Gchil6807.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6807.t1
Unique NameGchil6807.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length308
Homology
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BLAST of Gchil6807.t1 vs. uniprot
Match: A0A2V3J6G2_9FLOR (Protein ILITYHIA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6G2_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 1.090e-66
Identity = 139/344 (40.41%), Postives = 201/344 (58.43%), Query Frame = 0 
Query:    1 MKTVTLAKDVVRSCSSALRRADEVAVLDKVFPTVDHALKRQTNGALPAVNFMLRGLRTKDVCIGACKILFPTLQQASKSSDEAMRAYAFHLAEELGHCVNSENVLLKIAVHQTGFLKTARYGYQKNSTLRSIAVLECASRRSKKIYEEVLQDIFSILSSKKEKSTDVRLAGFLIIVQILSEVQSGTEVPEIVQ----ILFDG---------------------------------NPREILEEIAAGGATKSKQEDSIRALGILSVWSSANVGEVPLSLGTAADSVLSDPKITPGLQNPNKFSSITETNCARACCSWIVQTKQTALNAALGSIYMPCLDKRSQV 307
            MK   +A+D+VR  SS L +AD+  V++ V P VDHALKR+T  ALPA   + R ++T D+  G  K + PTLQQA K+SDE MR+    +++ LG C+ +E +LL     Q   LKTARYGYQK +T+ +IA + CAS RS+ +Y +VL+ I+S LS+KKE+S DVR AGF  +V IL EV       +IVQ    +L DG                                   R+ILE+IAA  +TKSKQ++++R+L +L+ W  +    +  +L + A++VL D K +P LQ+P+  +S++ET CA  CC W+V+T     +  + +IY   LD R QV
Sbjct:  213 MKAAKIAQDLVRVSSSVLSQADQDLVIENVLPIVDHALKRETKLALPAAVSLFRAIQTFDISKGVSKTILPTLQQAVKNSDEEMRSNGVRMSQALGFCIKNEELLLSTTETQISALKTARYGYQKTATVEAIAAMVCASTRSETVYVKVLEGIYSWLSAKKERSADVRCAGFQALVSILLEVPKDLGSLDIVQKCVGLLTDGLCGKQMEDDRKAVLVAMSADIPRRCISESLMTSKSRDILEKIAAECSTKSKQDEALRSLAVLATWDLSR-DVISCNLRSQANAVLGDRKSSPVLQDPSVLTSLSETRCAITCCEWMVETGHKFADLGIEAIYKHSLDPRPQV 555
The following BLAST results are available for this feature:
BLAST of Gchil6807.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6G2_9FLOR1.090e-6640.41Protein ILITYHIA n=1 Tax=Gracilariopsis chorda Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 66..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1268714..1269741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6807.t1Gchil6807.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1268714..1269741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6807.t1 ID=Gchil6807.t1|Name=Gchil6807.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=308bp
MKTVTLAKDVVRSCSSALRRADEVAVLDKVFPTVDHALKRQTNGALPAVN
FMLRGLRTKDVCIGACKILFPTLQQASKSSDEAMRAYAFHLAEELGHCVN
SENVLLKIAVHQTGFLKTARYGYQKNSTLRSIAVLECASRRSKKIYEEVL
QDIFSILSSKKEKSTDVRLAGFLIIVQILSEVQSGTEVPEIVQILFDGNP
REILEEIAAGGATKSKQEDSIRALGILSVWSSANVGEVPLSLGTAADSVL
SDPKITPGLQNPNKFSSITETNCARACCSWIVQTKQTALNAALGSIYMPC
LDKRSQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold