Gchil6778.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6778.t1
Unique NameGchil6778.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length295
Homology
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A2V3J1L7_9FLOR (FAS1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1L7_9FLOR)

HSP 1 Score: 275 bits (704), Expect = 2.490e-89
Identity = 143/225 (63.56%), Postives = 168/225 (74.67%), Query Frame = 0
Query:   61 SLSRRRPPPRMVAYPYTGSGYGAAGIPYANDRVGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFVPPSLPRKPA-FVSSTVLDVYANMLTPRQALGIDPLPEQS 284
            SLS     PRMVAYPYTGSGYGAAG+PYA DR GQ+F+QT  DDI+ T A +P FSTL ALL+ETGLDY+L K GP+T+LAP D AFAALL  H FA L  LLRPENR +LR VLAHHV+ G VSS AL  AG ++  +L G  +TLM +NKKLSAG AR++KTDVPC+NGV+HVIGS+L+P  F      RKP  F +STV +VY  M+TPRQALGID  P  S
Sbjct:   31 SLSTPTTAPRMVAYPYTGSGYGAAGVPYAGDRFGQAFKQTTEDDIVQTAAKVPIFSTLVALLQETGLDYELAKGGPFTVLAPPDAAFAALLDAHGFAKLGTLLRPENRAELRKVLAHHVVRGSVSSGALAAAGSITTVSLAGEAITLMGFNKKLSAGSARMIKTDVPCSNGVIHVIGSVLIPGSFEVQPAGRKPQYFFTSTVQEVYGPMITPRQALGIDAAPSGS 255          
BLAST of Gchil6778.t1 vs. uniprot
Match: R7QQ94_CHOCR (FAS1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ94_CHOCR)

HSP 1 Score: 270 bits (690), Expect = 4.290e-87
Identity = 134/221 (60.63%), Postives = 167/221 (75.57%), Query Frame = 0
Query:   65 RRPPPRM--VAYPYTGSGYGAAGIPYANDRVGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFV-PPSLPRKPAFVSSTVLDVYANMLTPRQALGIDPLPE 282
            RR   RM  + YPYTGSGYGAAG+PY  D VGQSFR++ T DI+ T A++P FSTL +LLRETGLDY+L K GP+T+ AP D AFA+LL+PH F  LAPLLRPENRG+L+ VLAHHV+ G VSS A++  G++   T  G  ++LM Y K++SAG A +VK D+PC NGV+HVI S+L+P  +  PP+ P K  F +STVLD+Y N LTPRQALGIDPLPE
Sbjct:   37 RRSSVRMSTITYPYTGSGYGAAGVPYGGDPVGQSFRESKTADIVQTAASVPVFSTLVSLLRETGLDYELAKGGPFTVFAPTDTAFASLLEPHGFKILAPLLRPENRGELKKVLAHHVIAGDVSSGAILANGKMDFVTTAGCPISLMGYGKRISAGSAAVVKADIPCTNGVIHVISSVLVPMSYEKPPTGPPKKNFFNSTVLDLYKNRLTPRQALGIDPLPE 257          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A1X6NIE1_PORUM (FAS1 domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIE1_PORUM)

HSP 1 Score: 230 bits (586), Expect = 8.780e-72
Identity = 118/214 (55.14%), Postives = 155/214 (72.43%), Query Frame = 0
Query:   71 MVAYPYTGSGYGAAGIPYANDRVGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRG-DLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFV-PPSLPRKPAFVSSTVLDVYANMLTPRQALGIDPLPE 282
            +V +PY  SGYG+AG+PY        +  T+T +I+ T+A +P FSTL +LL ETGLDY+L KAGP+TL AP D+AFA LL+PH+F TLA LLRPENR  +LR VLA+H+L G  ++ A+  +G ++ PTL G  +T+M Y KK++AG AR++K DV  +NGV+HV+ S+LLP  FV  P+ P  P F  STV DVYAN LTPRQ +GIDPLPE
Sbjct:   20 LVPFPYRSSGYGSAGVPYP------LYTATSTSNIVDTLADVPVFSTLRSLLAETGLDYELGKAGPFTLFAPTDEAFAGLLEPHSFTTLAGLLRPENRSTELRKVLAYHILQGSFAASAVCASGTVTGPTLAGVDLTVMGYGKKVTAGSARVIKADVAASNGVIHVVNSVLLPSTFVRQPTNPPSPKFFQSTVQDVYANTLTPRQRIGIDPLPE 227          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A291FEB4_GRIPA (LRC6 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB4_GRIPA)

HSP 1 Score: 211 bits (537), Expect = 4.360e-64
Identity = 107/220 (48.64%), Postives = 145/220 (65.91%), Query Frame = 0
Query:   70 RMVAYPYTGSGYGAAGIPYANDRVGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFVPPSL-PRKPAFVSSTVLDVYANMLTPRQALGIDPLPEQSVASS 288
            RM AYPYTGSGYG  G+PYAND+VGQ ++ T T +I+ T A++  FSTL  LL +TGLDY+L+K+GP+T+ AP +DAF  LL  H FA+  PLLRP N   LR VL +HV+ G   +  ++    +++ T+GG  VT+    +KL  G + +++ DV C+NGV+HVI S+L P  +V P + P+      S V DVY  MLTPRQALGID  PE    +S
Sbjct:   39 RMAAYPYTGSGYGGVGVPYANDKVGQLYKVTPTSNIVDTAASVSIFSTLVTLLAQTGLDYELKKSGPFTVFAPTNDAFTDLLNAHGFASFGPLLRPGNTDTLRDVLLYHVVRGTYDARDVVGKS-VTVETMGGDEVTISCMKRKLVVGSSAVIRKDVSCSNGVIHVIKSVLKPPSYVRPDIRPQSQPMPESIVQDVYGKMLTPRQALGIDAAPESGALTS 257          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A5J4ZA95_PORPP (FAS1 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZA95_PORPP)

HSP 1 Score: 199 bits (506), Expect = 1.630e-59
Identity = 101/214 (47.20%), Postives = 142/214 (66.36%), Query Frame = 0
Query:   73 AYPYTGSGYGAAGIPYANDRVGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANG-VMHVIGSLLLPDGFVPPSLPRKPAFVSSTVLDVYANMLTPRQALGIDPLPEQSV 285
            AYPYTGSGYG+AG+PY  D  G  ++ T    I  T A    F+T   LL E+G++  + +AGPYT+ AP DDAFAALL+PH+F  LA LLRPEN   LR VL HHV+ G  +S +LM    +++ +L G  +++M  NK ++AG A++V+ DVPCANG ++H + S+++P  +VP   P KP F  S + ++ A + TPRQALG+DP P + V
Sbjct:   42 AYPYTGSGYGSAGVPYGQDTYG--YKATTAKSITETAAQAGVFNTFVKLLNESGVEKLVEQAGPYTVFAPTDDAFAALLEPHSFNKLATLLRPENNDALRKVLMHHVIPGAFTSASLMDRA-VTVKSLAGEPISIMGLNKLVTAGTAKVVRADVPCANGCIIHAVSSVIIPPNYVPVPQPTKPVFPRSVIAEI-AKLPTPRQALGLDPAPSKIV 251          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A3D3VYP5_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D3VYP5_9PLAN)

HSP 1 Score: 106 bits (265), Expect = 5.490e-24
Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 0
Query:  101 ATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFVPPSLPRKPAFVSSTV 261
            A  DI+ T      F TL A ++  GL   L+  GP+T+ AP D+AFA L +     T+  LL+PEN+  L AVL +HV+ G+V +  +++    S  T+ G  VT+   N  +S   A++VKTD+ C+NGV+HVI S++LP      + P KP  V + V
Sbjct:   48 AESDIVDTAVGAGSFKTLVAAVKAAGLVETLKGKGPFTVFAPTDEAFAKLPK----GTVEDLLKPENKDKLVAVLTYHVVAGKVMAADVVKLK--SAKTVQGQEVTIAVANGGVSVDNAKVVKTDIGCSNGVIHVIDSVILPK-----ATPAKPDVVDTAV 197          
BLAST of Gchil6778.t1 vs. uniprot
Match: UPI0016765CC5 (fasciclin domain-containing protein n=1 Tax=Lysobacter xinjiangensis TaxID=546892 RepID=UPI0016765CC5)

HSP 1 Score: 104 bits (259), Expect = 1.150e-23
Identity = 62/142 (43.66%), Postives = 84/142 (59.15%), Query Frame = 0
Query:  101 ATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLP 242
            A  DI+ T  A   F TLAA L+  GL   L+ AGP+T+ AP D AFAAL       T+  LL+PENR  L A+L +HV+ GRV++  +  AG     T+ G  V + A    ++ G AR+VK DV  +NGV+HVI  +L+P
Sbjct:   40 ARADIVDTAVAAGQFKTLAAALQAAGLVDTLKGAGPFTVFAPTDAAFAAL----PAGTVENLLKPENREQLVAILTYHVVPGRVTASQV--AGMSKATTVQGGDVAIRATGGTVNVGDARVVKADVMASNGVIHVIDKVLMP 175          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A0M0K5Q4_9EUKA (Beta-ig-h3 fasciclin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5Q4_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 3.220e-23
Identity = 57/150 (38.00%), Postives = 87/150 (58.00%), Query Frame = 0
Query:   93 VGQSFRQTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLP 242
            V ++ R+ A  DI+ T  A   F TLAA L   GL   ++ AGP+T+ AP DDAFA L       T+  LL+PEN+  L A+L +HV+ G+V +  ++      + T+ G+  T+      +    A++V TD+ C+NGV+HVI S++LP
Sbjct:  297 VREAQRRAAAKDIVDTAVAAGSFKTLAAALGAAGLVETIKSAGPFTVFAPTDDAFAKL----PAGTVDDLLKPENKAKLAAILTYHVISGKVMASTVVTMDGQKVKTVNGAEATIKVGKDGVMVDGAKVVTTDIECSNGVIHVIDSVILP 442          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A4R4EJV5_9GAMM (Fasciclin domain-containing protein n=1 Tax=Lysobacter sp. N42 TaxID=2545719 RepID=A0A4R4EJV5_9GAMM)

HSP 1 Score: 103 bits (256), Expect = 3.490e-23
Identity = 65/145 (44.83%), Postives = 83/145 (57.24%), Query Frame = 0
Query:  101 ATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRL-SLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDG 244
            A  DI+ T      F TLAA L+  GL   L+  GP+T+ AP D AFAAL       TL  LLRPENR  L A+L +HV+ GRVS+    RA  L S  T+ G  + + A    LS   AR+V  DV  +NGV+HVI ++L+P G
Sbjct:   44 AQGDIVDTALHAGQFKTLAAALQAAGLVDTLKGPGPFTVFAPTDAAFAAL----PAGTLESLLRPENRAKLVAILTYHVVPGRVSA---SRAATLDSAATVQGGRLAIRASGSTLSVDGARVVAPDVAASNGVIHVIDTVLMPQG 181          
BLAST of Gchil6778.t1 vs. uniprot
Match: A0A7C2T749_9BACT (Fasciclin domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C2T749_9BACT)

HSP 1 Score: 101 bits (251), Expect = 1.270e-22
Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 0
Query:   99 QTATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAALLQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTLGGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDG 244
            Q    DI+ T  A   F+TLA +L+  GL   L+  GP+T+ AP D+AFA L       TL  LLRPEN+  L A+L +HV+ G++ +  +++   L     G   V++ A +  L    AR+VKTD+ C+NGV+HVI S++LP G
Sbjct:   25 QAPERDIVETAVAAGQFNTLAKVLQAAGLVETLKGKGPFTVFAPTDEAFAKL----PAGTLDSLLRPENKDRLTAILTYHVVPGKLLAADVVKQNSLKTVQGGSLRVSVKAGSNVL-VDNARLVKTDILCSNGVIHVIDSVVLPQG 165          
The following BLAST results are available for this feature:
BLAST of Gchil6778.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1L7_9FLOR2.490e-8963.56FAS1 domain-containing protein n=1 Tax=Gracilariop... [more]
R7QQ94_CHOCR4.290e-8760.63FAS1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6NIE1_PORUM8.780e-7255.14FAS1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A291FEB4_GRIPA4.360e-6448.64LRC6 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A5J4ZA95_PORPP1.630e-5947.20FAS1 domain-containing protein n=1 Tax=Porphyridiu... [more]
A0A3D3VYP5_9PLAN5.490e-2438.51Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
UPI0016765CC51.150e-2343.66fasciclin domain-containing protein n=1 Tax=Lysoba... [more]
A0A0M0K5Q4_9EUKA3.220e-2338.00Beta-ig-h3 fasciclin n=1 Tax=Chrysochromulina tobi... [more]
A0A4R4EJV5_9GAMM3.490e-2344.83Fasciclin domain-containing protein n=1 Tax=Lysoba... [more]
A0A7C2T749_9BACT1.270e-2240.41Fasciclin domain-containing protein n=1 Tax=Acidob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 138..243
e-value: 4.2E-13
score: 59.5
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 114..242
e-value: 4.8E-22
score: 78.5
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 102..240
score: 25.279097
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 83..243
e-value: 1.1E-30
score: 108.9
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 94..243
NoneNo IPR availablePANTHERPTHR10900PERIOSTIN-RELATEDcoord: 88..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1127839..1128723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6778.t1Gchil6778.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1127839..1128723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6778.t1 ID=Gchil6778.t1|Name=Gchil6778.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=295bp
MMRCRRSVLSPASVPPSPAPCLRISISATTAAMASSFSFTAPAFIAATPL
CVPAAAAPSPSLSRRRPPPRMVAYPYTGSGYGAAGIPYANDRVGQSFRQT
ATDDIMTTVAALPPFSTLAALLRETGLDYDLRKAGPYTLLAPFDDAFAAL
LQPHTFATLAPLLRPENRGDLRAVLAHHVLCGRVSSVALMRAGRLSLPTL
GGSHVTLMAYNKKLSAGPARIVKTDVPCANGVMHVIGSLLLPDGFVPPSL
PRKPAFVSSTVLDVYANMLTPRQALGIDPLPEQSVASSSSALAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf