Gchil6729.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6729.t1
Unique NameGchil6729.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Homology
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A2V3IHQ1_9FLOR (Importin subunit alpha n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ1_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 7.780e-32
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    2 QDLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            QDLRKGRF+KAI+ DEA RQR+DNLV IR AK +E+ MKK  E ++M S + +SA+ E +ST D N  LA+++ +RLP MVAGVFS+DPA+ IQA L FRR LSI+KNP
Sbjct:    8 QDLRKGRFKKAIDRDEARRQREDNLVGIRKAKREENLMKKRRERLNMSSAYPSSADAEPISTTDSNTPLAVQFHHRLPAMVAGVFSDDPADQIQATLEFRRLLSIEKNP 116          
BLAST of Gchil6729.t1 vs. uniprot
Match: R7QQU3_CHOCR (Importin subunit alpha n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQU3_CHOCR)

HSP 1 Score: 98.2 bits (243), Expect = 1.450e-21
Identity = 56/109 (51.38%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    2 QDLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            QDLR+GRF+KAI+ DEA RQR+D +V IR AK +E+ MKK  E M   S+F T  +++  +T+  N L A  Y  R+PQMVAGV S++P + +Q  L FRR LSI++NP
Sbjct:    8 QDLRRGRFKKAIDRDEARRQREDTMVGIRKAKREENLMKKRREKMG-ASSFGTPNDIDISATDSNNSLAATLYA-RMPQMVAGVLSDNPQDQVQHTLEFRRLLSIERNP 114          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A087HKH2_ARAAL (Importin subunit alpha n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HKH2_ARAAL)

HSP 1 Score: 67.4 bits (163), Expect = 9.350e-11
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ A++ DE  R+R+DN+V IR +K +E+  KK  E         T+A + S  T        L     +PQMVAGV S+D    ++A +GFR+ LSI++NP
Sbjct:   10 EVRRNRYKVAVDADEGRRRREDNMVEIRKSKREENLQKKRRE-------IPTTASMASSVTQQGQ---DLPRNESIPQMVAGVLSQDSNLQLEATIGFRKLLSIERNP 107          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A7J7E0U2_TRIWF (Importin subunit alpha n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7E0U2_TRIWF)

HSP 1 Score: 64.7 bits (156), Expect = 8.240e-10
Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ A++ DE  R+R+DNLV IR +K +E+  KK  E ++    FAT  +  ++           K    LP MVAG+ S+D    ++A   FR+ LSI+++P
Sbjct:   10 EVRRNRYKVAVDADEGRRRREDNLVEIRKSKREENLQKKRREGLAQAQPFATPLQSSALD----------KKLETLPNMVAGICSDDRNLQLEATTQFRKLLSIERSP 107          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A2Z6MMT9_TRISU (Importin subunit alpha n=22 Tax=fabids TaxID=91835 RepID=A0A2Z6MMT9_TRISU)

HSP 1 Score: 64.7 bits (156), Expect = 8.240e-10
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ A++ DE  R+R+DN+V IR  K +ES +KK  E +     F+T  +  S         +  K    LP MVAGV+S+D  + ++A   FR+ LSI+++P
Sbjct:   10 EVRRNRYKVAVDADEGRRRREDNMVEIRKNKREESLLKKRREGLQNQQQFSTPLQSSS---------IVEKKLESLPAMVAGVWSDDNNQQLEATTQFRKLLSIERSP 108          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A565AM63_9BRAS (IBB domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AM63_9BRAS)

HSP 1 Score: 64.3 bits (155), Expect = 1.170e-9
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ +++ DE  R+R+DN+V IR  K +E+  KK  E ++    ++ + +     ++ +           +PQMVAGV SED    + A  GFRR LSI++NP
Sbjct:   10 EVRRNRYKVSVDADEGRRRREDNMVEIRKNKREENLQKKRREVITPSMAYSATQQGLDFPSSRYE---------SIPQMVAGVLSEDRNLQLDATNGFRRLLSIERNP 108          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A7S0ZGT5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGT5_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 1.320e-9
Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    2 QDLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTN---DFNVLLALKYT----YRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            +D RK  ++KA++ DEA ++R+++ V IR +K +ES MKK  E +    T A + ++ S +     D + ++    T     RLP+M AG++S+DPA+  +  +  R+ LSI++NP
Sbjct:    8 EDFRKKGYKKALDADEARKKREEHQVEIRKSKKEESLMKKRREQLG-AGTSAAAGDLPSATAPTSIDSSAIVPSPATAAGLMRLPEMRAGLYSQDPADHYRCTMEIRKLLSIEQNP 122          
BLAST of Gchil6729.t1 vs. uniprot
Match: IMPA1_ARATH (Importin subunit alpha-1 n=14 Tax=Magnoliopsida TaxID=3398 RepID=IMPA1_ARATH)

HSP 1 Score: 63.9 bits (154), Expect = 1.540e-9
Identity = 40/110 (36.36%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTF--ATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ A++ +E  R+R+DN+V IR +K +ES MKK  E M     F  A++A V+             K    L  MVAGV+S+DPA  +++   FR+ LSI+++P
Sbjct:   10 EVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVD-------------KKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSP 106          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A7S1ES96_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ES96_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 1.560e-9
Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    2 QDLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTN---DFNVLLALKYT----YRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            +D RK  ++KA++ DEA ++R+++ V IR +K +ES MKK  E +    T A + ++ S +     D + ++    T     RLP+M AG++S+DPA+  +  +  R+ LSI++NP
Sbjct:    8 EDFRKKGYKKALDADEARKKREEHQVEIRKSKKEESLMKKRREQLG-AGTSAAAGDLPSATAPTSIDSSAIVPSPATAAGLMRLPEMRAGLYSQDPADHYRCTMEIRKLLSIEQNP 122          
BLAST of Gchil6729.t1 vs. uniprot
Match: A0A218XTC8_PUNGR (Importin subunit alpha n=5 Tax=Punica granatum TaxID=22663 RepID=A0A218XTC8_PUNGR)

HSP 1 Score: 63.5 bits (153), Expect = 2.090e-9
Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    3 DLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCSTFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGFRRGLSIDKNP 110
            ++R+ R++ A++ DE  R+R+DNLV IR +K +ES +KK  E +     F + A V + +          K    LPQMVAGV+S++    ++A   FR+ LSI+++P
Sbjct:   10 EVRRNRYKVAVDADEGRRRREDNLVEIRKSKREESLLKKRREGL-QAQQFPSPAAVHAANME--------KKLESLPQMVAGVWSDNGTLQLEATTQFRKLLSIERSP 108          
The following BLAST results are available for this feature:
BLAST of Gchil6729.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHQ1_9FLOR7.780e-3261.47Importin subunit alpha n=1 Tax=Gracilariopsis chor... [more]
R7QQU3_CHOCR1.450e-2151.38Importin subunit alpha n=1 Tax=Chondrus crispus Ta... [more]
A0A087HKH2_ARAAL9.350e-1137.04Importin subunit alpha n=1 Tax=Arabis alpina TaxID... [more]
A0A7J7E0U2_TRIWF8.240e-1034.26Importin subunit alpha n=1 Tax=Tripterygium wilfor... [more]
A0A2Z6MMT9_TRISU8.240e-1035.19Importin subunit alpha n=22 Tax=fabids TaxID=91835... [more]
A0A565AM63_9BRAS1.170e-933.33IBB domain-containing protein n=1 Tax=Arabis nemor... [more]
A0A7S0ZGT5_9RHOD1.320e-934.48Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
IMPA1_ARATH1.540e-936.36Importin subunit alpha-1 n=14 Tax=Magnoliopsida Ta... [more]
A0A7S1ES96_9RHOD1.560e-934.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A218XTC8_PUNGR2.090e-936.11Importin subunit alpha n=5 Tax=Punica granatum Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002652Importin-alpha, importin-beta-binding domainPFAMPF01749IBBcoord: 5..97
e-value: 4.1E-10
score: 40.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:644809..645153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6729.t1Gchil6729.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 644809..645153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6729.t1 ID=Gchil6729.t1|Name=Gchil6729.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MQDLRKGRFEKAINLDEAHRQRKDNLVRIRNAKSKESFMKKHGECMSMCS
TFATSAEVESMSTNDFNVLLALKYTYRLPQMVAGVFSEDPAEVIQAILGF
RRGLSIDKNPSSLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002652Importin-a_IBB