Gchil2829.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2829.t1
Unique NameGchil2829.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length166
Homology
The following BLAST results are available for this feature:
BLAST of Gchil2829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009617Seipin familyPFAMPF06775Seipincoord: 3..119
e-value: 4.3E-14
score: 52.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..149
NoneNo IPR availableTMHMMTMhelixcoord: 127..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:777131..777628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2829.t1Gchil2829.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 777131..777628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2829.t1 ID=Gchil2829.t1|Name=Gchil2829.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=166bp
MELLLQLPETRVNQQHAVFGVSTALHADAQPTALATARARGAQKFRSPCA
RALRALALAVPLLLGAPVETQRVRVALMTQRVRRDAPVPTRLRVTIDAPL
HVAAASLRVRGTPRSVRVVLAHRARALLAAALAFTAFVALAAAAVLLVAR
RAWRALRPAVAAVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009617Seipin