Gchil6726.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6726.t1
Unique NameGchil6726.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length410
Homology
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A2V3J1W3_9FLOR (Protein LTV1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1W3_9FLOR)

HSP 1 Score: 347 bits (889), Expect = 3.500e-111
Identity = 207/412 (50.24%), Postives = 269/412 (65.29%), Query Frame = 0
Query:    3 EIKRDRKHHPDLDEVIAFLDSDGELDSTASDPLDLGP---DAVEGTFFADSNSDTQSGLLEDDFIALANA-PSEGENQHEADDDALWKNIREPYRKLRDLDEQFEKFMNGFQMDSTDEEYDEIEEELIEQANKQRNDGHPFDFEQFEEKRES-DLIDGMATLNCDGVVNKTEQKYHKLQPQNAASGAERPDEREKEFEQYAAAEFDSGIEHLLGSYARATPNETFEAFDGLDKAREALRKAELEEQEFIAKLNSLDVEGVENDPDLDVHFDEMYKEEEKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIGKAKVAVKF 409
            +I+R+RK++PDLDE+ A LDSDG+L+STASD  ++     D +      D+ S   S LL+DDFIA+AN  P+   NQ +  DD LW N+ + +R+ R LDEQF+KFM+GFQ+DSTDEEY+E  E+L EQA++  ND      EQ +   +  DLI G+A+LNCD      +       P      ++  + RE+EF+QYA AEF+ G+E LLGSY RAT  +T +AFD + K +EA++ AE EE+  + +L  L +E   +D +LD  F+EMYKE EKWDCETI+STYTNLENHPSVIDAPS   R +  R  II+LDPR QAP E         S    DYGTRR++A V  R++GE               SRERRALKSE+KKAFG E+TKQGRHAT +GKAKVAVKF
Sbjct:  171 QIQRERKNNPDLDEIFAQLDSDGDLESTASDAANIDHYLFDELPVGLADDAASVHTSDLLDDDFIAVANTLPA---NQSQPVDDDLWSNVVKEFREPRLLDEQFDKFMSGFQVDSTDEEYEEFREQLREQADRYENDPAYMTSEQADGLLDDEDLIQGLASLNCDDQSQGPQHDSTIPLPTGFPGASQSRNAREQEFQQYATAEFERGMETLLGSYVRATAEQTLDAFDDVQKTKEAIQIAEEEEKARVDQLTDLGIESDGHDSELDSQFEEMYKEREKWDCETIISTYTNLENHPSVIDAPSGRRRRTAPRNAIIQLDPRTQAPAEFVQERNDTVSEHVTDYGTRRAIANVPARSKGEXXXXXXXXXXXXXLASRERRALKSEMKKAFGEERTKQGRHATTLGKAKVAVKF 579          
BLAST of Gchil6726.t1 vs. uniprot
Match: R7QGC9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC9_CHOCR)

HSP 1 Score: 242 bits (617), Expect = 1.110e-70
Identity = 184/425 (43.29%), Postives = 244/425 (57.41%), Query Frame = 0
Query:    3 EIKRDRKHHPDLDEVIAFLDSDGELDSTASDPLDLGPDAVEGTFFADSNSDTQSGLLEDDFIALANAPSEGENQHEADDDALWKNIREPYRKLRDLDEQFEKFMNGFQMDSTDEEYDEIEEELIEQANKQRNDGHPFDFEQFEEKRESD--------LIDGMATLNCDGVVNKTEQKYHKLQPQNAASGAERPD-EREKEFEQYAAAEFDSGIEHLLGSYARATPNETFEAFDGLDKAREALRKAELEEQEFIAKLNS-----LDVEGVENDPDLDVHFDEMYKEE-EKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPA-VDYGT-RRSVAGVSR-RTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIGKAKVAVKF 409
            EIK +RK + DLDEV A LDS+GELDS++    DL  ++ +  FF ++     + LLEDDFI  A    E +       D + K  REP    R LDEQFEKFM   +  S DE+  E EE   + A    N G   D        E +         +D ++ L     V         ++   +     R D +R  E+E    AEF+ G++ +L S++R    E   +  G++KA EAL + + EE   +A+L+      LD E   +D DLD  FD MY+++ EKWDCETI+STY+NL+NHPSVIDAPS   R S  + P+IRLDPR QAP     + R   S  A VD+G+ RR VA  ++ R RGESK++K+ARKAAAKE +RERRALKSE+KKAFG E  KQ RHATAIG +KVA+KF
Sbjct:  172 EIKAERKKNKDLDEVFAALDSEGELDSSSQRDGDLDVESADD-FFNEAGLSGSNDLLEDDFITTAQQICERDEVKTGPLDGIVKEYREP----RLLDEQFEKFMRASEDVSNDED-GESEEFFHDSA--ANNVGDVDDVHAHLTNNELENLFGGEEGFLDELSNLQISETVEGDVGAEDGVEHLESNCSERRADPDRVAEYEDITNAEFERGLDGVLDSFSRVPMEEVLGSRQGVEKAFEALERNDREE---VARLDKRIEEGLDEESDGHDSDLDTKFDVMYEQKGEKWDCETIVSTYSNLDNHPSVIDAPSSTKRRSVVKQPVIRLDPRTQAPEGYMPSVRANASEAAPVDFGSSRREVAQKTQARDRGESKEDKRARKAAAKEAARERRALKSEMKKAFGSESVKQNRHATAIGTSKVAMKF 585          
BLAST of Gchil6726.t1 vs. uniprot
Match: UPI001E1D6E6C (protein LTV1 homolog n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6E6C)

HSP 1 Score: 129 bits (325), Expect = 1.350e-29
Identity = 150/470 (31.91%), Postives = 205/470 (43.62%), Query Frame = 0
Query:    3 EIKRDRKHHPDLDEVIAFLDSDGELDSTASDPLDLGPDAVEGTFFADSN-----SDTQSGL-LEDDFIALANAPSEGENQHEADDDALWKNIREPYRKL-------RDLDEQFEKFMNGFQMDSTDEEYDEIEEELIEQANKQRNDGHPFDFEQFEEKRESDLIDGMATLNCDGVVNKTEQKYHKLQPQNAASGAERPDEREKEFEQYAAAEFDSGIEHLLGSYARATPNETFEAFDGLDKAREAL-----------RKAEL------------------------EEQEFIAKLNSLDVE----GVENDPDLDVHFDEMYKEEEKWDCETILSTYTNLENHPSVIDAPSRYPRSST----QRAPIIRLDPRIQAPLE-----LSHAERPVTSAPAVDYGT--RRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIGKAKVAVKF 409
            EI+  R+   DLDEV+A L+ D   D  + +      +  E  F +D       S+T  GL L DDF+  AN P         +D  + + I+ P  K        R LD QF+  M  +Q D              E  N+  +D +  D     E ++ D  D               + + +L    AA   +     + + E          +  L+  Y R T  E +   DGL +A EA+           R+AE+                        EE       +SLD E    G  +    D+  D+  +  + WDCETILSTY+NL+NHPSVID      R        R PIIRLDPR  AP++     L  A     +  A+DYGT  +++ A V  R R E+ +EK+ARK AAK  +RERRA KSELKKAF  E  KQ  HAT IGK+KVAV+F
Sbjct:   50 EIQAQRQVDRDLDEVLAALE-DSSADEHSEEENVAVSEEPESDFASDIEEHEAVSETDDGLGLHDDFVRRANGP---------EDVLIPRAIKNPSSKADTKDRPERLLDVQFDLLMREYQED--------------ENGNEDGDDCYGADESPQTEPKDIDCTDSETDSEELSFCGGAGEMHSELLESLAADVPQDMSRLDNDIE--------VAMNALITQYKRTTVEEAYCGPDGL-RAPEAIAGVRRAAAMHCREAEVSRGNVMPDISREPVTGPTSEICSTEEMSNGLHASSLDEEEDTGGFGDSNQWDIVIDD--RPAKNWDCETILSTYSNLDNHPSVIDDGPGGVRPRVVRPRHRDPIIRLDPRTSAPVDHLPESLLKAGAQRGNMAAIDYGTLSKQNSAHVPARNRTETAEEKRARKGAAKMAARERRAEKSELKKAFAAENVKQENHATLIGKSKVAVRF 484          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A5J4YQN6_PORPP (Protein LTV1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQN6_PORPP)

HSP 1 Score: 81.6 bits (200), Expect = 4.390e-13
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 0
Query:  273 EEEKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVS-RRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIGKAKVAVKF 409
            E E+WDCETIL+TYTNLENHPS+I  P +   +  ++ P+       +   E    E+        D   + SV  VS  R +GE+ +E++ RK A KE  RERRA KS  +  F  E  +Q  H + +G +KV V+F
Sbjct:  392 EAERWDCETILTTYTNLENHPSMIGIPRK---ARKKKVPVTAAAETAEPEAETESREQ------EPDDRRKESVPPVSAERHKGETAEERRLRKQAVKEQKRERRATKSHNRAVFRAENVRQATHESKMGTSKVVVQF 520          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A1X6P407_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P407_PORUM)

HSP 1 Score: 75.1 bits (183), Expect = 2.410e-11
Identity = 63/165 (38.18%), Postives = 74/165 (44.85%), Query Frame = 0
Query:  276 KWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVS-------------------------------RRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIGKAKVAVKF 409
            KWDCET+L+TYTN EN PSVI  P R P +       I LD R  AP +   A     SA AV    R  +                                    R RGE    K+ARKAA K   R R   K+ +K AF VE  +Q RHATA+G A+VAV F
Sbjct:  169 KWDCETVLTTYTNTENLPSVIGLPPRRPAT-------IALDRRFGAPADYLPA-----SASAVPPALRPVLVPADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRGEXAAAKRARKAAVKAARRARXXEKAAVKDAFAVEGGRQSRHATAVGTARVAVHF 321          
BLAST of Gchil6726.t1 vs. uniprot
Match: UPI0004409425 (Low temperature viability protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004409425)

HSP 1 Score: 75.1 bits (183), Expect = 6.150e-11
Identity = 53/137 (38.69%), Postives = 78/137 (56.93%), Query Frame = 0
Query:  258 ENDPDLDVHFDEMYKEE-EKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQ 393
            E++ + D  + E+ +E+ E+WDCETILSTY+NLENHP +I         +T++ P I LDP+I  P   S  ++  + A   D    R+      R + ESK+EK+ARK A KE  + RRA K   ++ F  E+  Q
Sbjct:  403 EDEDESDEAYRELVEEKGERWDCETILSTYSNLENHPKLIRV------RNTEKVPKIHLDPKIGVPSLKSDEDKKSSQA---DIEASRTTHTTIARKKDESKEEKRARKQAVKEERQTRRAEKKITQEQFANERRNQ 530          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A8H6SXZ5_9AGAR (Uncharacterized protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6SXZ5_9AGAR)

HSP 1 Score: 74.3 bits (181), Expect = 1.060e-10
Identity = 70/194 (36.08%), Postives = 95/194 (48.97%), Query Frame = 0
Query:  201 EFDSGIEHLLGSYA----RATPNETFEAFDGLDKAREALRKAELEEQEFIAKLNSLD-VEGVENDPDLDVHFDEMYKEEEKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVE 389
            +F+S ++  L  Y     +  P    E  DG  K  E LR+A  +++    +   +D VE +    D+D   D       +WDCETIL+TY+NLENHP +I A     R  TQ  P I LD R   P+ +S+AE    S  + D   RR + G  +R R ESK+ KKARK A KE            K+ FG E
Sbjct:  335 DFESMMDEFLNDYEILGRKMKPK--LEGDDGAAKL-ETLRRAMGQDERVRIESGEVDEVEDILMPLDIDDRKD-------RWDCETILTTYSNLENHPRLIRARDGETRK-TQVVPKIHLDSRTGMPIVISNAE----SESSDDENERRHI-GTLKRDRNESKEAKKARKQAVKEXXXXXXXXXXXTKEMFGAE 512          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A2H3EBZ9_ARMGA (LTV-domain-containing protein n=3 Tax=Armillaria TaxID=47424 RepID=A0A2H3EBZ9_ARMGA)

HSP 1 Score: 72.0 bits (175), Expect = 6.060e-10
Identity = 73/209 (34.93%), Postives = 103/209 (49.28%), Query Frame = 0
Query:  198 AAAEFDSGIEHLLGSYA----RATPNETFEAFDGLDKAREALRKAELEEQEFIAKLNSLDVEGVENDPDLDVHFDEMYKEEEKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTS-APAVDYGTRRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAIG 401
            A  +F S ++  L  Y     +  P    E   G +K  E LR+A  ++Q  + +  S D +  E D  L++  D+    +++WDCETIL+TYTNLENHP +I A        T+R P I LDP+   P  +   +  + + +P  D       A V+R  R ES + KKARKAA K     RRA K   K+ FG E   Q +  T  G
Sbjct:  343 ARDDFSSMMDEFLNDYEILGRKMKPK--LEGDSGAEKL-ETLRRAMGQDQR-VKESYSNDDDTPEEDLFLELEEDK----KDRWDCETILTTYTNLENHPRLIRA------RDTRRTPKITLDPKTGLPSIVEPRQAKLRAQSPEPDLKRTPRQATVTR-PRNESPESKKARKAAVKVNRAARRAEKKATKEEFGSEFKVQVKTVTTAG 536          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A0B7FC81_THACB (Protein LTV1 n=3 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0B7FC81_THACB)

HSP 1 Score: 72.0 bits (175), Expect = 6.340e-10
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 0
Query:  273 EEEKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAP----------LELSH-AERPVTSAPAVDYGTRRSVAGVSRRT----RGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGR 395
            E+++WDCETILSTY+NLENHP +I A  R P       P I+LDP+   P          +  +H A RP T+A     G  ++ A ++ +T    R ESK++KKARK AA+   + RR  KS +K+AF  E+  Q R
Sbjct:  431 EQDRWDCETILSTYSNLENHPRLILARDRRP------VPRIQLDPKTGLPSIAGDRDQYDVPSTHRAVRPNTTAREEVLG--QTAAELAPKTISRPRNESKEDKKARKEAARIQKQTRRVEKSAMKEAFATERKVQQR 560          
BLAST of Gchil6726.t1 vs. uniprot
Match: A0A061QKM3_9CHLO (Protein LTV1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QKM3_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 7.350e-10
Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  275 EKWDCETILSTYTNLENHPSVIDAPSRYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVSRRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTK 392
            EKWDCE+ILS  +NL+NHP  I  P R  R        I L  +   P+          S+     G   S+A  S R + ES++EKKARKAA KE  R  RA K +LK+ F  +++K
Sbjct:   49 EKWDCESILSLRSNLDNHPRCISEPRRGGRPFPAGREKIELSAKTGLPINRQSGGATAMSSDG-SSGDAVSIATSSVRRKDESREEKKARKAAVKEAQRXXRARKKDLKQMFKDQESK 165          
The following BLAST results are available for this feature:
BLAST of Gchil6726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1W3_9FLOR3.500e-11150.24Protein LTV1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QGC9_CHOCR1.110e-7043.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D6E6C1.350e-2931.91protein LTV1 homolog n=1 Tax=Mercenaria mercenaria... [more]
A0A5J4YQN6_PORPP4.390e-1339.13Protein LTV1-like n=1 Tax=Porphyridium purpureum T... [more]
A0A1X6P407_PORUM2.410e-1138.18Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
UPI00044094256.150e-1138.69Low temperature viability protein n=1 Tax=Fomitipo... [more]
A0A8H6SXZ5_9AGAR1.060e-1036.08Uncharacterized protein n=1 Tax=Mycena indigotica ... [more]
A0A2H3EBZ9_ARMGA6.060e-1034.93LTV-domain-containing protein n=3 Tax=Armillaria T... [more]
A0A0B7FC81_THACB6.340e-1041.30Protein LTV1 n=3 Tax=Rhizoctonia solani TaxID=4569... [more]
A0A061QKM3_9CHLO7.350e-1039.83Protein LTV1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availableCOILSCoilCoilcoord: 228..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..147
NoneNo IPR availablePANTHERPTHR21531:SF0PROTEIN LTV1 HOMOLOGcoord: 94..399
IPR007307Low temperature viability protein Ltv1PANTHERPTHR21531LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATEDcoord: 94..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:607305..608534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6726.t1Gchil6726.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 607305..608534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6726.t1 ID=Gchil6726.t1|Name=Gchil6726.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=410bp
MEEIKRDRKHHPDLDEVIAFLDSDGELDSTASDPLDLGPDAVEGTFFADS
NSDTQSGLLEDDFIALANAPSEGENQHEADDDALWKNIREPYRKLRDLDE
QFEKFMNGFQMDSTDEEYDEIEEELIEQANKQRNDGHPFDFEQFEEKRES
DLIDGMATLNCDGVVNKTEQKYHKLQPQNAASGAERPDEREKEFEQYAAA
EFDSGIEHLLGSYARATPNETFEAFDGLDKAREALRKAELEEQEFIAKLN
SLDVEGVENDPDLDVHFDEMYKEEEKWDCETILSTYTNLENHPSVIDAPS
RYPRSSTQRAPIIRLDPRIQAPLELSHAERPVTSAPAVDYGTRRSVAGVS
RRTRGESKDEKKARKAAAKEISRERRALKSELKKAFGVEQTKQGRHATAI
GKAKVAVKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007307Ltv1