Gchil5508.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5508.t1
Unique NameGchil5508.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length399
Homology
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BLAST of Gchil5508.t1 vs. uniprot
Match: A0A2V3IEN1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEN1_9FLOR)

HSP 1 Score: 340 bits (872), Expect = 1.010e-110
Identity = 189/381 (49.61%), Postives = 248/381 (65.09%), Query Frame = 0 
Query:   11 DVSVARVDVPFDIYHRLVPRLFTIDGDPLQNDDQNNHMSLCDAPHAPVVCHIQNSVFNRASLAHALYGFSFQTAAHVRCELTRPADAPADAAEAAGGPRR-FAEWSMEAAQLQRNLISCNLVAIANLLNMPSTWTFTLHLHSSPYFGFAGLEARVVLFSPEFNFLSFHLLGISDPHTDVPNLLLLLRTLCPDVHRKLMGVQIHLTHEQHQTMIAASASRVLAAFYRLAPAKPLFFTPDVQQAVPEPPLLPHHLAALSAHQINQLVHQYQPRLQLSWTQSQINQVVRDLSALSRST-HLPPVPQHGTHLSFERSWAFAQRDYRQLRLFVGGLATAFLYKTPQPDRVSITALELTSKNAAQVSVVADVILQARQFMQLRRFVS 389
            D+SVA  DVPF IYHRLVPRLFTI  DPLQ   Q   +     P     C + NS FNR  L HALYGFSFQT   V   L +  +   D       P + F+ W ++AA LQR+++S NL+A++NLLN+P+TWTFTL L SSPY+G AGLEAR+VLFSP+  + SFHLLGIS PH D+PNLLLLL+TLCP +H+KLMGV IHL+  +H  +    ASRVL+ F R +P +P FFTP V   +P P + P  +AAL+      LV++Y+PRL+  WT +QI Q++   S    +  HL   P   + LS  + WA A+R +  L  F+GGL ++F YK     RVSITALE+T ++A+ ++  AD+IL ARQF+ LR F+S
Sbjct:   45 DISVASTDVPFAIYHRLVPRLFTIPNDPLQQ--QPCELFSAQHPAHTHSCTVANSDFNRVVLLHALYGFSFQTTPQVMFTLHQATED--DRVTEQQTPHKIFSRWKLDAAYLQRHILSLNLLAMSNLLNLPTTWTFTLTLQSSPYYGHAGLEARIVLFSPQLEYASFHLLGISRPHIDIPNLLLLLQTLCPQLHQKLMGVNIHLSDAEHNALPGVIASRVLSTFLRRSPRRPRFFTPQVHCQLPGPNVNPLAIAALAPDHFRSLVNEYRPRLESFWTSNQIEQILLQHSQFRNTVQHLLNNPT-ASKLSLAQQWALAERRFASLFYFIGGLGSSFDYKPTPTPRVSITALEITPESASAMTTAADIILHARQFVHLRPFIS 420
The following BLAST results are available for this feature:
BLAST of Gchil5508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEN1_9FLOR1.010e-11049.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2199020..2200216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5508.t1Gchil5508.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2199020..2200216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5508.t1 ID=Gchil5508.t1|Name=Gchil5508.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=399bp
MTVRAQRAPVDVSVARVDVPFDIYHRLVPRLFTIDGDPLQNDDQNNHMSL
CDAPHAPVVCHIQNSVFNRASLAHALYGFSFQTAAHVRCELTRPADAPAD
AAEAAGGPRRFAEWSMEAAQLQRNLISCNLVAIANLLNMPSTWTFTLHLH
SSPYFGFAGLEARVVLFSPEFNFLSFHLLGISDPHTDVPNLLLLLRTLCP
DVHRKLMGVQIHLTHEQHQTMIAASASRVLAAFYRLAPAKPLFFTPDVQQ
AVPEPPLLPHHLAALSAHQINQLVHQYQPRLQLSWTQSQINQVVRDLSAL
SRSTHLPPVPQHGTHLSFERSWAFAQRDYRQLRLFVGGLATAFLYKTPQP
DRVSITALELTSKNAAQVSVVADVILQARQFMQLRRFVSPHSFHQMSH*
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