Gchil5499.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5499.t1
Unique NameGchil5499.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length243
Homology
BLAST of Gchil5499.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 153 bits (386), Expect = 1.980e-39
Identity = 101/266 (37.97%), Postives = 140/266 (52.63%), Query Frame = 0
Query:    3 QIAVSVHSQSSGLVTIQNHPKTVLKHL--TLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVIT------------------------EAKMDNLATTTSEEDVESWRGTVATCAEFESDRPQVLDLLREYQAMSSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            +  VSV S + G+  +   PK  ++    T M+NG+ DI     FLV ++NF  +   LPK+ VIG   P P  I                         EA   +  T   +E  +SWR  V         + +V+ LL  Y  M  G LG I+AT++RI L   ++    +PY  G K  E+   ++++M KA V EPA    SEW SP+VLV K +GS+ FCVDYRKLN++T +D+YP+PRMDE +DSLG A  F+TLD  SG
Sbjct:  195 ETVVSVQSDARGICFLL--PKRDIRSAPRTSMSNGIQDICSRVPFLVKVANFGGDEIFLPKNAVIGYAFPHPTCIISLVGEDDTNVPDLPDLVEEEEHPLEANDASEETKVQDEAPKSWRDEVDLPTLQGEWKEKVMTLLERYSHMWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREMERQEVERMLKADVIEPA---CSEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSG 455          
BLAST of Gchil5499.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 138 bits (348), Expect = 2.880e-34
Identity = 70/135 (51.85%), Postives = 97/135 (71.85%), Query Frame = 0
Query:  108 DRPQVLDLLREYQAMSSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            +R ++LD+L ++++M SG+LG +++T +RIDL    +     PY  G +   + + ++ +M KAQV EPA   +SEW SP+VLVAK +GS  FCVDYR+LNA+T RDSYP+PRMDEC+DSLG A  FTTLD  SG
Sbjct:  334 ERAKILDMLAKHRSMWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPA---TSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSG 465          
BLAST of Gchil5499.t1 vs. uniprot
Match: UPI001E1D9CF0 (uncharacterized protein LOC123544487 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9CF0)

HSP 1 Score: 125 bits (313), Expect = 3.130e-30
Identity = 80/241 (33.20%), Postives = 127/241 (52.70%), Query Frame = 0
Query:   22 PKTVLKHLTLMANGVMDIHP-NRSFLVTISNFRENPERLPKDTVIGIT-----LPA---PVVITEAKMDNLATTTSEEDV---------ESWRGTVATCAEF--ESDRPQVLDLLREYQAMSSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            P  V   L    NGV D+ P  + F   ++NF  +   + K  V+G       +P    P+   + + D +A T  + D          + W+  V + +    ++ + +++ +L  +Q M  GRLG I    +R+            PY  G    +++ +++ +M K++V EP    SS W +P+VL+ K +GS+ FCVDYR+LNAVT+ DSY +PR+D+CLDSLG+A  FTTLDA SG
Sbjct:  103 PNRVRDRLVQAKNGVHDLPPCGKMFRCLVANFSHHTVVVRKGQVVGYAEAVQEIPVCAVPISAQDGEPDLMAVTREDVDPLPANVPDLPKHWKEVVRSSSTHLPDAQKDELIQMLETHQEMWDGRLGKIDTVSHRVPTTGPPVAS--QPYRAGPSSRKLIDEEIQRMLKSEVIEPT---SSPWSAPIVLIPKPDGSIRFCVDYRRLNAVTENDSYALPRIDDCLDSLGEAQFFTTLDANSG 338          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A6B0VGV9_IXORI (RNA-directed DNA polymerase (Fragment) n=4 Tax=cellular organisms TaxID=131567 RepID=A0A6B0VGV9_IXORI)

HSP 1 Score: 116 bits (291), Expect = 4.240e-26
Identity = 78/248 (31.45%), Postives = 124/248 (50.00%), Query Frame = 0
Query:    4 IAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATCAEFESD-------RPQVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            + +     + GL  ++   + +L+    +A GV ++   R  +  ++NFR+  + L K T +G          E   D+ A     ED    + T  T +E + D       R Q+ D+L E+     +S RL      ++RI   +D     Q PY    K  E +  Q+ +M    + +P+   SS W SP++LV KK+G++ FCVDYR LNAVTK+D YP+PR+D+ LD L     F+++D KSG
Sbjct:  212 VPIGTEEATCGLALLEGSVQLLLERGIDIARGVTELQDGR-IVALVTNFRQESQHLTKGTAVGY--------VEEIQDSAAIAVISEDTSPTQHTGTTPSELDIDPSLPAPQRRQLTDVLAEFSECFATSSRLRQTTVAKHRIVTDDDVPPIHQSPYRVSVKERETIQKQVREMLDDDIIQPS---SSPWASPVMLVKKKDGTLRFCVDYRWLNAVTKKDVYPLPRIDDTLDRLRHTRYFSSMDLKSG 447          
BLAST of Gchil5499.t1 vs. uniprot
Match: R7QHJ7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHJ7_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 4.840e-25
Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 0
Query:  122 MSSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKA 231
            M +G+LG I AT++RI+L+  AR+ ++ PY  G    E    ++D+M +A V EPA   ++EW SP+V V KK G++ FCVDYR LNAVT RDSYP+ RMDEC++SLG A
Sbjct:    1 MWTGQLGKIGATKHRIELEPGARQIYKAPYPAGPTAREKEKTEIDRMLRAGVIEPA---TAEWASPVVFVRKKEGTMRFCVDYRTLNAVTVRDSYPLLRMDECINSLGDA 107          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A4D5RZ78_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RZ78_IXOSC)

HSP 1 Score: 112 bits (280), Expect = 5.990e-25
Identity = 72/218 (33.03%), Postives = 117/218 (53.67%), Query Frame = 0
Query:   32 MANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATCAEFESDRP-----QVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            +A GV ++   R+  V ++NFR   + L K   +G       V        +A  T E       G+     + +   P     Q+++LL EY+    +S ++      ++RI  ++DAR   + PY    K  E++ +Q+ +M    + +P+   SS W SP+VLV KK+G++ FCVDYR+LNAVTK+D YP+PR+D+ LD L  +  F+++D KSG
Sbjct:  240 VARGVAELQDGRT-AVLVTNFRNETQHLTKGAAVGH------VEDLRNSAEIAAITDESSPPQQDGSSPAQLDIDPKLPDPKRRQLMNLLAEYRDCFATSSKVRQTAVAKHRIITEDDARPVHRSPYRVSVKEREVIQEQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNAVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 447          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A4D5RYE1_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RYE1_IXOSC)

HSP 1 Score: 111 bits (277), Expect = 1.750e-24
Identity = 74/248 (29.84%), Postives = 130/248 (52.42%), Query Frame = 0
Query:    4 IAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATCAEFESD-------RPQVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            + V +     G V ++   + +L     +A GV ++   R+ +V ++NFR   + L K   +G          E   ++ A     ++    +   A+ A+ + D       R Q+++LL EY+    +S ++      ++RI  ++DAR   + PY    K  + + +Q+ +M    + +P+   SS W SP+VLV KK+G++ FCVDYR+LN VTK+D YP+PR+D+ LD L  +  F+++D KSG
Sbjct:  194 VPVGITEDFCGEVLLEGSLQLLLGRGIGVARGVAELQDGRT-VVLVTNFRNEAQHLTKGAAVGQ--------VEELQNSAAVAAITDEFSPPQQDSASPAQLDIDPKLPGPKRRQLINLLAEYRDSFATSSKVRQTTVAKHRIVTEDDARPVHRSPYRVSVKERQAIQEQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 429          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A4D5S1N0_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5S1N0_IXOSC)

HSP 1 Score: 111 bits (277), Expect = 2.780e-24
Identity = 79/249 (31.73%), Postives = 130/249 (52.21%), Query Frame = 0
Query:    4 IAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATC-AEFESD-------RPQVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            + V +   S G V ++   + +L     +A GV ++   R+ +  ++NFR   + L K   +G            K+ N A  T+  D  S     +T  A+ + D       R Q+ +LL EY+    +S ++      ++RI  ++DAR   + PY    K  E++  Q+ +M    + +P+   SS W SP+VLV KK+G++ FCVDYR+LN VTK+D YP+PR+D+ LD L  +  F+++D KSG
Sbjct:  194 VLVGIDEASCGEVLLEGSLQLLLGRGIGVARGVAELQDGRT-VALVTNFRNETQHLTKGAAVGHV---------EKLRNPAEITAITDESSPPQQDSTSPAQLDIDPKLPDPKRRQLANLLAEYRDCFATSSKVRQTAVAKHRIVTEDDARPVHRSPYRVSAKEREVIHQQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 429          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A4D5S0C5_IXOSC (RNA-directed DNA polymerase (Fragment) n=4 Tax=Ixodes TaxID=6944 RepID=A0A4D5S0C5_IXOSC)

HSP 1 Score: 110 bits (275), Expect = 5.700e-24
Identity = 75/248 (30.24%), Postives = 132/248 (53.23%), Query Frame = 0
Query:    4 IAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATCAEFESD-------RPQVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            + V  +  +   V ++ + + +L     +A GV ++   R+  V ++NFR   + L K   +G       +   A++  +   +S    +S     A+ A+ + D       R Q+++LL EY+    +S ++      ++RI  ++DAR   + PY    K  E++  Q+ +M    + +P+   SS W SP+VLV KK+G++ FCVDYR+LN VTK+D YP+PR+D+ LD L  +  F+++D KSG
Sbjct:  212 VPVGTNEDTRSEVLLEGNLQLLLGRGIGVARGVAELQDGRT-AVLVTNFRNETQHLTKGAAVG---HVEELQNSAEIAAITDESSPPQQDS-----ASPAQLDIDPKLPDPKRRQLINLLAEYRDCFATSSKMRQTAVAKHRIVTEDDARPVHRSPYRVSAKEREVIQQQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 447          
BLAST of Gchil5499.t1 vs. uniprot
Match: A0A6B0VG70_IXORI (Putative retrotransposable element (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG70_IXORI)

HSP 1 Score: 107 bits (267), Expect = 6.030e-23
Identity = 74/248 (29.84%), Postives = 129/248 (52.02%), Query Frame = 0
Query:    4 IAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTISNFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVATCAEFESD-------RPQVLDLLREYQAM--SSGRLGTIRATQNRIDLQNDARRQFQYPYGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGFCVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG 242
            + V   + + G V ++ + + +L     +A GV ++   R+ +V ++NFR   + L K   +G        + E +        +EE     + T    A+ + D       R Q+ +L+ EY     +S ++      ++RI  ++D     + PY    K  E++  Q+++M    + +P+   SS W SP+VLV KK+G++ FCVDYR+LNAVTK+D YP+PR+D+ LD L  +  F+++D KSG
Sbjct:  212 VPVVTDAATCGEVVLKGNLQLLLGRGIGVARGVAELQHGRT-VVLVTNFRNETQHLTKGAAVGH-------VEELRNSVEIAAIAEESSPPQQDTTPP-AQLDIDAKLPGPKRRQLSNLIAEYSDCFATSSKVRQTTVAKHRIVTEDDVLPVHRSPYRVSVKEREVIQQQVEEMLNDDIIQPS---SSPWASPVVLVRKKDGTLRFCVDYRQLNAVTKKDVYPLPRIDDTLDRLRNSQYFSSMDLKSG 447          
The following BLAST results are available for this feature:
BLAST of Gchil5499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D3E381.980e-3937.97uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1DB02D2.880e-3451.85uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
UPI001E1D9CF03.130e-3033.20uncharacterized protein LOC123544487 n=1 Tax=Merce... [more]
A0A6B0VGV9_IXORI4.240e-2631.45RNA-directed DNA polymerase (Fragment) n=4 Tax=cel... [more]
R7QHJ7_CHOCR4.840e-2551.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A4D5RZ78_IXOSC5.990e-2533.03Putative transposon ty3-g gag-pol polyprotein (Fra... [more]
A0A4D5RYE1_IXOSC1.750e-2429.84Putative transposon ty3-g gag-pol polyprotein (Fra... [more]
A0A4D5S1N0_IXOSC2.780e-2431.73Putative transposon ty3-g gag-pol polyprotein (Fra... [more]
A0A4D5S0C5_IXOSC5.700e-2430.24RNA-directed DNA polymerase (Fragment) n=4 Tax=Ixo... [more]
A0A6B0VG70_IXORI6.030e-2329.84Putative retrotransposable element (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 135..215
e-value: 9.8E-25
score: 89.1
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 179..242
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 179..242
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 216..242
e-value: 9.8E-25
score: 89.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 120..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2141938..2142666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5499.t1Gchil5499.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2141938..2142666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5499.t1 ID=Gchil5499.t1|Name=Gchil5499.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=243bp
MTQIAVSVHSQSSGLVTIQNHPKTVLKHLTLMANGVMDIHPNRSFLVTIS
NFRENPERLPKDTVIGITLPAPVVITEAKMDNLATTTSEEDVESWRGTVA
TCAEFESDRPQVLDLLREYQAMSSGRLGTIRATQNRIDLQNDARRQFQYP
YGTGFKVWEIVADQMDKMRKAQVREPAPPNSSEWPSPLVLVAKKNGSVGF
CVDYRKLNAVTKRDSYPIPRMDECLDSLGKAVEFTTLDAKSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf