Gchil6731.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6731.t1
Unique NameGchil6731.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length173
Homology
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BLAST of Gchil6731.t1 vs. uniprot
Match: A0A2V3IWQ8_9FLOR (Phospholipid phosphatase 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ8_9FLOR)

HSP 1 Score: 157 bits (396), Expect = 2.490e-44
Identity = 92/159 (57.86%), Postives = 108/159 (67.92%), Query Frame = 0 
Query:   12 IDAPLLPTEFVEQPRTASPPGTIMLSPFQAPFQWDKNASHSLFRSYNARYPDYPLHWLELGAHALSWLLISLFLFLFIPITLLIIAALLVNLLGVIIIDLLLIVVFKSLFRRHLPHYNRYFAPLLLPAVIHFCFSSGHATRTGLVAAFFPLAAAHKQLP 170
            ID+PLLPT+  E+    S   T M SPFQ    WDK+AS+ ++RSYNA  P +PLH LE+ AH + WL++ L + LF P      +ALLVNLL V IIDL LI +FK LFRR  PHYNR  APL L AV  F F SGHATR GLVAAF P+AAAH QLP
Sbjct:   12 IDSPLLPTQVAERSDLRSATPTTMRSPFQLLVDWDKDASYFIYRSYNAHLPTFPLHLLEIAAHGVPWLIVPLLVLLFYPSLSPTNSALLVNLLAVTIIDLGLIALFKPLFRRSRPHYNRSIAPLSLHAVDQFSFPSGHATRAGLVAAFVPVAAAHYQLP 170
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BLAST of Gchil6731.t1 vs. uniprot
Match: R7QBQ8_CHOCR (acidPPc domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBQ8_CHOCR)

HSP 1 Score: 58.2 bits (139), Expect = 2.990e-7
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:   65 PLHWLELGAHALSWLLISLFLFLFIPITLLIIAALLVNLLGVIIIDLLLIVVFKSLFRRHLPHYNRYFAPLLLPAVIHFCFSSGHATRTGLVAAF 159
            PL  LE+  H + WL I + LFL         AAL++N L + ++DLL+I++ K LFRR  P YN     + L AV  F F SGH+TR G +++F
Sbjct:    8 PLLALEVSGHGVPWLAIPILLFLCKTHLSATSAALMLNFLALTVLDLLVILILKPLFRRSRPVYNTGIGHVTLHAVDQFSFPSGHSTRGGFLSSF 102
The following BLAST results are available for this feature:
BLAST of Gchil6731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IWQ8_9FLOR2.490e-4457.86Phospholipid phosphatase 6 n=1 Tax=Gracilariopsis ... [more]
R7QBQ8_CHOCR2.990e-742.11acidPPc domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..121
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 128..150
IPR036938Phosphatidic acid phosphatase type 2/haloperoxidase superfamilySUPERFAMILY48317Acid phosphatase/Vanadium-dependent haloperoxidasecoord: 34..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:683805..684323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6731.t1Gchil6731.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 683805..684323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6731.t1 ID=Gchil6731.t1|Name=Gchil6731.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=173bp
MRRACRIWPTIIDAPLLPTEFVEQPRTASPPGTIMLSPFQAPFQWDKNAS
HSLFRSYNARYPDYPLHWLELGAHALSWLLISLFLFLFIPITLLIIAALL
VNLLGVIIIDLLLIVVFKSLFRRHLPHYNRYFAPLLLPAVIHFCFSSGHA
TRTGLVAAFFPLAAAHKQLPPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036938P_Acid_Pase_2/haloperoxi_sf