Gchil1566.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1566.t1
Unique NameGchil1566.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1060
Homology
BLAST of Gchil1566.t1 vs. uniprot
Match: A0A2V3J393_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J393_9FLOR)

HSP 1 Score: 462 bits (1189), Expect = 9.950e-142
Identity = 439/1151 (38.14%), Postives = 578/1151 (50.22%), Query Frame = 0
Query:   14 DDREQRKLPHTLSFLNNVQNAIAAIEHRLEHNPSAHPPPPQRNEYPAHHGNNRDDIYTATVKHLEPPVM-----IPQHNSASDPPLSSAQ--PQAVLSRQSTFSSLGIDEAVSVTSDYNVSATSPSPVQRFGGSSTTRSIADIVQHFESNTTNRMSA-DGAKHPSSTSIAPIVHRLDAEQRLSDASKPVP------------SIASIVQQFQ---RPVHSKSSVSF-------------------------------AEEAD-----------------------TIYAASKDDIIAFEDDIDLSSVGATIDPSEFDFLPDEAERASQRALSVASTSR-SELDVPESTTPTSPSDSSYAVGQTAST-VAKP----GEGVTDDDGDA---FEGSATNVDALAKSLHVDADNLDITDESVAHAIETLDTYSKAAGIPASQ------HAAAESIQHTVSAEKHRSAITSADGVDAKQPHNHAQQDTSTPFDKSSGGEHMREKSGDMTNSPVQTQVPA-QASDDFDRAQPSVSKPVVEKSHIPEVESNSRSFTITSTTVSTEIENDSQLERVSVIETVMTSTTNQNR--DTDNYALELTTEAYSTVTLNPSPKQGTDEEQDSQSAMSAVLVDSAPINSPSEHKISEMDGAAAAPVPPANVASVATLSEVRKVDEYSESVALAPDSKTVSLAAEDVRKQDGSISNSEYGTEGKVVREYADGASERPSEKHDSPPAVALHEGTSDATESAMAETPIPADAGTSVQRASVPVLQREISPVDLQDETIDSEVREPQEIVFHTKT-PCPENES----VPSNGDLSKSKALNAEKTHMKTETRRTLTPSRIPRGSHHTTSPANLSASSTKTERLEGDVGTVPRRHLGGAMTTTSLSPGSRIMSSRLPPSRASSSGTLSPSSRSAATSPKGLSPLRGRGTSSVASQQQSRR---LSLGTSRKFSNDRKSVKLPRVAELLNARNRDRGSSSPGDRLPRGSTFNGAPPIGSGA--QLGMMRRAGTASSPVTPNNRPKPSPQGVADIGPLNVPLRRTLSFNNNRRATLSPGSLRGAAASSKLQEARGMPGAGRSRRATLSETGKPPRRPITIPEPFHLTGAELQAKARRQLEEQIRKREEMERRRRVFKARPMPDFSHPSPKPHL 1059
            +D     LP TLSF+NNVQNA+A IE RL H PSAHPPPPQRNEYPA   N R+ +Y AT+KHL+ PV+     I  +N ++D   ++ +      LS QSTFS   I+EAVSVTSDY VS  + SP+ R  GSST RSIADIVQHFES    + S  D   HP++  IAPIV RLD      + S   P            SIASIV+QFQ   +P  S S+                                  A+++D                       +  + +KDD     D  DLSSVGA  DPSEF+FL +E E  +QR  S +S +   E    E+TTP  P+  S ++G + +  V KP    G+   D    A   FEGS  +VDAL+KSL VDA+ L++T+ESVA AI+TLD++S+AAGI   +       A  ES    V+  K+ S  T A       P   + Q+ S P   ++        + D         VPA Q S++   +QP   + V+EK+   E E ++R FT TST VS E  +D  +E    +E     ++ +NR   T + AL           +     + +++ Q    +M     +SAPI                 P   A V+S  TLSE   V E  +S A+  +S  V         Q    SN  + T    VR     A E+ S++    P+  L   +S A  +A              ++   P    E    D Q    D  V +  +     KT     NE+     P + D   S +++ ++  + +       P    + S    S A+ S +  K ER   ++ +  R    G+ T  + SP +R +S+RLP                    PKGLSPL   G SS+  Q   RR    +  TSR  +NDRK VKLPRVAELL AR+RDR S+ P  R+PRGSTF+G PP  S +  Q    RR GT+SSPVTPNNRP+ SPQG+AD+ PL  PLRRT+SFNNNRRATLSP SLRG AASS+L E RG+PG   SRRATLSET +PPR  +TIPEPF LTGAELQAKA +QLEEQ R+        RVFKARPMPDFS+P P+P+ 
Sbjct:   14 EDEPSPNLPQTLSFINNVQNAVATIEQRLVHTPSAHPPPPQRNEYPAPPDNTREHMYAATIKHLDKPVLSTDLHIAPNNVSADHTTTNTRLSVDGSLSEQSTFS---IEEAVSVTSDYQVSTITGSPLPRIHGSST-RSIADIVQHFESTLQAQHSVRDNQLHPANAPIAPIVDRLDT----GNTSHSTPRDNAHFEQNARSSIASIVKQFQHAKQPTESNSNTXXXXXXXXXXXXXXXXXSPSKDTNTQQKNVREQAKQSDVPNDLESIERGSVGKRIASFNSQSAKSDTKDDEEETNDG-DLSSVGAIADPSEFEFLHEETEGITQRTGSPSSINNIPERHHVEATTP--PAAVSMSMGASVTPYVEKPAEVIGQATPDIQSSAKVPFEGSTVDVDALSKSLQVDAEALEVTEESVARAIQTLDSFSEAAGIEPQRSEIMDPQAVQESDISGVNESKNVSVPTDA-------PSEISDQEKSVPMINTNSETPEPTVNHDTARD---ASVPAVQTSNEMTESQP---RTVIEKTSA-ETEPSARPFTDTSTPVSNEKGSDLSVES-GPVEATKAHSSQENRMIPTADSAL-----------MRDGHVRDSEQPQGVHVSMERETRESAPI-----------------PRYEATVSSSQTLSEQVPV-EVKDSPAVENESANV---------QPHVQSNDSFATGESDVRSSIRSALEK-SDEDSKQPSTGLASRSSRARMAA--------------EKLGNPATSTEFHATDSQKSCSDRGVEKVDDTRLSEKTISLSTNEAEVLIAPGSAD---SGSIDLDQGSVGSS------PKLKSKKSPPMRSVAHTSTAGAKKERTVSELRSTTRSRASGSRTPMAQSPRTRPLSARLPQXXXXXXXXXXXXXXXXXXXPKGLSPLSRAGPSSL--QLHGRRGGVANSATSRSLANDRKPVKLPRVAELLTARSRDRTSAPPAGRIPRGSTFSGTPPRSSVSPGQSTASRRMGTSSSPVTPNNRPRSSPQGMADVTPLQAPLRRTMSFNNNRRATLSPSSLRGGAASSRLHEMRGLPGGAGSRRATLSETRRPPRHRVTIPEPFQLTGAELQAKALKQLEEQRRRXXXXXXXXRVFKARPMPDFSNPMPRPNF 1074          
The following BLAST results are available for this feature:
BLAST of Gchil1566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J393_9FLOR9.950e-14238.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1018..1045
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 859..890
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1023..1046
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 979..1005
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1023..1059
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..944
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..777
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 955..970
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 955..974
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 717..732

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:969162..972341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1566.t1Gchil1566.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 969162..972341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1566.t1 ID=Gchil1566.t1|Name=Gchil1566.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1060bp
MDAHRSSASSLRDDDREQRKLPHTLSFLNNVQNAIAAIEHRLEHNPSAHP
PPPQRNEYPAHHGNNRDDIYTATVKHLEPPVMIPQHNSASDPPLSSAQPQ
AVLSRQSTFSSLGIDEAVSVTSDYNVSATSPSPVQRFGGSSTTRSIADIV
QHFESNTTNRMSADGAKHPSSTSIAPIVHRLDAEQRLSDASKPVPSIASI
VQQFQRPVHSKSSVSFAEEADTIYAASKDDIIAFEDDIDLSSVGATIDPS
EFDFLPDEAERASQRALSVASTSRSELDVPESTTPTSPSDSSYAVGQTAS
TVAKPGEGVTDDDGDAFEGSATNVDALAKSLHVDADNLDITDESVAHAIE
TLDTYSKAAGIPASQHAAAESIQHTVSAEKHRSAITSADGVDAKQPHNHA
QQDTSTPFDKSSGGEHMREKSGDMTNSPVQTQVPAQASDDFDRAQPSVSK
PVVEKSHIPEVESNSRSFTITSTTVSTEIENDSQLERVSVIETVMTSTTN
QNRDTDNYALELTTEAYSTVTLNPSPKQGTDEEQDSQSAMSAVLVDSAPI
NSPSEHKISEMDGAAAAPVPPANVASVATLSEVRKVDEYSESVALAPDSK
TVSLAAEDVRKQDGSISNSEYGTEGKVVREYADGASERPSEKHDSPPAVA
LHEGTSDATESAMAETPIPADAGTSVQRASVPVLQREISPVDLQDETIDS
EVREPQEIVFHTKTPCPENESVPSNGDLSKSKALNAEKTHMKTETRRTLT
PSRIPRGSHHTTSPANLSASSTKTERLEGDVGTVPRRHLGGAMTTTSLSP
GSRIMSSRLPPSRASSSGTLSPSSRSAATSPKGLSPLRGRGTSSVASQQQ
SRRLSLGTSRKFSNDRKSVKLPRVAELLNARNRDRGSSSPGDRLPRGSTF
NGAPPIGSGAQLGMMRRAGTASSPVTPNNRPKPSPQGVADIGPLNVPLRR
TLSFNNNRRATLSPGSLRGAAASSKLQEARGMPGAGRSRRATLSETGKPP
RRPITIPEPFHLTGAELQAKARRQLEEQIRKREEMERRRRVFKARPMPDF
SHPSPKPHL*
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