Gchil5514.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5514.t1
Unique Name	Gchil5514.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	222

Homology

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BLAST of Gchil5514.t1 vs. uniprot
Match: A0A2V3IDW9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDW9_9FLOR)

HSP 1 Score: 305 bits (780), Expect = 4.080e-103
Identity = 146/189 (77.25%), Postives = 164/189 (86.77%), Query Frame = 0

Query:   34 MQRT-DPRPTPVPGESVLSTWPNTKLFLAAGDGSAWASLAAFDGVGTLRLTTCRLLFSLTPPSTARAHLSIPLAWLRPDRLHIRRPFFDNQHIAGMLTPCELHTPDPIFSACKRMHFRLQLLDVHVNDELFHALRELIADPQRLALHTRVLRAQVDNKLVPSGKYFAFVDPTDRRYLHLATQMKHPAFP 221
            MQ T + RP+PVPGE+VLSTWPNTK FL+  + S WASLAAF GVGTLRLTTCRLLF++TPPS++RAHLSIPLAWLRP++LHIRRPFFDN+HI+G+LTPCELHTPDPIF   K M FRL+LLDV V D LF ALR+LIADPQRLALHTR LRAQVD KLVP+G +FAFVDPTD RYLHLATQM HP  P
Sbjct:    1 MQPTSEHRPSPVPGETVLSTWPNTKFFLSTTETSTWASLAAFHGVGTLRLTTCRLLFTVTPPSSSRAHLSIPLAWLRPEKLHIRRPFFDNKHISGLLTPCELHTPDPIFRFSKSMEFRLELLDVQVYDTLFFALRDLIADPQRLALHTRALRAQVDEKLVPTGNHFAFVDPTDPRYLHLATQMMHPTLP 189

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BLAST of Gchil5514.t1 vs. uniprot
Match: R7QAG4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAG4_CHOCR)

HSP 1 Score: 189 bits (481), Expect = 3.330e-56
Identity = 99/188 (52.66%), Postives = 131/188 (69.68%), Query Frame = 0

Query:   40 RPTPVPGESVLSTWPNTKLFLAAGD--GSAWASLAAFDGVGTLRLTTCRLLFSLTP-PSTARAH-LSIPLAWLRPDRLHIRRPFFDNQHIAGMLTPCEL-HT---PDPIFSAC-KRMHFRLQLLDVHVNDELFHALRELIADPQRLALHTRVLRAQVDNKLVPSGKYFAFVDPTDRRYLHLATQMKHP 218
            +P+  PGE  LS+W + K F+ A +  GS+WA LAAF G G   L+TCRL+F L P PS A  H LSIPL WLR D LHIRRPFFD++H+AG+L P ++ H+   P P+F+   K M FR+++LD  +NDEL  AL +L+ADP R+A  TRVLR  VD  L+P+  ++AF+DPT+  +LHL TQM HP
Sbjct:  108 QPSAFPGEKFLSSWHDVKFFVGASEPHGSSWAPLAAFYGFGHAHLSTCRLVFILEPRPSVAAPHHLSIPLVWLRKDHLHIRRPFFDSKHLAGVLVPADVTHSALGPSPVFATPGKPMEFRIEMLDSSMNDELAGALHDLLADPDRVAKDTRVLRKAVDKALIPTDVHYAFIDPTNPSFLHLGTQMTHP 295

The following BLAST results are available for this feature:

BLAST of Gchil5514.t1 vs. uniprot

BLAST of Gchil5514.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IDW9_9FLOR	4.080e-103	77.25	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QAG4_CHOCR	3.330e-56	52.66	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..221
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 30..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 18..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..17

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004418_pilon	contig	tig00004418_pilon:2272487..2273152 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5514.t1	Gchil5514.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004418_pilon 2272487..2273152 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5514.t1 ID=Gchil5514.t1|Name=Gchil5514.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=222bp
MMQRISASRSKSRSLRRLATPPCVCVAAAVRVSMQRTDPRPTPVPGESVL
STWPNTKLFLAAGDGSAWASLAAFDGVGTLRLTTCRLLFSLTPPSTARAH
LSIPLAWLRPDRLHIRRPFFDNQHIAGMLTPCELHTPDPIFSACKRMHFR
LQLLDVHVNDELFHALRELIADPQRLALHTRVLRAQVDNKLVPSGKYFAF
VDPTDRRYLHLATQMKHPAFP*