Gchil2782.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2782.t1
Unique NameGchil2782.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length216
Homology
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A2V3IGR4_9FLOR (Ras-related protein Rab-11B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR4_9FLOR)

HSP 1 Score: 379 bits (972), Expect = 4.510e-132
Identity = 189/215 (87.91%), Postives = 200/215 (93.02%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+NTFESV RWLKELKDHADSKIVVMLVGNKCDLKNER+VS++ GTEAA KFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVV G+IGE++ DP GEPIKLE   +     +++KCC
Sbjct:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKENTFESVPRWLKELKDHADSKIVVMLVGNKCDLKNEREVSIQQGTEAATKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVHGSIGEQASDPRGEPIKLEPSATSAKNARAAKCC 215          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A5J4Z794_PORPP (Ras-related protein Rab-11B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z794_PORPP)

HSP 1 Score: 275 bits (703), Expect = 4.260e-91
Identity = 139/216 (64.35%), Postives = 171/216 (79.17%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHG-EPIKLEALPSRKTATKSSKCC 215
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GKI+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK TFE+V+RWLKELKDHAD+ IV+MLVGNK DL++ R V+ E+GT+ +A   LSF+ETSALDATNV+E+F ++L +I+ I +   +       +   +  E I ++        +KSSKCC
Sbjct:    1 MARPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKGTFENVSRWLKELKDHADANIVIMLVGNKSDLQHLRAVTTEEGTKFSAGNSLSFIETSALDATNVNEAFTRILTEIYRIVSKKTLEKNSNAPAMSNNSFETIVIQNPTDEPAKSKSSKCC 216          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A6U0NGV1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A6U0NGV1_9VIRI)

HSP 1 Score: 272 bits (695), Expect = 6.130e-90
Identity = 136/215 (63.26%), Postives = 167/215 (77.67%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            MA+ ++EYDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+ + GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  T+E+V RWLKEL+DHADS IV+MLVGNK DL++ R V+ +D    A K GLSF+ETSAL++TNV+ +F+++L +I+ I +   +    G+  P P     K+E  P+ +T  K S CC
Sbjct:    1 MAKADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFALESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVMMLVGNKSDLRHLRAVATDDAAAFAEKEGLSFIETSALESTNVELAFQKILTEIYRIVSKKTIGADEGDAGPGPG---TKIEINPTAQTKKKDSSCC 212          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A7S2AH65_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AH65_9CHLO)

HSP 1 Score: 271 bits (692), Expect = 2.300e-89
Identity = 141/217 (64.98%), Postives = 169/217 (77.88%), Query Frame = 0
Query:    2 ARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLE--ALPSRKTATKS-SKCC 215
            ++ +D+YDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+PI GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  TFE+V RWLKEL+DHAD+ IV+MLVGNK DL++ R VS E+      K GLSF+ETSAL++TNV+ SFKQ+LE+I+ I + N ++   G  +  P G  I +         +A+KS SKCC
Sbjct:    3 SKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSLPIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKTVTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRAVSTEEAAAFCEKEGLSFIETSALESTNVELSFKQILEEIYGIVSKNRMASEEGPSASVPKGNTIAITPGGGDDSSSASKSKSKCC 219          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A1X6NM24_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM24_PORUM)

HSP 1 Score: 270 bits (691), Expect = 2.660e-89
Identity = 135/215 (62.79%), Postives = 167/215 (77.67%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+  +GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TFE + RWLKEL D+AD  IV+ LVGNK DL++ R V+ +DGT  +AK  +SF+ETSALD +NV+E+F ++L +I+ I +S  +     E+  +P  + I++    +     KSSKCC
Sbjct:    1 MARTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRLTFEGIERWLKELTDNADPNIVIALVGNKADLQHLRAVTADDGTALSAKHQVSFIETSALDGSNVEEAFTRILTEIYRIASSKTLDKGTSEQF-NPSAQTIQINQNTAEDNKPKSSKCC 214          
BLAST of Gchil2782.t1 vs. uniprot
Match: M2Y664_GALSU (Rab family, other n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y664_GALSU)

HSP 1 Score: 270 bits (691), Expect = 2.750e-89
Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            MAR++DEYDYLFKIVLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFAT+SV  +GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK +F  V +WLKEL+DHADS IV+MLVGNK DLK+ R VS E+G E A K  LSF+ETSALDATNV+++F Q+L +I+ I     ++           GE + +   P+    T   KCC
Sbjct:    1 MARSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNEKNPSFKPALGESVVVRD-PAEDKGTHKKKCC 214          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A1Y2F408_PROLT (Ras family-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F408_PROLT)

HSP 1 Score: 270 bits (689), Expect = 4.680e-89
Identity = 140/216 (64.81%), Postives = 171/216 (79.17%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDP-HGEPIKLEALPSRKTATKSSKCC 215
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GK +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+ TFE+V RWLKEL+DHAD+ IV+MLVGNK DLK+ R V  E+GT+ A +  LSF+ETSALDA+NV+ +F  +L +I+N+ +S  +  A  E  P P  G+ I + A P+ K   + SKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQPTFENVQRWLKELRDHADTSIVIMLVGNKSDLKHLRAVPTEEGTQFATENNLSFIETSALDASNVEGAFHSILTEIYNLVSSKALDPA--ENGPRPGDGQRITMTAAPADK---QGSKCC 210          
BLAST of Gchil2782.t1 vs. uniprot
Match: R4X6B5_TAPDE (Putative Ras GTPase Rab11 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X6B5_TAPDE)

HSP 1 Score: 269 bits (687), Expect = 9.430e-89
Identity = 140/215 (65.12%), Postives = 169/215 (78.60%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ +  K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+NTFE+V RWLKEL+DHADS IV+MLVGNK DL++ R V  E+    AA+  LSF+ETSALDA+NV+ +F+ +L +I+NI +S  +  + G   P   G+ I +   PS +   KSSKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQNTFENVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKTFAAENNLSFIETSALDASNVEGAFQNILTEIYNIVSSRALDPSDGALRPTD-GQKIAITNAPSEE---KSSKCC 210          
BLAST of Gchil2782.t1 vs. uniprot
Match: E1ZTE2_CHLVA (Uncharacterized protein n=3 Tax=Chlorellaceae TaxID=35461 RepID=E1ZTE2_CHLVA)

HSP 1 Score: 268 bits (685), Expect = 2.410e-88
Identity = 135/216 (62.50%), Postives = 167/216 (77.31%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKL-EALPSRKTATKSSKCC 215
            + + +D+YDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+ + GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TFE+V RWLKEL+DHAD+ IV+MLVGNK DL++ R V  ED      + GLSF+ETSAL+ATNV+++F+++L +I++I +   ++   G  +    G  IK+ EA P  K   K S CC
Sbjct:    2 VPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALASEDGPAAAPTSGTAIKVTEAAPEAK---KKSTCC 214          
BLAST of Gchil2782.t1 vs. uniprot
Match: A0A0N0NIG2_9EURO (Ras-related protein Rab-11B n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N0NIG2_9EURO)

HSP 1 Score: 267 bits (683), Expect = 4.090e-88
Identity = 134/213 (62.91%), Postives = 170/213 (79.81%), Query Frame = 0
Query:    4 NEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVV-SGAIGERSPDPHGEPIKLEALPSRKTATKSSKCC 215
            + DEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L+SK+TIGVEFATRS+ +  K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K  T+++V RWLKEL+DHAD+ IV+MLVGNK DL++ R V  E+  + A++  LSF+ETSALDA+NV+ +F+ +L +I+ I +S  + SG  G+ +P   G  +K++  PS  T  KSSKCC
Sbjct:    3 SSDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGEQGQGAP---GSGVKIDMTPSGTTDNKSSKCC 212          
The following BLAST results are available for this feature:
BLAST of Gchil2782.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGR4_9FLOR4.510e-13287.91Ras-related protein Rab-11B n=1 Tax=Gracilariopsis... [more]
A0A5J4Z794_PORPP4.260e-9164.35Ras-related protein Rab-11B n=1 Tax=Porphyridium p... [more]
A0A6U0NGV1_9VIRI6.130e-9063.26Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S2AH65_9CHLO2.300e-8964.98Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
A0A1X6NM24_PORUM2.660e-8962.79Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2Y664_GALSU2.750e-8964.65Rab family, other n=1 Tax=Galdieria sulphuraria Ta... [more]
A0A1Y2F408_PROLT4.680e-8964.81Ras family-domain-containing protein n=1 Tax=Proto... [more]
R4X6B5_TAPDE9.430e-8965.12Putative Ras GTPase Rab11 n=1 Tax=Taphrina deforma... [more]
E1ZTE2_CHLVA2.410e-8862.50Uncharacterized protein n=3 Tax=Chlorellaceae TaxI... [more]
A0A0N0NIG2_9EURO4.090e-8862.91Ras-related protein Rab-11B n=1 Tax=Phialophora at... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 53..75
score: 52.74
coord: 12..33
score: 55.67
coord: 115..128
score: 51.56
coord: 35..51
score: 28.66
coord: 150..172
score: 38.55
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..214
e-value: 6.2E-5
score: 21.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 1.9E-101
score: 353.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 3.7E-27
score: 106.2
NoneNo IPR availablePANTHERPTHR47978:SF12OS03G0843100 PROTEINcoord: 1..215
NoneNo IPR availablePANTHERPTHR47978FAMILY NOT NAMEDcoord: 1..215
NoneNo IPR availablePROSITEPS51420RHOcoord: 5..176
score: 9.728954
NoneNo IPR availablePROSITEPS51419RABcoord: 7..215
score: 34.385048
NoneNo IPR availableCDDcd01868Rab11_likecoord: 9..173
e-value: 1.164E-120
score: 337.225
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 14..175
e-value: 9.1E-11
score: 18.6
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 8.3E-61
score: 204.3
IPR001806Small GTPasePROSITEPS51421RAScoord: 4..215
score: 18.628572
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 4.9E-37
score: 125.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..188
e-value: 9.3E-70
score: 236.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:496158..496931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2782.t1Gchil2782.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 496158..496931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2782.t1 ID=Gchil2782.t1|Name=Gchil2782.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=216bp
MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFAT
RSVPIQGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFE
SVARWLKELKDHADSKIVVMLVGNKCDLKNERQVSVEDGTEAAAKFGLSF
LETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGERSPDPHGEPIKLE
ALPSRKTATKSSKCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase