Gchil6677.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6677.t1
Unique NameGchil6677.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length474
Homology
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A2V3IIQ0_9FLOR (Nucleolar and coiled-body phosphoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ0_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 4.250e-41
Identity = 113/234 (48.29%), Postives = 147/234 (62.82%), Query Frame = 0
Query:  273 YEKRASRRQSGVIQDLSRKLENVSPAAPANSKQKIGDSLKSSKRESTAVVEKKHKTSD-----EETKASLL--------ASSGMKEKKCEVKLGISKVDTPMN----SVNG-----------AENN-----WGSNSGSQQRKRXXSGGDGNGERENRAPFKRVRVEEVNFKDDRLRDNSFYSKRDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSDDSD 473
            YEKR++RR+SGV+QDLSRKL+++SP  P N+ Q        +K   T+VVE++ K        E++ +S+L        + SG+K    + K    +  TP+     S NG           A NN      G++  +Q+RKR       +  REN  PFKRV+VE+V FKDDRL+DN+F+SKRDT+GS AHRDL VTKGKGFRKEKTKKKRLNHHGG+LS EVNS+KF DDSD
Sbjct:  448 YEKRSTRRKSGVVQDLSRKLQSLSPRIP-NTPQ--------NKETRTSVVERQVKEGGLCRQTEKSSSSVLPTGTDPWMSGSGLKPSHSKTKKTEERTKTPVALRELSANGDAVIQHIGNGAAHNNRFDKATGNDGSNQKRKRTRKDETSSAIRENPKPFKRVKVEDVVFKDDRLKDNTFFSKRDTFGSRAHRDLVVTKGKGFRKEKTKKKRLNHHGGRLSLEVNSFKFPDDSD 672          
BLAST of Gchil6677.t1 vs. uniprot
Match: R7QJ02_CHOCR (SRP40_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ02_CHOCR)

HSP 1 Score: 113 bits (282), Expect = 3.030e-23
Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 0
Query:  277 ASRRQSGVIQDLSRKLENVSPAAPANSKQKIGDSLKSSKRESTAVVEKKHKTSDEETKASLLASSGMKEKKCEVKLGISKVDTPMNSVNGAENNWGSNSGSQQRKRXXSGGDGNGERENRAPFKRVRVEEVNFKDDRLRDNSFYSKRDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFE 462
            A+RR+SGV+Q+L+ KL+NV+P+ P N+       L  SKRE     ++   +SD+  K   +   G +    EV+   S+     +S +  + +   N+  ++R    +G      R   +PFKRVR E V + D RLRDN+FYSK D++G  AH DL VT+GKGFRKEKTKKKRLNHHGG LS++
Sbjct:  325 AARRRSGVVQNLAAKLQNVTPS-PKNA-------LNKSKREKRKSQDRSDVSSDDVVKEDKIG--GKENTSTEVQFPRSEQKRKASSAS-LDGDAFINNKRRRRNENFNG------RFTPSPFKRVREETVVYSDSRLRDNTFYSKNDSFGVRAHNDLIVTRGKGFRKEKTKKKRLNHHGGTLSYQ 493          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A507BUM6_9FUNG (SRP40_C domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BUM6_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 1.190e-15
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:  397 APFKRVRVEEVNFKDDRLRDNSFYSKRDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNS---YKFSDDSD 473
             PF+RV+++EV + D+ L+DNSF+SK D YG  AH+DL VT+GKGFR EKTKKKR ++ GG +   V+S   +K+SDD +
Sbjct:  177 TPFQRVKIDEVTYFDESLKDNSFHSKTDEYGMRAHQDLIVTRGKGFRAEKTKKKRGSYRGGPIDTSVSSSFKFKYSDDEE 256          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A4Q9N8L4_9APHY (SRP40, C-terminal domain-containing protein n=1 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9N8L4_9APHY)

HSP 1 Score: 80.1 bits (196), Expect = 9.030e-15
Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 0
Query:  387 GDGNGE--RENRAPFKRVRVEEVNFKDDRLRDNSFYSK---RDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            GDGNG+  R++  PF+R++V++V F D+RL+DN F ++      YG+ A RDL VT+G GFRKEK KKKR ++ GG+++ +  S KF+D
Sbjct:   13 GDGNGKKSRKSNTPFQRIKVDQVKFADERLKDNRFEARGAAESDYGARASRDLMVTRGAGFRKEKNKKKRGSYKGGEITMQSYSIKFTD 101          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A5C3PY64_9APHY (SRP40_C domain-containing protein (Fragment) n=1 Tax=Polyporus arcularius HHB13444 TaxID=1314778 RepID=A0A5C3PY64_9APHY)

HSP 1 Score: 79.3 bits (194), Expect = 1.560e-14
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0
Query:  378 QQRKRXXSGGDGNGERENRAPFKRVRVEEVNFKDDRLRDNSFYSK---RDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            Q   R  + G+G   ++  APF+RV+ EEV + D RL+DN F S+      YG+ A RDL VT+G GFRKEK KKKR ++ GG+++ E +S KF+D
Sbjct:    3 QPNARGKNNGEGKKPKKVNAPFQRVKAEEVTYIDPRLKDNRFESRGASASDYGARASRDLIVTRGAGFRKEKNKKKRGSYRGGEITMESHSIKFTD 98          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A1Y2C984_9BASI (SRP40, C-terminal domain-domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2C984_9BASI)

HSP 1 Score: 80.9 bits (198), Expect = 4.770e-14
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  385 SGGDGNGERENRAPFKRVRVEEVNFKDDRLRDNSFYSK---RDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFS 469
            +GG G G R   APF+RV+ EEV F DDRLRD SF ++      YG+ A  DL VT+GKGF KEK KKKR ++ GG ++ E +S KF+
Sbjct:  106 NGGKGKGNRVANAPFRRVKAEEVTFHDDRLRDMSFAARPAGMSDYGARASADLIVTRGKGFVKEKNKKKRGSYRGGDITMESHSIKFN 193          
BLAST of Gchil6677.t1 vs. uniprot
Match: S7QEU1_GLOTA (SRP40_C domain-containing protein (Fragment) n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7QEU1_GLOTA)

HSP 1 Score: 77.0 bits (188), Expect = 5.180e-14
Identity = 39/73 (53.42%), Postives = 55/73 (75.34%), Query Frame = 0
Query:  401 RVRVEEVNFKDDRLRDNSFYSK---RDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            R++ E+V F D+RL+DNS+ SK   ++ YG  AHRDL VT+G GFRKEK KKKR ++ GG+++ E +S KF+D
Sbjct:    1 RIKPEKVKFADERLKDNSYQSKGGPQNDYGDKAHRDLIVTRGAGFRKEKNKKKRGSYRGGEITMESHSIKFTD 73          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A371DVA2_9APHY (SRP40_C domain-containing protein n=1 Tax=Polyporus brumalis TaxID=139420 RepID=A0A371DVA2_9APHY)

HSP 1 Score: 80.9 bits (198), Expect = 8.290e-14
Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 0
Query:  363 SVNGAENNWGS-NSGSQQRKRXXSGGDGNGERENRAPFKRVRVEEVNFKDDRLRDNSFYSK---RDTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            +VNG   N  S N+  Q   R  + G+G   ++  APF+RV+ EEV + D RL+DN F S+      YG+ A RDL VT+G GFRKEK KKKR ++ GG+++ E +S KF+D
Sbjct:  109 AVNGTPANGSSENTTPQPSGRGKNNGEGKKPKKANAPFQRVKAEEVTYIDPRLKDNRFESRGASASDYGARASRDLIVTRGAGFRKEKNKKKRGSYRGGEITMESHSIKFTD 220          
BLAST of Gchil6677.t1 vs. uniprot
Match: W4KLB3_HETIT (LisH domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KLB3_HETIT)

HSP 1 Score: 83.2 bits (204), Expect = 1.410e-13
Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 0
Query:  385 SGGDGNGE--RENRAPFKRVRVEEVNFKDDRLRDNSFYSKR---DTYGSMAHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            +G +GNG+  R+   PF+RV+V++V F D+RL+DN+F S+    D YG+ A RDL VT+G GFRKEK KKKR ++ GG+++   +S+KF D
Sbjct:  321 NGKNGNGKPPRKTNTPFQRVKVDQVQFTDERLKDNTFESRNASMDDYGAKASRDLIVTRGDGFRKEKNKKKRGSYKGGEITMGTHSFKFDD 411          
BLAST of Gchil6677.t1 vs. uniprot
Match: A0A137NPQ1_CONC2 (SRP40_C domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NPQ1_CONC2)

HSP 1 Score: 79.7 bits (195), Expect = 3.050e-13
Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 0
Query:  393 RENRAPFKRVRVEEVNFKDDRLRDNSFYSKRDTYGSM---AHRDLAVTKGKGFRKEKTKKKRLNHHGGKLSFEVNSYKFSD 470
            R+ +  F R+R E+V F D RL+DN+F SK   YGS    AH DL VTKGKGF KEK KKKR ++ GG++ F+ +S KF D
Sbjct:  161 RQQKERFCRIREEDVTFHDSRLKDNTFLSKGGAYGSYGMKAHEDLIVTKGKGFTKEKNKKKRGSYRGGQIDFQSHSIKFDD 241          
The following BLAST results are available for this feature:
BLAST of Gchil6677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIQ0_9FLOR4.250e-4148.29Nucleolar and coiled-body phosphoprotein 1 n=1 Tax... [more]
R7QJ02_CHOCR3.030e-2342.47SRP40_C domain-containing protein n=1 Tax=Chondrus... [more]
A0A507BUM6_9FUNG1.190e-1553.75SRP40_C domain-containing protein n=1 Tax=Synchytr... [more]
A0A4Q9N8L4_9APHY9.030e-1548.31SRP40, C-terminal domain-containing protein n=1 Ta... [more]
A0A5C3PY64_9APHY1.560e-1446.88SRP40_C domain-containing protein (Fragment) n=1 T... [more]
A0A1Y2C984_9BASI4.770e-1452.27SRP40, C-terminal domain-domain-containing protein... [more]
S7QEU1_GLOTA5.180e-1453.42SRP40_C domain-containing protein (Fragment) n=1 T... [more]
A0A371DVA2_9APHY8.290e-1445.54SRP40_C domain-containing protein n=1 Tax=Polyporu... [more]
W4KLB3_HETIT1.410e-1349.45LisH domain-containing protein n=1 Tax=Heterobasid... [more]
A0A137NPQ1_CONC23.050e-1353.09SRP40_C domain-containing protein n=1 Tax=Conidiob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007718Srp40, C-terminalPFAMPF05022SRP40_Ccoord: 398..468
e-value: 3.4E-21
score: 75.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..224
NoneNo IPR availablePANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 90..470
NoneNo IPR availablePANTHERPTHR23216:SF1NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 90..470

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:155355..157591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6677.t1Gchil6677.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 155355..157591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6677.t1 ID=Gchil6677.t1|Name=Gchil6677.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=474bp
MVGQAAKRDRTSPEWDSSSLCSLIHNGFRKAGFIHSAAAFADDCKNDWRK
GEKILQEAYKAFRSSSDSLPKPLDITQLKGESEKKLIDEEIPKLNNNVSE
SSSSDSESSSQGQETKASNQASSSSSEAEKPAERVPKKIKEANSSRPGRT
AVHNGKVGELNSSKDTKSSSSSSSSSSYSSSSSEGSSDPTSKVNSKGAES
SGEDENESDTSSSSSISSDELSADAQKPESLETKQKNSIDSSSPLATSGD
DSSSVGSSSENNDSSESNSSESYEKRASRRQSGVIQDLSRKLENVSPAAP
ANSKQKIGDSLKSSKRESTAVVEKKHKTSDEETKASLLASSGMKEKKCEV
KLGISKVDTPMNSVNGAENNWGSNSGSQQRKRRRSGGDGNGERENRAPFK
RVRVEEVNFKDDRLRDNSFYSKRDTYGSMAHRDLAVTKGKGFRKEKTKKK
RLNHHGGKLSFEVNSYKFSDDSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007718Srp40_C