Gchil5742.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5742.t1
Unique NameGchil5742.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length278
Homology
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A2V3IUR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 320 bits (820), Expect = 2.280e-107
Identity = 138/230 (60.00%), Postives = 167/230 (72.61%), Query Frame = 0
Query:   48 GPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPITPANF 277
            GPC LK  KGGYSNF S   PA  Y RGQ   +KYHRNNHGPGGFIRLSLV  +  M K +H +NAFHYSCWGA    A   ELSTD FGF  +GNDGE HSAP  YY +F T+P+C+PDG Y+LGWVWFGGT   PI+DN   +P   G+F DYWACSYV ++GGA L  SC+PVFVNDM  FS+ GCM+ N++PGVC+ EPC    F+R+P+ F++G +PP +TP+ F
Sbjct:   19 GPCQLKAAKGGYSNFGSTINPAREYQRGQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A2V3J1Z2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 316 bits (810), Expect = 3.750e-104
Identity = 142/264 (53.79%), Postives = 186/264 (70.45%), Query Frame = 0
Query:   19 ALCHSTISQPQPFSPGYCRLDDIADA---NCPGPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQP--WGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPITPANF 277
            A  HS +++PQ  SP  CR+   A +   NC GPCDL+ I+GGY+N  SPD P+AVYSRGQ IT+KY RNNHGPGGFIRL++V     MDKA+HE+NAFHYSCWGA P  A   EL TD+FG++ +GNDGE+H    GYYVA +++P+ IPDG+YVLGWVWFGG GS P+  N    PQP   GY+ D W+C+YV + GG  L  +  P F ND+  ++ +GC++AN++PG+C  EPC     F++PR+F+ G  P P+TP NF
Sbjct:    2 AAAHSIMTEPQSVSPRDCRVGGEAKSGIDNCHGPCDLRAIQGGYANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLTP-NF 264          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A2V3IS62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 3.870e-98
Identity = 145/270 (53.70%), Postives = 178/270 (65.93%), Query Frame = 0
Query:   15 IVQSAL--CHSTISQPQPFSPGYCRLDDIADA---NCPGPCDLKGI--KGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPITPANF 277
            + Q+AL   HS ++QPQ  SP  CRL   A     NC GPCDL+ I  K  Y+NF +P  PAA YSRGQ +TIKY RNNH PGGFIR++ V+P   MD+  H +NAFHYSCWGA PV A   EL  D+FGFT+ G+DG +H    GYYV  IT+P  +PDG+YVLGW W+GGTG N         P  + YFGDY++CS+V VRGG     +  P F+NDM  FS+ GCMS+ +  G CA+EPC   AFFRRPR F +G  PPP+TPA F
Sbjct:   16 VCQTALVSAHSQMTQPQSTSPKTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGGE-YTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALF 284          
BLAST of Gchil5742.t1 vs. uniprot
Match: R7QEV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 298 bits (762), Expect = 1.820e-96
Identity = 130/226 (57.52%), Postives = 165/226 (73.01%), Query Frame = 0
Query:   52 LKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPITPANF 277
            ++ I+GGYSNF+SPD PAAVY RGQT+ +KY RNNHGPGGFIRL+LV PE  MDK  H +NAF+Y+CWGA P AA   E+  D FGF+ +G+DGE+HS P GYYV  + +P  +PDG YVLGWVW+GG G +  + N Q +P P+GYFGDYW+CSYV + GG+ L     PVF NDM  +S  GCMSAN+APGVC+ EPC V + ++ PR F++G  P  +TP  F
Sbjct:    1 MRAIEGGYSNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGS-AEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQF 225          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A2V3IFC9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 258 bits (658), Expect = 6.760e-81
Identity = 106/174 (60.92%), Postives = 129/174 (74.14%), Query Frame = 0
Query:  104 MDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPITPANF 277
            M+KA+H+ NAFHYSCWGA PV A++ EL  D +GFT +G+DGE+H AP GYY   +T+P CIPDGNYV+GWVWFGGTG   I+ N+  +P+PWGYFGDYWACS+V V GG PL  S  PVF NDM  +S +GCMSANN PG CA EPC V   +++PR F  G  P P+TP NF
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 174          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A1X6P3E1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E1_PORUM)

HSP 1 Score: 159 bits (402), Expect = 1.560e-41
Identity = 95/264 (35.98%), Postives = 127/264 (48.11%), Query Frame = 0
Query:   19 ALCHSTISQPQPFSP-GYCRLDDIADA--NCPGPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVTAFFRR--PRSFENGGQPPPITPANF 277
            A  HS +S P P S    CR+  +     +CPGPC     +   S+ N    PAA+Y RG    +++ RNNH  GG +R ++V      D   HE+NAFH+SCW          + + D +  T   N   K           + +P  +PDG+YVLGW W+GG G  P+             FGDY+ CSYV V GG PL     P F  D    ++  C+S  N PG+C +EPC    + RR  P  FE G  PPPI  +NF
Sbjct:   35 AAAHSFLSMPLPISRLDGCRIGGVGGTPGHCPGPCPNSDFRPDTSSKN----PAAIYRRGSQYEVRWTRNNH-EGGIVRWAMVPVSEMWDMGSHERNAFHWSCWNINRFKCGAMDHNRDCYFDT--SNMAFKDQ---------LRIPNNLPDGDYVLGWTWYGG-GEGPVGKQ--------AIFGDYYDCSYVRVEGGNPLADKHIPTFSGD----ATGTCLSTVNRPGICKREPCAPMPYVRRRVPVEFEGGRHPPPIYASNF 269          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A1X6PKH5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKH5_PORUM)

HSP 1 Score: 149 bits (375), Expect = 3.700e-39
Identity = 87/233 (37.34%), Postives = 125/233 (53.65%), Query Frame = 0
Query:   45 NCPGPCDLKGIKGGYSNFNSPDK--PAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANT-TELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPW-GYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPC-EVTAFFRRPRSFENGGQPPPI 272
            NCPGPC   G   GY+  +  D+  P AV++RG+++ I++ RNNH  GGF+RL+LV  ++  + A+H++ AFHY C+ + P    T TE   D       G   EK+ A    +   + +P+ IP+G YVLGW W+GG  +N           PW GY+GDY++CSYV + GG PL  S  P +           C ++    G C  EPC +     R P  FE+G  PPP+
Sbjct:    3 NCPGPCPNSG---GYALRDGLDETTPTAVWARGESVEIRWARNNH-EGGFVRLALVPLKYRDNAAMHKKYAFHYQCFRSDPFTCKTKTERLVD-------GWFDEKNVA----FKTHVKVPRNIPNGIYVLGWAWYGGLHTN----------MPWTGYYGDYYSCSYVRIHGGGPLSWSHQPTWWTGRSSLFKNVCETSTTRIGECPSEPCVDHPRQLRVPEEFESGAVPPPL 210          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A1X6PHC2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHC2_PORUM)

HSP 1 Score: 142 bits (358), Expect = 7.370e-36
Identity = 90/270 (33.33%), Postives = 132/270 (48.89%), Query Frame = 0
Query:   26 SQPQPFSPGY---CRLDDIADA--NCPGPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGA---IPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPC----------EVTAFFRRPRSFENGGQPPPITPANF 277
            S   P S  Y   CR+     A  NCPGPC    ++  +   +SP +PAA Y RGQT+T+++ RNNH  GGF+R +LV      D   HE  AF + CW A   +  A N  +L  D+          EK +     ++    +P+ +PDG+YVL + W+GG     ++DN  ++      FGDY+ CSYV + GG+PL  +    F   +    +  C+S+ N+ G C  EPC            T     P+ F NG  PPP+T + +
Sbjct:   38 SMTVPLSISYTTDCRVGGPRHAFRNCPGPCPNVMLR-THGVGSSPQEPAATYHRGQTVTVRWARNNH-EGGFVRWALVPVTRMNDPVAHEHFAFRWGCWSAGRFVCSAENRRKLCIDD-------RLDEKWAQAFSEHM---EVPKVVPDGDYVLSFAWYGG-----VRDNKPLRRPVLSSFGDYYDCSYVRISGGSPLEATAPRPFNTGIGTRFADRCVSSVNSLGKCVVEPCTKDGTASGESRFTGGEMVPKEFTNGMTPPPLTSSMY 290          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A1X6NK98_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK98_PORUM)

HSP 1 Score: 139 bits (351), Expect = 5.070e-35
Identity = 84/266 (31.58%), Postives = 117/266 (43.98%), Query Frame = 0
Query:   12 LMAIVQSALCHSTISQPQPFSPGYCRLDDIAD--ANCPGPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELST--DNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDM-KLFSSKGCMSANNAPGVCAKEPCEVTAFFRRPRSFENGGQPPPI 272
            L+ +   A  HST+++PQ  +   CRL         C GPC   G +       S + PA  ++RG   +  Y RN H   GF+R++LV     M    H + AFHY CWGA  +   T   +   D       G D      P        T+P   PDG+Y+ GWVW+GG G +P      +      +F DYW CSYV ++GG  L P+    FV    +      C+S+ + PGV   EP        R      G +PPP+
Sbjct:   32 LLTVPAPAGAHSTMNRPQVTNNNECRLGGKGPHTGTCRGPC---GPEYAAVTHTSSEAPATTWARGSRQSYSYLRNGHRRSGFVRITLVPVGDKMRHDAHTRFAFHYGCWGAGALINCTGSAAAKGDIASAEYCGTDTAMFRHPF-------TVPTVYPDGDYIFGWVWYGGGGDDPDNHGSLIS-----FFADYWQCSYVRIKGGMALTPNATAQFVTGPGEPTDDPRCLSSVSRPGVAGPEPVNGRPLTLRKPDVFTGDRPPPV 282          
BLAST of Gchil5742.t1 vs. uniprot
Match: A0A1X6PIU7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIU7_PORUM)

HSP 1 Score: 139 bits (350), Expect = 8.350e-35
Identity = 92/271 (33.95%), Postives = 123/271 (45.39%), Query Frame = 0
Query:   22 HSTISQPQPFSPGY-CRLDDIADAN----------CPGPCDLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKPEHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSAPIGYYVAFITLPQCIPDGNYVLGWVWFGG--TGSNPIQDNDQMKPQPWGYFGDYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEPCEVT--AFFRRPRSFENGGQPPPITPANF 277
            HS +S P P S  + CR+     +           CPGPC     +       SP  PAAVY RG    +++ RNNH  GGF R +LV      +KA H++ AFH+SCW       N  +   D            ++      +   I +P  +P+G+YVLGW W+GG  TG                +FGDY+ CSYV V GG PL     P        F+ +GC +  N PGVC  EPC       F+RP  F+ G  PPPI  ++F
Sbjct:   39 HSFLSMPVPMSRMHGCRMGTSTLSGNGPQAGRLGRCPGPCPNSDFRPD----TSPGNPAAVYRRGGRYQVRWTRNNH-EGGFTRWALVPINQMNNKAAHQKFAFHWSCWNINRFTCNRMDHQRDC-----------QYDRNNKAFKDHIRIPANLPNGDYVLGWSWYGGGRTGGRA-------------HFGDYFDCSYVRVEGGKPLQEKHIPT-------FAGRGCHATVNRPGVCKSEPCRPLRKVTFKRPAEFD-GRTPPPIYASSF 272          
The following BLAST results are available for this feature:
BLAST of Gchil5742.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUR8_9FLOR2.280e-10760.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z2_9FLOR3.750e-10453.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS62_9FLOR3.870e-9853.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV6_CHOCR1.820e-9657.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFC9_9FLOR6.760e-8160.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P3E1_PORUM1.560e-4135.98Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PKH5_PORUM3.700e-3937.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PHC2_PORUM7.370e-3633.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NK98_PORUM5.070e-3531.58Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A1X6PIU7_PORUM8.350e-3533.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.70.50.70coord: 22..248
e-value: 8.5E-6
score: 27.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1283564..1284455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5742.t1Gchil5742.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1283564..1284455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5742.t1 ID=Gchil5742.t1|Name=Gchil5742.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=278bp
MVPMQYTLGVTLMAIVQSALCHSTISQPQPFSPGYCRLDDIADANCPGPC
DLKGIKGGYSNFNSPDKPAAVYSRGQTITIKYHRNNHGPGGFIRLSLVKP
EHTMDKAIHEQNAFHYSCWGAIPVAANTTELSTDNFGFTIIGNDGEKHSA
PIGYYVAFITLPQCIPDGNYVLGWVWFGGTGSNPIQDNDQMKPQPWGYFG
DYWACSYVHVRGGAPLLPSCNPVFVNDMKLFSSKGCMSANNAPGVCAKEP
CEVTAFFRRPRSFENGGQPPPITPANF*
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