Gchil6713.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6713.t1
Unique NameGchil6713.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length332
Homology
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BLAST of Gchil6713.t1 vs. uniprot
Match: A0A2V3IHN2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN2_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 4.550e-14
Identity = 109/191 (57.07%), Postives = 134/191 (70.16%), Query Frame = 0 
Query:  137 RDSTLPLALSPSSKRFMK--SNGNPVY---RLRATLAHPFP--CRYCGDGFATREDRKEHVDEYHPRPHKCSVCLHQFSRKFDLEKHVLTVHERLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCFVYLCSLCDRGGNDRAWIVQHLEKLHAVKTSKVMALVAA 320
            ++ TLP + +   K+ +   + GN V    RLR     PF   C++C   F T++ RKEH+ + HP+P+ CS C  +FSRKFD EKH LTVHER+RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK F Y C LC+ G  +R   ++HL+  H V+       +A+
Sbjct:   83 KNHTLPPSNTTDFKKVVSKAAGGNAVTSEARLRTDHCSPFKYHCKFCPRRFETKKVRKEHMSDEHPKPYACSTCSGRFSRKFDYEKHYLTVHERIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKFNYSCVLCNSGFYERKVALEHLDNDHKVRVVNAAVFLAS 273
The following BLAST results are available for this feature:
BLAST of Gchil6713.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHN2_9FLOR4.550e-1457.07Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 198..221
e-value: 0.096
score: 21.8
coord: 171..194
e-value: 0.32
score: 20.0
coord: 227..250
e-value: 0.088
score: 21.9
coord: 256..279
e-value: 0.82
score: 18.7
coord: 284..307
e-value: 9.2
score: 13.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 200..221
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 229..250
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 173..194
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 258..279
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 198..226
score: 10.741022
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 171..199
score: 8.891327
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 256..279
score: 10.574757
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 227..255
score: 11.343733
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 223..253
e-value: 4.5E-6
score: 28.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 148..222
e-value: 9.7E-10
score: 40.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 254..310
e-value: 4.6E-6
score: 28.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..106
NoneNo IPR availablePANTHERPTHR24377IP01015P-RELATEDcoord: 98..298
NoneNo IPR availablePANTHERPTHR24377:SF809IP01015P-RELATEDcoord: 98..298
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 207..265
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 169..221
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 254..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:435918..436913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6713.t1Gchil6713.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 435918..436913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6713.t1 ID=Gchil6713.t1|Name=Gchil6713.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=332bp
MGQVLSSCQHLLSASTTLPPLQTSVPFEALPDDVDSLQAYQVRSEQSTAF
ERKTDHALADYSQSTNCRREPVDKITWTKDKRNADIPSRSTPSPITQSSI
TEHQNESHQHLGMRVGALSKYDERSALGNTSIVSSERDSTLPLALSPSSK
RFMKSNGNPVYRLRATLAHPFPCRYCGDGFATREDRKEHVDEYHPRPHKC
SVCLHQFSRKFDLEKHVLTVHERLRPFKCDKCRSSFGQKHHLMRHLNSVH
FKAKMHKCARCSSKFTRKEHLENHSRSVHKCFVYLCSLCDRGGNDRAWIV
QHLEKLHAVKTSKVMALVAAANNCEDSESSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf