Gchil1406.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1406.t1
Unique NameGchil1406.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length457
Homology
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A2V3ILE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILE0_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 6.040e-28
Identity = 81/210 (38.57%), Postives = 112/210 (53.33%), Query Frame = 0
Query:  220 GEGDPHLKGFDGSSFDFHGEAGKNYILFGDGSGDLLVSKMRNAPAKKQKDLFPRTYFDAFGLQFGRKDNCQRGSKVSVSLDLEEGSANNWTQVVRLNGKRITSNYKNGPIQISMKQQMHFVTVTTSSNVYTFHAHLHQ--QWRHQDVTLTLKGSPGAAVHFRGMLGWTLNRKLGYRFPVDLFQLKGDHK-EMSLRRHFEVPSLFPISQGD 426
            G GDPHL GFDG +FDFHG  G+ Y LFG   GD+LV+K+R+A  +  K+   +TYFD FGL+    ++      +SVSL L++G  ++W  V+ LNG  +  +       I      H  TVTT    + F A   +  + RH D+ +TL G P     + G+LG TLNR LG     +    + D   E ++R  FEV SLF   Q D
Sbjct:  130 GRGDPHLTGFDGHTFDFHGVHGRFYSLFGRLGGDVLVTKIRSAK-QWAKNGIEKTYFDQFGLRVLNSNDL-----ISVSLKLDDGHGDSWHPVLELNGDEVQHDVYLDQAHILTDTHDHSFTVTTRETQFVFRAARFEDKKRRHLDIEVTLVGEPHPTHQYLGLLGHTLNRALGRETLPEFAVTERDVSIETAMRERFEVDSLFAQPQHD 333          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A2V3J5C3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C3_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 5.520e-27
Identity = 81/205 (39.51%), Postives = 107/205 (52.20%), Query Frame = 0
Query:  220 GEGDPHLKGFDGSSFDFHGEAGKNYILFGDGSGDLLVSKMRNAPAKKQKDLFPRTYFDAFGLQFGRKDNCQRGSKVSVSLDLEEGSANNWTQVVRLNGKRITSNYKNGPIQISMKQQMHFVTVTTSSNVYTFHAHLHQ--QWRHQDVTLTLKGSPGAAVHFRGMLGWTLNRKLGYRFPVDLFQLKGDHK-EMSLRRHFEVPSLFP 421
            G GDPHL GFDG  FDFHG  GK Y  FG  SGD+LV+++R+A  +  K    +TYFD FGL+    D+     ++SVSL  ++G +  W   ++LN + +      G  QI        VTV T+   Y F          RH DV + L GSP  +  + G+LG TLN  LG     +L   + D + E  LR  FEV SLFP
Sbjct:  130 GRGDPHLNGFDGKIFDFHGVHGKYYAFFGRSSGDMLVTRIRSAK-RWAKTGVEKTYFDEFGLKTSGSDD-----RISVSLVEDKGQSGVWNAELKLNDEIVDHEITLGSTQIKRDAVDGSVTVRTAETEYVFRPKYLDIAARRHLDVEIGLVGSPQTSESYVGVLGVTLNHALGKEISAELGTTERDAEFEQVLRGRFEVASLFP 328          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A2V3J5F3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5F3_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 1.030e-22
Identity = 74/211 (35.07%), Postives = 108/211 (51.18%), Query Frame = 0
Query:  220 GEGDPHLKGFDGSSFDFHGEAGKNYILFGDGSGDLLVSKMRNAPAKKQKDLFPRTYFDAFGLQF-GRKDNCQRGSKVSVSLDLEEGSANNWTQVVRLNGKRITSNYKNGPIQISMKQQMHFVTVTTSSNVYTFHAHLHQQW--RHQDVTLTLKGSPGAAVHFRGMLGWTLNRKLGYRFPVDLFQLKGDHK-EMSLRRHFEVPSLFPISQGD 426
            G+GDPHL GFDG  FDFHG  GK Y  FG   GD+L++++R+A       +  +TYFD FGL+  G  D+      VSVSL  +  +   W   +R+NG  + + +++    +   +    ++V T    Y F A        RH DV ++L G+P  +  + G+LG TLN  +G     ++  LK     E +LR  FEV SLF     D
Sbjct:  134 GKGDPHLTGFDGKMFDFHGVHGKYYAFFGRAGGDMLITRIRSAKMWAGNGI-EKTYFDQFGLKTAGSTDD------VSVSLAQKNDNPTVWQGELRVNGNVVANEFESDSFSVKRDEIKGLISVRTGECEYKFIAKRTDDAARRHLDVEVSLHGTPQRSGTYVGVLGVTLNHAMGKEVKSEIRTLKNAVALEKALRERFEVDSLFSDVSAD 337          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A2V2D9A5_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V2D9A5_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 2.010e-17
Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   77 YEDLDFDPDGPGLKTTGVFNMGEIGTVSNIRDESFRVTEEQYPEGPGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAI 200
            Y +LDFDP G  L    + +       S IRDES  +T + +P     +NE DAFRH YF+ RL+Q++G+E AK ++DAYEIS  N++  R MDL NNR GR++ ED       +T+++ K A+
Sbjct:   76 YTELDFDPSGNSLYLVSLKDPFGALYASEIRDESVALTGKLFPGVEAVDNEADAFRHAYFSFRLSQKIGSERAKKFTDAYEISYINKMGGRCMDLWNNREGRRMYED------TKTSESDKKAL 193          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A7Y7D4S9_9HYPH (Uncharacterized protein n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A7Y7D4S9_9HYPH)

HSP 1 Score: 88.2 bits (217), Expect = 1.020e-16
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 0
Query:   77 YEDLDFDPDGPGLKTTGVFNMGEIGTVSNIRDESFRVTEEQYPEGPGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGED-NGDASPAETAQAVKDAIDNGDGNIMTSP 211
            YE+ DFDP G G K  GV N  + G      + +  VT + +      NNE DAFRH Y++  +TQ +GA+ AK   +++EI+  N   ER+MDL NNR GRQ+  D      PAE  + +++AI   DG + TSP
Sbjct:   39 YEEFDFDPRGDGQKMFGVKNPIDGGRAYLDANTANEVTSKLFKGVKPHNNEADAFRHAYWSYLMTQNIGADKAKHAGNSHEITEENTEGERLMDLYNNRIGRQLALDPKNKGRPAE--EVIREAIK--DGKLRTSP 170          
BLAST of Gchil1406.t1 vs. uniprot
Match: UPI001E41C9DA (hypothetical protein n=1 Tax=Nocardia farcinica TaxID=37329 RepID=UPI001E41C9DA)

HSP 1 Score: 88.2 bits (217), Expect = 1.040e-15
Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   89 LKTTGVFNMGEIGTVSNIRDESFRVTEEQYPEGPGRNNEK-------DAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAIDNGDGNIMTSPPNCG 215
            L T+G+    ++ T  +I+DE+       +P+   + NEK       DAFRH Y+NAR+TQE GA+    ++  +E+   N      MDL NN+ GR IG +N DASP E  Q V +AIDN    ++ S P+ G
Sbjct:  152 LATSGLDGPAKLKTFYDIQDEASTAAANAFPDLSEKANEKALSDGHADAFRHMYWNARMTQEFGADWTNTFASGHEMIGSNPAAREAMDLYNNQLGRAIGANNPDASPEELQQKVLEAIDNNQAVVIQSSPDGG 285          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A1G3IS36_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 TaxID=1802023 RepID=A0A1G3IS36_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 1.230e-14
Identity = 49/148 (33.11%), Postives = 83/148 (56.08%), Query Frame = 0
Query:   66 STEDREWINSE--YEDLDFDPDGPGLKTTGVFNMGEIGTVSNIRDESFRVTEEQYPEGPGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAIDNGDGNIMTSP 211
            + + RE ++ E  Y  ++FDP+G  L    +    +    + +  E  ++TE++YP     NNE DAFRH Y++  + ++ G E AK++ DA+E S+ N   ER+MDL NN+ GR +  D  +A   +    +++AI   +G + TSP
Sbjct:   66 APDSREPVDPEDFYRKVEFDPNGEKLWEAALRRPLDARQANELETEVTKITEKEYPGVIPHNNEADAFRHAYWSFEIARKAGPEAAKEFGDAHERSDSNPTPERLMDLYNNKVGRDLAADPVNAD-RDGRDVIREAIR--EGKLRTSP 210          
BLAST of Gchil1406.t1 vs. uniprot
Match: UPI0007A739A2 (hypothetical protein n=1 Tax=Nocardia fusca TaxID=941183 RepID=UPI0007A739A2)

HSP 1 Score: 83.2 bits (204), Expect = 1.830e-14
Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  104 SNIRDESFRVTEEQYPEG--PGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAIDNGDGNIMTSPPNCGGDADGEGDPHLKGFDGSSFDFHGEAGKNYILFGD 249
            +N+ DE+    EE YP+    G  N   AFRH Y+NAR+TQE G E  + +  A+E S  N      MDL NN+ GR+IG DN DASP E    +K  I++G+  +M          DGEG P +  +  S           Y+ FGD
Sbjct:   86 ANMVDEAKSAAEENYPQSLDDGHGN---AFRHIYWNARMTQEFGPEWTETYGTAHEKSGGNPPNREAMDLFNNQIGREIGADNPDASPEELQHIIKSKIESGEVLVMAPK-------DGEGSPPVITWSNSDI--------KYLEFGD 215          
BLAST of Gchil1406.t1 vs. uniprot
Match: A0A1V9ACU0_9PSEU (Uncharacterized protein n=2 Tax=Saccharomonospora piscinae TaxID=687388 RepID=A0A1V9ACU0_9PSEU)

HSP 1 Score: 84.3 bits (207), Expect = 5.820e-14
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 0
Query:  106 IRDESFRVTEEQYPE-GPGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAIDNGDGNIM 208
            ++ ES+ V+EEQYP      ++  DAFRH Y+NAR+TQE G E A+ ++ ++E    N ++   MDL+NN  GR+I  DN DASP + AQ V DA+  G+  ++
Sbjct:  274 MQQESYVVSEEQYPGIEHTTHSHTDAFRHAYWNARMTQEFGQEWAEGFATSHERRPGNDMQSEAMDLHNNELGRRIAADNPDASPEQLAQLVGDAVSQGEAIVI 377          
BLAST of Gchil1406.t1 vs. uniprot
Match: H0K4S5_9PSEU (Uncharacterized protein n=2 Tax=Saccharomonospora azurea TaxID=40988 RepID=H0K4S5_9PSEU)

HSP 1 Score: 83.2 bits (204), Expect = 1.390e-13
Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   99 EIGTVSNIRDESFRVTEEQYPEGPGRNNEKDAFRHTYFNARLTQELGAENAKDWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAIDNGDGNIM 208
            E+ T   ++ E++ V+EE++      ++  DAFRH Y+NAR+TQE G E A+ ++ A+E    N ++   MDL+NN  GR+I   N DASP E AQ V DA++ G+  ++
Sbjct:  267 EMYTWYRVQQEAYVVSEERFDLEHTTHSHTDAFRHAYWNARMTQEFGEEWAEAFATAHEQRPTNDMQSEAMDLHNNELGRRIAVQNPDASPEELAQLVTDAVNQGETIVL 376          
The following BLAST results are available for this feature:
BLAST of Gchil1406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILE0_9FLOR6.040e-2838.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C3_9FLOR5.520e-2739.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5F3_9FLOR1.030e-2235.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V2D9A5_9BACT2.010e-1742.74Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A7Y7D4S9_9HYPH1.020e-1640.44Uncharacterized protein n=1 Tax=Methylocystaceae b... [more]
UPI001E41C9DA1.040e-1538.06hypothetical protein n=1 Tax=Nocardia farcinica Ta... [more]
A0A1G3IS36_9PROT1.230e-1433.11Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
UPI0007A739A21.830e-1437.84hypothetical protein n=1 Tax=Nocardia fusca TaxID=... [more]
A0A1V9ACU0_9PSEU5.820e-1443.27Uncharacterized protein n=2 Tax=Saccharomonospora ... [more]
H0K4S5_9PSEU1.390e-1340.00Uncharacterized protein n=2 Tax=Saccharomonospora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..456
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:666007..667377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1406.t1Gchil1406.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 666007..667377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1406.t1 ID=Gchil1406.t1|Name=Gchil1406.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=457bp
MTPTFFFSTICTIFFVLNITATALPVNYRNKLSQAAIPTTDFDGVTKLPQ
VVRYGYEGSGDCGNESTEDREWINSEYEDLDFDPDGPGLKTTGVFNMGEI
GTVSNIRDESFRVTEEQYPEGPGRNNEKDAFRHTYFNARLTQELGAENAK
DWSDAYEISNPNQIEERIMDLNNNRAGRQIGEDNGDASPAETAQAVKDAI
DNGDGNIMTSPPNCGGDADGEGDPHLKGFDGSSFDFHGEAGKNYILFGDG
SGDLLVSKMRNAPAKKQKDLFPRTYFDAFGLQFGRKDNCQRGSKVSVSLD
LEEGSANNWTQVVRLNGKRITSNYKNGPIQISMKQQMHFVTVTTSSNVYT
FHAHLHQQWRHQDVTLTLKGSPGAAVHFRGMLGWTLNRKLGYRFPVDLFQ
LKGDHKEMSLRRHFEVPSLFPISQGDCYRNNLGQWVESTGLPNMTGRNLL
RATAKN*
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