Gchil5694.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5694.t1
Unique NameGchil5694.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length150
Homology
BLAST of Gchil5694.t1 vs. uniprot
Match: R7QLN2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLN2_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 1.800e-24
Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    2 LSVLNSLGHSVSYASTEAYRLKLISDREKTPRGAWKNVPLSETSFLLTCQFDNWDLMPLHAVKANGKSMPKVNGALLQSVCRA-KKNDETLSIVAGD----NEWKPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLL 144
            +SVLN++G  +SY STE YR KLI++RE+   G W++    E   +   QFDNWD+ PLHAVK +GKSMPKVNG+LLQ V    K+  E ++  +      + WK V  LG R+ F    +S E   ++ Q +D+ FGL    R +L+
Sbjct:  277 ISVLNAMGVFLSYTSTERYRQKLIAERERC--GPWQHTKFDEV-IMPVLQFDNWDIKPLHAVKVDGKSMPKVNGSLLQGVVPGQKRRRENIAEHSTKRPRLDSWKSVRGLGCRDAFINRFSSVENTMLVKQFSDIAFGLTALFRGQLV 421          
BLAST of Gchil5694.t1 vs. uniprot
Match: A0A2V3ISC4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISC4_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 2.190e-23
Identity = 61/153 (39.87%), Postives = 88/153 (57.52%), Query Frame = 0
Query:    2 LSVLNSLGHSVSYASTEAYRLKLISDREKTPRGAWKNVPLSETSFLLTCQFDNWDLMPLHAVKANGKSMPKVNGALLQS----VCRAKKN------DETLSIVAGDNEWKPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLL 144
            +SVLN++G  +SY  TE +R KLI++RE+T  G W    + E S +   QFDNWD+ P+HAVK +GK+MPKVNG+LLQ      C+  +       D     +A  + WK V  LG R  F     + E   +++Q  +V+FGLV   R +L+
Sbjct:  456 VSVLNAMGLFLSYQVTERFREKLIAERERT--GPWDFNKIDEAS-IPVLQFDNWDIKPVHAVKTDGKAMPKVNGSLLQGHLPGTCKGDRQAVSDNFDTRPKKIARIDSWKSVACLGTREQFVKRFTTPENAAIINQFNNVVFGLVALFRGQLV 605          
BLAST of Gchil5694.t1 vs. uniprot
Match: R7QH71_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH71_CHOCR)

HSP 1 Score: 98.2 bits (243), Expect = 1.720e-21
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0
Query:    8 LGHSVSYASTEAYRLKLISDREKTPRGAWKNVPLSETSFLLTCQFDNWDLMPLHAVKANGKSMPKVNGALLQSVCRA-KKNDETLSIVAGD----NEWKPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLL 144
            +G  +SY STE YR KLI++RE+   G W++    E   +   QFDNWD+ PLHAVK +G SMPKVNG+LLQ V    K+  E ++  +      + WK V  LG R+ F    +S E   ++ Q +D+ FGL    R +L+
Sbjct:    1 MGVFLSYTSTERYRQKLIAERERC--GPWQHTKFDEV-IMPVLQFDNWDIKPLHAVKVDGNSMPKVNGSLLQRVVPGQKRRRENIAEHSTKRPRLDSWKSVRGLGCRDAFINRFSSVENTMLVKQFSDIAFGLTALFRGQLV 139          
BLAST of Gchil5694.t1 vs. uniprot
Match: A0A2V3IJH2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJH2_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 5.640e-19
Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 0
Query:    3 SVLNSLGHSVSYASTEAYRLKLISDREKTPRGAWKNVPLSETSFLLTCQFDNWDLMPLHAVKANGKSMPKVNGALLQSV--CRAKK--NDETLSIVAGDN-------EW-KPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLL 144
            SVL++LG   SY   E +R +LIS RE+  RGA+ +V L +   ++T Q DN D++P+H VKA G+S+P + G   Q +  CR +K  ND T +    +N       +W +P  +  DR + +A+  S E R++L +  D++FG+V+ +R +LL
Sbjct:  381 SVLHALGLVTSYDRAETFRRRLISKREQAERGAFDSVRLEDR--IVTVQLDNVDMLPVHNVKAFGESLPILIGTATQGIIQCRKRKRVNDSTETSTMTENRKDVNPNKWLRPKDIFKDRVSSAASFNSKEDRDILVEFCDLVFGIVLENRSRLL 532          
BLAST of Gchil5694.t1 vs. uniprot
Match: A0A2V3J1Y0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Y0_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 4.880e-13
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   23 KLISDREKTPRGAWKNVPLSETSFLLTCQFDNWDLMPLHAVKANGKSMPKVNGALLQSVCRAKKND--ETLSIVAGDNE-----WKPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLL 144
            +LI++RE+     W    +++ + +    F+NWD+ PLHAVK +GK++PKVNG+LLQ   R  K    E  ++ +   +     WK +  LG R +F   L + E   VL Q  +V+FG+V   R +L+
Sbjct:  217 RLIAERERDR--PWDFNVVNDVA-IPVLHFENWDIKPLHAVKVDGKALPKVNGSLLQGQLRGSKRSLSEKGTVPSKRQKLLGVAWKDIACLGSREDFIDELTNTESSNVLRQFNNVVFGMVSWFRGQLV 342          
The following BLAST results are available for this feature:
BLAST of Gchil5694.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
R7QLN2_CHOCR1.800e-2442.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISC4_9FLOR2.190e-2339.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QH71_CHOCR1.720e-2140.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IJH2_9FLOR5.640e-1937.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Y0_9FLOR4.880e-1334.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:777294..777743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5694.t1Gchil5694.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 777294..777743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5694.t1 ID=Gchil5694.t1|Name=Gchil5694.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=150bp
MLSVLNSLGHSVSYASTEAYRLKLISDREKTPRGAWKNVPLSETSFLLTC
QFDNWDLMPLHAVKANGKSMPKVNGALLQSVCRAKKNDETLSIVAGDNEW
KPVPVLGDRNNFSANLASAERREVLHQIADVMFGLVITHREKLLDCAQG*
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