Gchil1404.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1404.t1
Unique Name	Gchil1404.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	208

Homology

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BLAST of Gchil1404.t1 vs. uniprot
Match: A0A2V3IME8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME8_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 1.090e-89
Identity = 123/188 (65.43%), Postives = 152/188 (80.85%), Query Frame = 0

Query:   20 GGHTPLTANQGVTYSKCEVRGDAGLCRFGFKDLWGVFDHVQWGSGNYSLKGTHSGAFTPKIIHKDPDFYDAEVGYIKVDDSLRDVYTCETEFDNEDLTFSNTKCRYLTIPGWLFSTAKLPGERGSGVSRSHEWALRRYVPNGACILMYVTEYEVVDTSVSPPRVREVRRMSARQARVENNCVLFYAQF 207
            G  T L  NQGVTY  CEV+GD GLCRF FKDL+G FDHV+WGSGN+SLKG+HSG+FTP+I+ K P+++D+E+G +K  D  RDV+TCE E+ N    + + +C YL IPG LF+  ++ G RGSG+SRS E ALRR+VPNGAC+LMY+TEYE++DTSVSPPRVREV RM ARQAR+ENNCVLFYAQF
Sbjct:   21 GQETGLAINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEH-RCTYLNIPGRLFNAVRIRGTRGSGISRSREHALRRHVPNGACVLMYLTEYEILDTSVSPPRVREVVRMPARQARIENNCVLFYAQF 207

[Close]

BLAST of Gchil1404.t1 vs. uniprot
Match: A0A2V3IB93_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IB93_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 9.250e-45
Identity = 67/119 (56.30%), Postives = 89/119 (74.79%), Query Frame = 0

Query:   20 GGHTPLTANQGVTYSKCEVRGDAGLCRFGFKDLWGVFDHVQWGSGNYSLKGTHSGAFTPKIIHKDPDFYDAEVGYIKVDDSLRDVYTCETEFDNEDLTFSNTKCRYLTIPGWLFSTAKL 138
            G  T L  NQGVTY  CEV+GD GLCRF FKDL+G FDHV+WGSGN+SLKG+HSG+FTP+I+ K P+++D+E+G +K  D  RDV+TCE E+ N    + + +C YL IPG LF+  ++
Sbjct:   21 GQETGLAINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEH-RCTYLNIPGRLFNAVRI 138

The following BLAST results are available for this feature:

BLAST of Gchil1404.t1 vs. uniprot

BLAST of Gchil1404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IME8_9FLOR	1.090e-89	65.43	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IB93_9FLOR	9.250e-45	56.30	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..207
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004414_pilon	contig	tig00004414_pilon:653434..654057 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1404.t1	Gchil1404.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004414_pilon 653434..654057 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1404.t1 ID=Gchil1404.t1|Name=Gchil1404.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=208bp
MNNNFLLCLVVLLTLQRGLGGHTPLTANQGVTYSKCEVRGDAGLCRFGFK
DLWGVFDHVQWGSGNYSLKGTHSGAFTPKIIHKDPDFYDAEVGYIKVDDS
LRDVYTCETEFDNEDLTFSNTKCRYLTIPGWLFSTAKLPGERGSGVSRSH
EWALRRYVPNGACILMYVTEYEVVDTSVSPPRVREVRRMSARQARVENNC
VLFYAQF*