Gchil5452.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5452.t1
Unique NameGchil5452.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length306
Homology
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BLAST of Gchil5452.t1 vs. uniprot
Match: A0A2V3J6F1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F1_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 2.530e-31
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0 
Query:  167 ELEVTPTRSPAPFSGTGVSASTIGSSATLSGRMTSSRLVGITVALLTVFGTLSTVTAISFYGRNTNPYRPFITGASLSEESFDFAQDPVPETLNSIHNSRESNIQTRRYEAASLNRDIEPAERLAAAKLLEDIPDRHCR 305
            ++   P++SP PFSG  +S S+ GSS  L+G  T S +  I+V +L + GTL +V AI+ YGR+ NPYRPFITGASLSE+S DF +  +P   N    SR+++  +RRY+A SL RD+   +   AA+LLE+IPDRH R
Sbjct:  115 DITFEPSQSPEPFSGVSISVSSTGSSTILNGLTTPSNITCISVIVLVIIGTLISVMAITLYGRSINPYRPFITGASLSEDSLDFNEVTIPNIANDNVASRDASTVSRRYQALSLERDVGSEQHYEAARLLEEIPDRHRR 253
The following BLAST results are available for this feature:
BLAST of Gchil5452.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6F1_9FLOR2.530e-3148.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 228..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..227
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..203
NoneNo IPR availableTMHMMTMhelixcoord: 205..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1771766..1772683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5452.t1Gchil5452.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1771766..1772683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5452.t1 ID=Gchil5452.t1|Name=Gchil5452.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=306bp
MPVIPQILLLLLMNLGVKCIRVNIGKTGIGPVPPFGETASQMSGSLIEAF
SHNIQHNSSTYSDVPSKISSSPGVDVMDIHPSPYPEDLMASDSPELESIV
FVYPSLPIQEGLMVHNLMETDEQDRISIPSLEAVVPLESDPQPSEAPYVE
FVMSPSVIVLHPPDFPELEVTPTRSPAPFSGTGVSASTIGSSATLSGRMT
SSRLVGITVALLTVFGTLSTVTAISFYGRNTNPYRPFITGASLSEESFDF
AQDPVPETLNSIHNSRESNIQTRRYEAASLNRDIEPAERLAAAKLLEDIP
DRHCR*
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