDELVSNETKGQGSVEVVNLAAVSEGEARL 267          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A5J4YZP7_PORPP (Ribosome maturation protein SBDS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZP7_PORPP)

HSP 1 Score: 288 bits (738), Expect = 2.720e-95
Identity = 139/251 (55.38%), Postives = 197/251 (78.49%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDW-EADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MS+ QPVTQVR+TN+ VVRLKRKG+RFELACY NKV+SWR+  E+DLD+VLQ   +F+NVSKG LA  K L  AF T+D ++I+++IL KGELQVSE+ER +Q+D LF EIA +V+  CVDP+T RPF+VG+IER+MKD+LHYA  PNK+AK QA  VI++L+ H+ I RAQM + +++P   AK ++EKL+P+V + + E++  A Y+   LIDPG+FR ++++++ +TKG GT ++ S+AV+ D +E+L
Sbjct:    1 MSVFQPVTQVRMTNVVVVRLKRKGQRFELACYPNKVISWREKTEKDLDEVLQIEQVFTNVSKGTLASQKQLVAAFGTDDVKDIIIQILEKGELQVSEKERHHQSDKLFQEIATLVAGMCVDPNTKRPFTVGMIERSMKDSLHYAAQPNKSAKQQALEVIRQLKEHIEIERAQMEIHITLPGKAAKQIREKLQPYVASLDDENFGAATYSATCLIDPGNFRTVEDIIKSQTKGAGTLEIASLAVMRDTEERL 251          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A2B4SEA6_STYPI (Ribosome maturation protein SBDS n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4SEA6_STYPI)

HSP 1 Score: 286 bits (733), Expect = 1.510e-94
Identity = 144/251 (57.37%), Postives = 191/251 (76.10%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEA-DYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MS+  P  QV+LTN+AVVRLK+ GKRFE+ACYKNKV+SWR   E+D+D+VLQT ++F NVSKG +AKN DL  AF T D  EI L+IL KGELQVSE+ER  Q +++F +IA +V++KCV+P+T RP+ VG+IERAMKD +HY+V+P +  K QA  VIK+L+  M I RAQMRL L +P   AK V+EKLKPH+ T E EDW+  D   + LIDPG +R+IDE LR ET+G+GT +++S+  +E+ DE+L
Sbjct:    1 MSIFTPTNQVKLTNVAVVRLKKSGKRFEIACYKNKVMSWRNKVEKDIDEVLQTHTVFMNVSKGQVAKNDDLSRAFGTTDQTEICLQILAKGELQVSEKERNTQLESMFRDIATVVADKCVNPETKRPYPVGLIERAMKD-IHYSVIPTRTTKQQALEVIKQLKESMEIERAQMRLRLIIPNREAKKVQEKLKPHISTVESEDWQGGDLEMVCLIDPGCYRIIDETLRAETRGRGTLEMISLKDIEEGDERL 250          
BLAST of Gchil5338.t1 vs. uniprot
Match: UPI000A2A6623 (ribosome maturation protein SBDS-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6623)

HSP 1 Score: 284 bits (727), Expect = 1.080e-93
Identity = 144/247 (58.30%), Postives = 191/247 (77.33%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDND 247
            MS+  P  QV+LTN+AVVRLK  GKRFE+ACYKNKV+SWR   E+DLD+VLQT +IF+NVSKG +AKN+DLK AF TE+  EI  +IL KGELQVSE+ER  Q ++ F EIA +V++KCV+P+T RP+ VG+IERAMKD +HY+V+P ++ K QA  VI++L+  MPI RAQMRL+L +P   AK +KEKLKP + T + EDW+ D   + L+DPGS+R IDEV+R ETKG+G+ +VL++  + D D
Sbjct:    1 MSIFTPTNQVKLTNVAVVRLKSCGKRFEIACYKNKVMSWRNNVEKDLDEVLQTDTIFTNVSKGQVAKNEDLKKAFGTENKTEICTKILSKGELQVSEKERNQQLESSFREIATVVADKCVNPETKRPYPVGVIERAMKD-IHYSVIPTRSTKQQALEVIRQLKETMPIERAQMRLKLILPSKDAKRIKEKLKPLLSTIDSEDWDMDLEIVCLVDPGSYRDIDEVIRVETKGRGSLEVLNLKDIHDAD 246          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A7S0BCY2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCY2_9RHOD)

HSP 1 Score: 279 bits (714), Expect = 1.200e-91
Identity = 140/251 (55.78%), Postives = 188/251 (74.90%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEAD-YNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MSL QPV QVR+TN+AVVRLKRKGKRFE+ACYKNKVVSWR G+E DLD+V+Q  ++FSNVSKGI+A  KDL  AF TED Q+++L IL KGELQVSE+ERQ+ +D  F EIA I+++ CVDP T RP+ V +IER M++TLHY VL N++AK QA  V+K+L+ HM I RA MR+ L+ P    K +KE +      +E E++    Y    LIDPG FR IDE++++ TKGQG+ +++++AV+++  E+L
Sbjct:    1 MSLFQPVGQVRMTNVAVVRLKRKGKRFEVACYKNKVVSWRSGSETDLDEVIQVENVFSNVSKGIVANKKDLVAAFGTEDVQKVILVILEKGELQVSEKERQHHSDKTFQEIASIIADNCVDPRTQRPYPVTMIERVMRETLHYTVLSNRSAKQQALDVVKQLKQHMEIQRALMRINLTAPSKFGKQLKESISSLTTEFENENFSGRFYEATFLIDPGRFREIDELVKQTTKGQGSIEIVNIAVIQEGQERL 251          
BLAST of Gchil5338.t1 vs. uniprot
Match: UPI001B88E1FB (LOW QUALITY PROTEIN: ribosome maturation protein SBDS-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E1FB)

HSP 1 Score: 279 bits (713), Expect = 1.540e-91
Identity = 140/250 (56.00%), Postives = 191/250 (76.40%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MS+  P  Q+RLTN+A+VR+K+ GKRFE+ACYKNKVVSWR   E+D+D+VLQT ++F+NVSKG ++K  DL  AF T+D  EI  +IL KGELQVSERERQ Q ++ F +IA IV++KCV+P+T RP++VG+IERAMKD +HYAV P + AK QA  VI+ L+ HMP+ RA+MR+ L +P+  A+ ++EK+K  +   EQEDW  +   I LIDPG++R IDE++R ETKGQGT +VL++  +E+ DE L
Sbjct:    1 MSIFTPTNQIRLTNVAIVRMKKGGKRFEIACYKNKVVSWRNKIEKDIDEVLQTHTVFTNVSKGQVSKRDDLVAAFGTDDQSEICKQILSKGELQVSERERQAQLESTFRDIATIVADKCVNPETKRPYTVGLIERAMKD-VHYAVKPTRNAKQQALDVIRLLKTHMPLERARMRMRLVLPVKEARRIREKIKSLLANIEQEDWTPNMEIICLIDPGAYREIDELVRSETKGQGTVEVLNLKDIEEGDESL 249          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A0P7UQ99_SCLFO (Ribosome maturation protein SBDS n=6 Tax=Euteleostomi TaxID=117571 RepID=A0A0P7UQ99_SCLFO)

HSP 1 Score: 277 bits (709), Expect = 6.440e-91
Identity = 143/250 (57.20%), Postives = 187/250 (74.80%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MS+  P  Q+RLTN+AVVR+K+ GKRFE+ACYKNKV+SWR G E+DLD+VLQT ++F NVSKG +AK +DL  AF TED  EI  +IL KGELQVS++ERQ Q + +F +IA IV+EKCV+P+T RP++V +IERAMKD +HY+V  NK+ K QA  VI++L+  M I RA MRL   +P    K +KEKLKP +K  E ED++     + LIDPG FR IDE++R ETKG+GT +VLS+  VE+ DE+L
Sbjct:    1 MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTNTVFINVSKGQVAKKEDLSKAFGTEDLTEICKQILAKGELQVSDKERQTQLEQMFRDIATIVAEKCVNPETKRPYTVSLIERAMKD-IHYSVKANKSTKQQALEVIRQLKETMQIQRAHMRLRFILPAKEGKRLKEKLKPLLKVVESEDFDEQLEMVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGDEKL 249          
BLAST of Gchil5338.t1 vs. uniprot
Match: A0A1X7V953_AMPQE (Ribosome maturation protein SBDS n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V953_AMPQE)

HSP 1 Score: 276 bits (706), Expect = 1.840e-90
Identity = 140/250 (56.00%), Postives = 190/250 (76.00%), Query Frame = 0
Query:    1 MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDVLQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERERQYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKAAKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQEDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL 250
            MS+  P  Q+RLTN+A+VR+K+ GKRFE+ACYKNKVVSWR   E+D+D+VLQT ++F+NVSKG +AK  DL  AF TED  EI   IL KGELQ+SERERQ Q ++LF +I+ IV++KCV+PDT RP++VG+IERAMKD +HYAV P ++AK Q+  VI+ L++HMP+ RA+MRL+L +P+  A+ V+EK+   + + EQEDW      + LIDPG FR IDE++R +TKG G  +VL++  VE+ DE L
Sbjct:    1 MSIFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSKGQVAKRDDLASAFGTEDQTEICKTILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKD-VHYAVKPTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLPVKEARKVREKIVGLLASVEQEDWRPQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGDETL 249          
The following BLAST results are available for this feature:
BLAST of Gchil5338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ50_9FLOR5.100e-14986.06Ribosome maturation protein SBDS n=1 Tax=Gracilari... [more]
R7QJF2_CHOCR1.350e-13777.60Ribosome maturation protein SBDS n=1 Tax=Chondrus ... [more]
A0A7S1TIB3_9RHOD4.410e-10561.75Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YZP7_PORPP2.720e-9555.38Ribosome maturation protein SBDS n=1 Tax=Porphyrid... [more]
A0A2B4SEA6_STYPI1.510e-9457.37Ribosome maturation protein SBDS n=3 Tax=Scleracti... [more]
UPI000A2A66231.080e-9358.30ribosome maturation protein SBDS-like n=1 Tax=Exai... [more]
A0A7S0BCY2_9RHOD1.200e-9155.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001B88E1FB1.540e-9156.00LOW QUALITY PROTEIN: ribosome maturation protein S... [more]
A0A0P7UQ99_SCLFO6.440e-9157.20Ribosome maturation protein SBDS n=6 Tax=Euteleost... [more]
A0A1X7V953_AMPQE1.840e-9056.00Ribosome maturation protein SBDS n=2 Tax=Amphimedo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019783Ribosome maturation protein Sdo1/SBDS, N-terminalPFAMPF01172SBDScoord: 14..100
e-value: 3.6E-30
score: 103.9
NoneNo IPR availableGENE3D3.30.70.240coord: 172..251
e-value: 1.5E-24
score: 87.8
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 1..249
IPR002140Ribosome maturation protein Sdo1/SBDSTIGRFAMTIGR00291TIGR00291coord: 9..233
e-value: 4.4E-51
score: 171.5
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 1..94
e-value: 4.2E-38
score: 131.3
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 10..94
IPR018978Ribosome maturation protein Sdo1/SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 108..224
e-value: 6.3E-30
score: 103.5
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 98..171
e-value: 1.0E-26
score: 94.7
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 89..163
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 1..249
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1144114..1144957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5338.t1Gchil5338.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1144114..1144957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5338.t1 ID=Gchil5338.t1|Name=Gchil5338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=252bp
MSLKQPVTQVRLTNIAVVRLKRKGKRFELACYKNKVVSWRQGNEEDLDDV
LQTTSIFSNVSKGILAKNKDLKDAFKTEDTQEIVLEILRKGELQVSERER
QYQTDNLFNEIAVIVSEKCVDPDTNRPFSVGIIERAMKDTLHYAVLPNKA
AKVQAQTVIKELQNHMPISRAQMRLELSVPLSRAKAVKEKLKPHVKTWEQ
EDWEADYNGIILIDPGSFRVIDEVLREETKGQGTFDVLSMAVVEDNDEQL
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019783Ribosome_mat_Sdo1/SBDS_N
IPR002140Sdo1/SBDS
IPR036786Ribosome_mat_SBDS_N_sf
IPR018978Ribosome_mat_Sdo1/SBDS_C
IPR037188Sdo1/SBDS_central_sf
IPR039100Sdo1/SBDS-like
IPR018023Ribosome_mat_SBDS_CS