Gchil6702.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6702.t1
Unique NameGchil6702.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length500
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:413465..414964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6702Gchil6702Gracilaria chilensis NLEC103_M9 malegenetig00004416_pilon 413465..414964 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6702.t1.start1Gchil6702.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004416_pilon 413465..413467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6702.t1.CDS1Gchil6702.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004416_pilon 413465..414964 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6702.t1.exon1Gchil6702.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004416_pilon 413465..414964 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6702.t1.stop1Gchil6702.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004416_pilon 414962..414964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6702.t1Gchil6702.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004416_pilon 413465..414964 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6702.t1 ID=Gchil6702.t1|Name=Gchil6702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=500bp
MLLTDLELRRAKENLTHFEQTFTQNQQEKLIPARYRLNLKLPHVSSFLNS
DDILVATLDMLQNTWKRLAKIQILIEDPKLQPFDHEFEVHQNAIIRIFFW
KQREPTYPIGNLVLSLTDLRMGADEKLLLLVEGLPRSKNIAEISVGWITP
KIEKVLLNVQVRVNKKKGWPFSKARVYYILYTWEPNGNTMWKPIYRSEIL
TNLSNDPCSKAPMNYTGAVIRMDGNKVDENQTRSFRIEFLHYKATRQSHK
ILGSSVFSLQQLRQTVVPYGRLYLKVSNIPESELVGALQLLKTTLEYGKS
SFRLEASFGGEISEDILYIDVEVLNKTRASVRRISFEISVYTDQGAWEKF
YGSEMSPNLAAGECHSFSVAKLSEKKLQAGATRRWISIAFSRREGGRQLQ
VGVANTTLSDLSSGQVLPLENEEGLLRVRTMDRVTNGSSKAHLALCYEYG
AEAPARENHVNDPMRMQQNPRNENRMPTERLFYSDYSRTDDSPCSSTSS*
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spliced messenger RNA

>Gchil6702.t1 ID=Gchil6702.t1|Name=Gchil6702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1500bp|location=Sequence derived from alignment at tig00004416_pilon:413465..414964+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTATTGACCGATCTGGAGCTTCGTCGCGCCAAAGAAAACCTCACTCA
TTTCGAACAAACCTTCACGCAAAACCAACAAGAAAAGCTTATTCCGGCAC
GGTACCGTCTCAATCTCAAACTCCCCCACGTCTCATCGTTCTTAAATTCA
GATGACATATTAGTTGCTACTCTTGATATGTTACAAAATACTTGGAAACG
ACTGGCAAAGATTCAAATCCTTATTGAAGACCCTAAGCTTCAACCGTTTG
ATCATGAATTTGAGGTGCACCAAAACGCAATCATTCGCATCTTTTTTTGG
AAGCAGAGAGAACCTACATACCCTATAGGAAATTTGGTATTGTCGTTGAC
AGATTTGCGTATGGGAGCTGATGAAAAATTGTTGTTGCTTGTTGAAGGAC
TTCCTCGTTCTAAGAACATTGCTGAAATCTCAGTGGGGTGGATTACGCCC
AAGATTGAAAAGGTTCTTTTAAATGTACAGGTTCGTGTGAATAAGAAAAA
AGGATGGCCATTTTCGAAAGCCAGGGTGTACTACATCCTATACACTTGGG
AACCAAACGGAAATACAATGTGGAAACCTATATATCGGTCTGAGATACTG
ACCAACTTGTCAAATGATCCATGTTCAAAAGCGCCCATGAACTATACTGG
AGCCGTAATACGGATGGACGGTAACAAGGTTGATGAGAATCAAACAAGAT
CATTTCGCATTGAATTCCTTCATTACAAGGCAACCCGTCAGTCTCACAAA
ATTCTCGGATCATCCGTGTTTAGTCTTCAGCAATTAAGACAAACTGTTGT
TCCGTACGGGCGTCTTTATTTGAAAGTTAGCAACATTCCGGAAAGCGAGC
TGGTCGGTGCGCTGCAACTCTTGAAGACAACGTTGGAATACGGGAAAAGT
TCCTTCAGACTTGAAGCATCGTTCGGCGGTGAGATCTCAGAAGATATACT
TTACATTGATGTTGAAGTGCTCAACAAGACAAGAGCGTCGGTGCGTCGAA
TATCGTTCGAAATAAGCGTGTACACCGATCAAGGCGCGTGGGAAAAGTTT
TACGGCTCTGAAATGTCTCCCAATCTTGCCGCTGGGGAATGCCACAGTTT
CTCCGTGGCAAAGCTGTCTGAGAAAAAGTTGCAGGCGGGCGCTACACGAC
GATGGATATCAATTGCATTTTCACGCCGAGAAGGTGGGCGACAACTTCAA
GTAGGCGTCGCAAACACCACGTTGTCAGATTTGTCAAGTGGCCAAGTTCT
GCCACTCGAGAATGAAGAGGGTCTATTGCGAGTACGAACAATGGACAGAG
TTACAAATGGAAGTTCGAAGGCTCATTTGGCACTTTGTTATGAATACGGT
GCTGAGGCGCCTGCGCGAGAGAATCACGTGAACGATCCGATGAGAATGCA
ACAAAACCCACGCAACGAAAACAGAATGCCGACTGAACGGCTTTTTTATT
CTGACTACTCTCGAACTGACGATTCTCCATGCAGTAGTACCAGCAGTTGA
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protein sequence of Gchil6702.t1

>Gchil6702.t1 ID=Gchil6702.t1|Name=Gchil6702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=500bp
MLLTDLELRRAKENLTHFEQTFTQNQQEKLIPARYRLNLKLPHVSSFLNS
DDILVATLDMLQNTWKRLAKIQILIEDPKLQPFDHEFEVHQNAIIRIFFW
KQREPTYPIGNLVLSLTDLRMGADEKLLLLVEGLPRSKNIAEISVGWITP
KIEKVLLNVQVRVNKKKGWPFSKARVYYILYTWEPNGNTMWKPIYRSEIL
TNLSNDPCSKAPMNYTGAVIRMDGNKVDENQTRSFRIEFLHYKATRQSHK
ILGSSVFSLQQLRQTVVPYGRLYLKVSNIPESELVGALQLLKTTLEYGKS
SFRLEASFGGEISEDILYIDVEVLNKTRASVRRISFEISVYTDQGAWEKF
YGSEMSPNLAAGECHSFSVAKLSEKKLQAGATRRWISIAFSRREGGRQLQ
VGVANTTLSDLSSGQVLPLENEEGLLRVRTMDRVTNGSSKAHLALCYEYG
AEAPARENHVNDPMRMQQNPRNENRMPTERLFYSDYSRTDDSPCSSTSS*
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mRNA from alignment at tig00004416_pilon:413465..414964+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6702.t1 ID=Gchil6702.t1|Name=Gchil6702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1500bp|location=Sequence derived from alignment at tig00004416_pilon:413465..414964+ (Gracilaria chilensis NLEC103_M9 male)
ATGTTATTGACCGATCTGGAGCTTCGTCGCGCCAAAGAAAACCTCACTCA
TTTCGAACAAACCTTCACGCAAAACCAACAAGAAAAGCTTATTCCGGCAC
GGTACCGTCTCAATCTCAAACTCCCCCACGTCTCATCGTTCTTAAATTCA
GATGACATATTAGTTGCTACTCTTGATATGTTACAAAATACTTGGAAACG
ACTGGCAAAGATTCAAATCCTTATTGAAGACCCTAAGCTTCAACCGTTTG
ATCATGAATTTGAGGTGCACCAAAACGCAATCATTCGCATCTTTTTTTGG
AAGCAGAGAGAACCTACATACCCTATAGGAAATTTGGTATTGTCGTTGAC
AGATTTGCGTATGGGAGCTGATGAAAAATTGTTGTTGCTTGTTGAAGGAC
TTCCTCGTTCTAAGAACATTGCTGAAATCTCAGTGGGGTGGATTACGCCC
AAGATTGAAAAGGTTCTTTTAAATGTACAGGTTCGTGTGAATAAGAAAAA
AGGATGGCCATTTTCGAAAGCCAGGGTGTACTACATCCTATACACTTGGG
AACCAAACGGAAATACAATGTGGAAACCTATATATCGGTCTGAGATACTG
ACCAACTTGTCAAATGATCCATGTTCAAAAGCGCCCATGAACTATACTGG
AGCCGTAATACGGATGGACGGTAACAAGGTTGATGAGAATCAAACAAGAT
CATTTCGCATTGAATTCCTTCATTACAAGGCAACCCGTCAGTCTCACAAA
ATTCTCGGATCATCCGTGTTTAGTCTTCAGCAATTAAGACAAACTGTTGT
TCCGTACGGGCGTCTTTATTTGAAAGTTAGCAACATTCCGGAAAGCGAGC
TGGTCGGTGCGCTGCAACTCTTGAAGACAACGTTGGAATACGGGAAAAGT
TCCTTCAGACTTGAAGCATCGTTCGGCGGTGAGATCTCAGAAGATATACT
TTACATTGATGTTGAAGTGCTCAACAAGACAAGAGCGTCGGTGCGTCGAA
TATCGTTCGAAATAAGCGTGTACACCGATCAAGGCGCGTGGGAAAAGTTT
TACGGCTCTGAAATGTCTCCCAATCTTGCCGCTGGGGAATGCCACAGTTT
CTCCGTGGCAAAGCTGTCTGAGAAAAAGTTGCAGGCGGGCGCTACACGAC
GATGGATATCAATTGCATTTTCACGCCGAGAAGGTGGGCGACAACTTCAA
GTAGGCGTCGCAAACACCACGTTGTCAGATTTGTCAAGTGGCCAAGTTCT
GCCACTCGAGAATGAAGAGGGTCTATTGCGAGTACGAACAATGGACAGAG
TTACAAATGGAAGTTCGAAGGCTCATTTGGCACTTTGTTATGAATACGGT
GCTGAGGCGCCTGCGCGAGAGAATCACGTGAACGATCCGATGAGAATGCA
ACAAAACCCACGCAACGAAAACAGAATGCCGACTGAACGGCTTTTTTATT
CTGACTACTCTCGAACTGACGATTCTCCATGCAGTAGTACCAGCAGTTGA
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Coding sequence (CDS) from alignment at tig00004416_pilon:413465..414964+

>Gchil6702.t1 ID=Gchil6702.t1|Name=Gchil6702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1500bp|location=Sequence derived from alignment at tig00004416_pilon:413465..414964+ (Gracilaria chilensis NLEC103_M9 male)
ATGTTATTGACCGATCTGGAGCTTCGTCGCGCCAAAGAAAACCTCACTCA
TTTCGAACAAACCTTCACGCAAAACCAACAAGAAAAGCTTATTCCGGCAC
GGTACCGTCTCAATCTCAAACTCCCCCACGTCTCATCGTTCTTAAATTCA
GATGACATATTAGTTGCTACTCTTGATATGTTACAAAATACTTGGAAACG
ACTGGCAAAGATTCAAATCCTTATTGAAGACCCTAAGCTTCAACCGTTTG
ATCATGAATTTGAGGTGCACCAAAACGCAATCATTCGCATCTTTTTTTGG
AAGCAGAGAGAACCTACATACCCTATAGGAAATTTGGTATTGTCGTTGAC
AGATTTGCGTATGGGAGCTGATGAAAAATTGTTGTTGCTTGTTGAAGGAC
TTCCTCGTTCTAAGAACATTGCTGAAATCTCAGTGGGGTGGATTACGCCC
AAGATTGAAAAGGTTCTTTTAAATGTACAGGTTCGTGTGAATAAGAAAAA
AGGATGGCCATTTTCGAAAGCCAGGGTGTACTACATCCTATACACTTGGG
AACCAAACGGAAATACAATGTGGAAACCTATATATCGGTCTGAGATACTG
ACCAACTTGTCAAATGATCCATGTTCAAAAGCGCCCATGAACTATACTGG
AGCCGTAATACGGATGGACGGTAACAAGGTTGATGAGAATCAAACAAGAT
CATTTCGCATTGAATTCCTTCATTACAAGGCAACCCGTCAGTCTCACAAA
ATTCTCGGATCATCCGTGTTTAGTCTTCAGCAATTAAGACAAACTGTTGT
TCCGTACGGGCGTCTTTATTTGAAAGTTAGCAACATTCCGGAAAGCGAGC
TGGTCGGTGCGCTGCAACTCTTGAAGACAACGTTGGAATACGGGAAAAGT
TCCTTCAGACTTGAAGCATCGTTCGGCGGTGAGATCTCAGAAGATATACT
TTACATTGATGTTGAAGTGCTCAACAAGACAAGAGCGTCGGTGCGTCGAA
TATCGTTCGAAATAAGCGTGTACACCGATCAAGGCGCGTGGGAAAAGTTT
TACGGCTCTGAAATGTCTCCCAATCTTGCCGCTGGGGAATGCCACAGTTT
CTCCGTGGCAAAGCTGTCTGAGAAAAAGTTGCAGGCGGGCGCTACACGAC
GATGGATATCAATTGCATTTTCACGCCGAGAAGGTGGGCGACAACTTCAA
GTAGGCGTCGCAAACACCACGTTGTCAGATTTGTCAAGTGGCCAAGTTCT
GCCACTCGAGAATGAAGAGGGTCTATTGCGAGTACGAACAATGGACAGAG
TTACAAATGGAAGTTCGAAGGCTCATTTGGCACTTTGTTATGAATACGGT
GCTGAGGCGCCTGCGCGAGAGAATCACGTGAACGATCCGATGAGAATGCA
ACAAAACCCACGCAACGAAAACAGAATGCCGACTGAACGGCTTTTTTATT
CTGACTACTCTCGAACTGACGATTCTCCATGCAGTAGTACCAGCAGTTGA
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