Gchil1648.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1648.t1
Unique NameGchil1648.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length297
Homology
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A2V3IFN2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN2_9FLOR)

HSP 1 Score: 177 bits (449), Expect = 4.070e-50
Identity = 124/285 (43.51%), Postives = 164/285 (57.54%), Query Frame = 0
Query:   24 KPLESNATPLFRVRKRSQKARKKRSLERNKG-GVDEDEG--ISKTDLLLLKEAQVMREKIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQ-QETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEG--------RPKSSNSACIEDKSHAIFGLSKGSSSDPNTTYCQQGHRQTHQAAQTDIPNTKKRRFRHATDNLVADRFRKRWRR 296
            K LES   P+FR RKR++KAR +R  E     G  +D+G  +SKTDLLL+K+ Q+MREK R +ALD  L+G KR S   Q +     NN A +GLRN                      IRKKFG  +E       SH+ +EE LY IPE+L+VE+R QYDP +GMPTAGVEE+ELPE VR KNE++T+ A++KLEEQ    G        R    N   +   S +      GS+   + ++ ++   + H   +T   + KKRRF+ ATD +VADRFRKRWRR
Sbjct:   39 KTLESAPAPVFRARKRARKARHRRPREEQSDHGESDDDGTEVSKTDLLLIKQVQMMREKSRTSALDITLAGSKRSSSDNQ-QGSTKRNNNADVGLRNXXXXXXXXXXXXXXXXXXXXXXIRKKFGDHREQEKDASKSHEPEEEALYNIPENLRVEDRLQYDPAQGMPTAGVEEVELPEAVRLKNEMDTIVAQKKLEEQSAKRGLESTVCDPRMADENQEHVRPASPST-ARKHGSTKRISQSF-EKREAELHHMQRTSSKDGKKRRFQQATDKIVADRFRKRWRR 320          
BLAST of Gchil1648.t1 vs. uniprot
Match: R7Q4X6_CHOCR (Protein C9orf78, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X6_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 3.600e-35
Identity = 109/285 (38.25%), Postives = 162/285 (56.84%), Query Frame = 0
Query:   34 FRVRKRSQKARKKRSLERN----KGGVDEDEGISKTDLLLLKEAQVMREKIRLAALD-TGLSGRKRKSYPEQAEVENDGN-NTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQE--TGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKSSNSACIED-KSHAIFGLSKGSSSDPNTTYCQQGHRQTHQAAQTDIPNT-------------KKRRFRHATDNLVADRFRKRWRR 296
             R R +S K R KR L+      K   + ++ ++  +LLL+++AQ MRE+ R  ALD TG  G KR    E+ E  N  + +     L+++FAVERS + MEE M+ +I +G++KKFG ++  T  S ++ +   E +L+A+PE LKVE+R QYDPG+G+P AGVEE+ELPE VR++N  ET+RA  KL     +E R +  ++  +     +     SK  S         +GH   ++  Q +I N              K+ R++ ATD LVADRF+KRWRR
Sbjct:   16 LRRRTKSTKKRAKRVLDDEVDTPKNLSNSEKEMTAAELLLMRKAQQMREESRKIALDITG--GEKRHRDGEKTEKANPSSVDNVISDLKDDFAVERSGHDMEERMEKFINDGMKKKFGDKDDHTITSARDGNTADEFDLFAVPERLKVEQRPQYDPGDGLPAAGVEEVELPEDVRQRNIEETVRAHRKL-----LEKRDERLSTPILASIPGNVSANYSKHRSDWIAEHVGPKGHDSGNEPVQ-NISNVSGDGKGKVRDDTVKRPRYQAATDYLVADRFKKRWRR 292          
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A7S0FZ82_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ82_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 3.860e-15
Identity = 59/189 (31.22%), Postives = 103/189 (54.50%), Query Frame = 0
Query:   33 LFRVRKRSQKARKKRSLERNKGGVDEDEGISKT---------DLLLLKEAQVMREKIRLAALDTG--LSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRA 210
            LF+ +K S+K  + R +E      DE+  ++K          +L  L EAQ +R++ R    D    +SG  +++  ++ E          +GL+ NFA ER +  +E+ ++ YI++ +  K G     G L  +    E++LY +PE L+VE+R  YDPGEG+P AG+EE+++ +  R+++ I+T  A
Sbjct:   22 LFKKKKSSKKRLRSRGVEEI-SKEDEEGNVNKKGESASEVGENLAPLLEAQKLRQRQRRWTADASQAVSGIPKRTVEDEEEA-------LVVGLKTNFATEREDEDLEQQLEKYIDDQMVAK-GYTVAKGGLVTAPANPEDDLYHVPEALRVEKRIAYDPGEGLPAAGLEEVDIDDEARKRSHIKTEEA 201          
BLAST of Gchil1648.t1 vs. uniprot
Match: UPI00053C4E07 (uncharacterized protein C9orf78 homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4E07)

HSP 1 Score: 65.9 bits (159), Expect = 8.420e-9
Identity = 57/177 (32.20%), Postives = 93/177 (52.54%), Query Frame = 0
Query:   52 NKGGVDEDEGISKTDLLLLKEAQVMRE-KIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQ-ETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKS 226
            +KG   ++E   +  L  +K  Q  RE K+ + AL T  +   +    E++E + +      L L++ FA E +  V + +M  YIE+ + KK G+  +T   ++N     E+ LY IPEHLKV++R   +      T G+ E++LP   + KN IE   A +KL ++  + GRPKS
Sbjct:   21 SKGIASDEEEQRRLALEEVKFLQKQRERKLGIPALPTAQNSVGKVKTTEKSEGDGE---KEELVLQDTFAQETAVLVEDPNMVKYIEQELAKKRGKNLDTSDQVENELKRVEDELYRIPEHLKVKKRSSEESSTQW-TTGIAEVQLPIEYKLKN-IEETEAAKKLLQEKRLMGRPKS 192          
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A0D3C733_BRAOL (Uncharacterized protein n=6 Tax=Brassiceae TaxID=981071 RepID=A0A0D3C733_BRAOL)

HSP 1 Score: 65.1 bits (157), Expect = 1.550e-8
Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 0
Query:   70 LKEAQVMRE-KIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQ-ETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKS 226
            +K  Q +RE K+ + AL T  +   +    E+AE E +      L L++ FA E +  + + +M  Y+E  + KK G+  E    ++N     E+ LY IP+HLKV++R   +      T G+ E++LP   + KN IE   A +KL ++  + GRPKS
Sbjct:   40 VKFLQKLRERKLGIPALSTAQNSTGKGKPAEKAEAEGE---KEELVLQDTFAQETAVLIEDPNMVKYVEHELAKKRGKSLEDAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQW-TTGIAEVQLPIEYKLKN-IEETEAAKKLLQEKRLMGRPKS 193          
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A7J9LS78_GOSSC (Uncharacterized protein n=13 Tax=Malvoideae TaxID=214907 RepID=A0A7J9LS78_GOSSC)

HSP 1 Score: 64.3 bits (155), Expect = 3.000e-8
Identity = 77/277 (27.80%), Postives = 131/277 (47.29%), Query Frame = 0
Query:   38 KRSQKARKKRSLERNKG----GVDEDEGISKTDLLLLKEAQVMRE-KIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQ-ETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKSSNSA--------------CIEDKSHAIFGLSKGSSSDPNTTYCQQGHRQTHQAAQ-TDIPNTKKRRFRHATDNLVADRFRKR 293
            K++ K  +KRS++ ++G     + +DE   +  L  +K  Q  RE K  + A+ +  +G       E+AE + +      L L++ FA E +  V + +M  Y+E+ + KK G+  +    ++N     E+ LY IPEHLKV++R   +      T G+ E++LP   + +N IE   A +KL ++  + GR KS  S                 E    A+  +S   +  P   Y  +G +  + A++ TD  N      + ATD  + +RFRKR
Sbjct:    3 KKNNKNFRKRSIQEDEGDDPASISDDEEDRRLALEEVKFLQKQRERKSGIPAIPSVQTGGIVAKVTEKAEADGE---KEELVLQDTFAQETAVLVEDPNMIKYVEQELAKKRGRNMDLKNEVENDLTRAEDELYKIPEHLKVKKRNSEESSTQW-TTGIAEVQLPIEYKLRN-IEETEAAKKLLQEKRLMGRAKSEVSIPSSYSADYFQRGRDYAEKLRRAVNPISFELAEHPEL-YKDRGSQDDNAASKPTDASNEAAGSRQAATDQFMLERFRKR 273          
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A8B8J8J1_PHODC (protein COP1 SUPPRESSOR 2 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8J8J1_PHODC)

HSP 1 Score: 62.4 bits (150), Expect = 1.120e-7
Identity = 57/183 (31.15%), Postives = 94/183 (51.37%), Query Frame = 0
Query:   45 KKRSLERNKGGVDEDEGISKTDLLLLKEAQVMRE-KIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKS 226
            +KRSLE++    DE+E   +  L  +K  Q  RE K  + AL T  S  +R      A+ E +      L L++ FA E +  V + +M  Y+E+ + K+ G++   G  +    + E  LY +PEHLKV++R   +      T G+ E++LP   + +N IE   A +KL ++  + G+ KS
Sbjct:    7 RKRSLEQDPDSEDEEE--RRLVLEEVKFLQKQRERKPGIPALPTAESAPRRPGEKADADGEKED-----LVLQDTFAQETAVTVEDPNMLKYVEQELAKRRGKKIDAGDKEEKDPMDE--LYVVPEHLKVKKRNSEESSTQW-TTGIAEVQLPIEYKLRN-IEETEAAKKLLQEKRLVGKTKS 178          
BLAST of Gchil1648.t1 vs. uniprot
Match: UPI0009E33C4F (LOW QUALITY PROTEIN: uncharacterized protein C9orf78 homolog n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E33C4F)

HSP 1 Score: 62.4 bits (150), Expect = 1.150e-7
Identity = 72/256 (28.12%), Postives = 123/256 (48.05%), Query Frame = 0
Query:   45 KKRSLERNKGGVD-EDEGISKTDLLLLKEAQVMRE-KIRLAALDTGLSGRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKSSN---SACIEDKSHAIFGLSKGSSSDPNTTYCQQGHRQTHQAAQTDIPNTKK--RRFRHATDNLVADRFRKR 293
            +KR  E++  GV+ E+E   +  L  +K  Q +RE K  ++A + G SG  R     + + E +      L L++ FA E +  V + +M  Y+++ + K+ G++      ++ + + E  LYAIPEHLKV +R   +      T G+ EI+LP   + +N IE   A +K+ ++    GR KS     S+   D  H     ++    + +  Y     +      Q+   N  +   R + ATD L+ +RFRKR
Sbjct:    7 RKRIHEQDDVGVESENEEERRMALEEVKFLQKLRERKTGISACNXGTSGLIRSGDKAEGDGEKED-----LVLQDTFAQETAVIVEDPNMLKYVDQELAKRRGKKIDSSEKEDKNPMDE--LYAIPEHLKVRKRNSEESSTQW-TTGIAEIQLPIEFKLRN-IEETEAAKKILQEKRFTGRTKSEPNIPSSYSADYFHRGRDYAEKLRKEHSELYKDHSRKMNETGTQSTEANDMEIVGRRQAATDELMLERFRKR 253          
BLAST of Gchil1648.t1 vs. uniprot
Match: D8QPB9_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPB9_SELML)

HSP 1 Score: 58.5 bits (140), Expect = 3.640e-7
Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   91 GRKRKSYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELP 196
            G  R    ++ EVE +      L L++ FA E + NV + +M  Y+E+ + KK G+QE+GG++ ++    E++LY IP+HLKV +R   +      T G+ E++LP
Sbjct:   30 GLDRVKSSDKVEVEGE---KEELVLQDTFAQETAVNVEDPNMLKYVEQELAKKRGRQESGGTV-DADKPAEDDLYVIPDHLKVRKRNSEESSTQW-TTGIAEVQLP 130          
BLAST of Gchil1648.t1 vs. uniprot
Match: A0A4D9C5A1_SALSN (Uncharacterized protein n=4 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9C5A1_SALSN)

HSP 1 Score: 60.8 bits (146), Expect = 4.320e-7
Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 0
Query:   96 SYPEQAEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQ-ETGGSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVRRKNEIETLRAREKLEEQCNIEGRPKSSNSACIEDKSHAIFGLSKGSSS----DPNTTYCQQGHRQTHQAA--QTDIPNTKKRRFRHATDNLVADRFRKR 293
            S   + E+E D      L L++ FA E +  V + +M  Y+E+ + KK G+  +    ++N+    E+ LY IPEHLKV++    +      T G+ EI+LP   + +N  ET  A++ L+E+ ++ GR K+ +S+     S   F   K  +     D    +  +G ++T   A  Q  + N   RR + ATD L+ DRFRKR
Sbjct:   71 SDKNEGEIEKDD-----LVLQDTFAQETAVMVEDPNMLRYVEQELAKKRGKNIDAENQVENAVQRAEDELYKIPEHLKVKKLNSEEQSTQW-TTGIAEIQLPIEYKLRNIEETEAAKKLLQERRHV-GRTKA-DSSIPASFSADFFQRGKDYAEKLRKDHPEVHKDKGAQETGVEARNQDSVANGAGRR-QAATDELMLDRFRKR 266          
The following BLAST results are available for this feature:
BLAST of Gchil1648.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFN2_9FLOR4.070e-5043.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4X6_CHOCR3.600e-3538.25Protein C9orf78, putative n=1 Tax=Chondrus crispus... [more]
A0A7S0FZ82_9RHOD3.860e-1531.22Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
UPI00053C4E078.420e-932.20uncharacterized protein C9orf78 homolog n=1 Tax=Ta... [more]
A0A0D3C733_BRAOL1.550e-832.70Uncharacterized protein n=6 Tax=Brassiceae TaxID=9... [more]
A0A7J9LS78_GOSSC3.000e-827.80Uncharacterized protein n=13 Tax=Malvoideae TaxID=... [more]
A0A8B8J8J1_PHODC1.120e-731.15protein COP1 SUPPRESSOR 2 n=1 Tax=Phoenix dactylif... [more]
UPI0009E33C4F1.150e-728.13LOW QUALITY PROTEIN: uncharacterized protein C9orf... [more]
D8QPB9_SELML3.640e-734.91Uncharacterized protein (Fragment) n=2 Tax=Selagin... [more]
A0A4D9C5A1_SALSN4.320e-731.22Uncharacterized protein n=4 Tax=Salvia splendens T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010756Telomere length and silencing protein 1PFAMPF07052Hep_59coord: 118..214
e-value: 6.0E-12
score: 46.2
IPR010756Telomere length and silencing protein 1PANTHERPTHR13486TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBERcoord: 51..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1401321..1402211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1648.t1Gchil1648.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1401321..1402211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1648.t1 ID=Gchil1648.t1|Name=Gchil1648.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=297bp
MENSQASAEAQCQGSTNKSLSEFKPLESNATPLFRVRKRSQKARKKRSLE
RNKGGVDEDEGISKTDLLLLKEAQVMREKIRLAALDTGLSGRKRKSYPEQ
AEVENDGNNTAALGLRNNFAVERSNNVMEEHMKNYIEEGIRKKFGQQETG
GSLKNSHDLQEENLYAIPEHLKVEERQQYDPGEGMPTAGVEEIELPEHVR
RKNEIETLRAREKLEEQCNIEGRPKSSNSACIEDKSHAIFGLSKGSSSDP
NTTYCQQGHRQTHQAAQTDIPNTKKRRFRHATDNLVADRFRKRWRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010756Tls1