Gchil1719.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1719.t1
Unique NameGchil1719.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length271
Homology
BLAST of Gchil1719.t1 vs. uniprot
Match: A0A2V3IX89_9FLOR (Ribosome assembly protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX89_9FLOR)

HSP 1 Score: 239 bits (609), Expect = 2.260e-75
Identity = 123/226 (54.42%), Postives = 161/226 (71.24%), Query Frame = 0
Query:   37 SRADVPRAKKEKRSHASPPETSPLDFDFRTEEPHARDAIFHGAASLKLPSGNNMRSMSQEDQHKCIEGVTESCEKLIQILDESVSVFSKNEDGLGVEEQLMSDMARLRNIPIARRYVEMTLWRRIKLFSRQRLAVAEELGYGSGKKKKSDG--FLIHSSDDVDPTFVSYRNAYLKTVIERYQEDLDQIRERESLDAEQVHFLLQCLQSGADLFSNLKCIEDKELKK 260
            S   V  AKK+  S     +   LDFD R  +P A  A+FHG ++L LPSG+ ++SM  E QH   E VT  CEKLIQ++DE+V  FSK  + +  EEQL+SDM RL+N+P+ARRYV+MTLWRR+K +SR+RL  A +LGYGSG +   D    L+HS  D+DP F+SYR+AYLKTVI RY++DL++IRE E LDAEQ  FL++CL+SGADLF NLK +E +E K+
Sbjct:   31 SATGVQNAKKKDLSIKESVQPRVLDFDVRIPQPDASQALFHGMSALDLPSGSVIQSMPPEAQHGYFESVTGVCEKLIQLIDETVRTFSKTSEEVSAEEQLISDMVRLKNVPMARRYVDMTLWRRVKSYSRERLRTARDLGYGSGNRASRDSGALLVHSQGDIDPDFLSYRDAYLKTVIHRYEDDLNKIRESERLDAEQATFLMRCLESGADLFGNLKSLEKEEEKR 256          
BLAST of Gchil1719.t1 vs. uniprot
Match: A0A6P8HNH6_ACTTE (Ribosome assembly protein 3 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HNH6_ACTTE)

HSP 1 Score: 60.5 bits (145), Expect = 1.030e-7
Identity = 33/120 (27.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  134 EQLMSDMARLRNIPIARRYVEMTLWRRIKLFSR---QRLAVAEELGYGSGKKKKSDGFLIHSSDDVDPTFVSYRNAYLKTVIERYQEDLDQIRERESLDAEQVHFLLQCLQSGADLFSNL 250
            + L+ D+    ++PI  RY EM LW++I   ++   + +   EE   GS   +K++       +  +    S+R+ Y++ +   + +DLD++R+  SLD ++V  L+ CL++G D++S++
Sbjct:   38 DYLLKDLTTNPSLPIPERYCEMGLWKQIMQVNQHVWRLMESLEEQDVGSNDCEKTE-------NSAEKPKKSFRDFYMEMITSNFSDDLDKLRKDPSLDHKKVSILIDCLETGKDIWSDV 150          
The following BLAST results are available for this feature:
BLAST of Gchil1719.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX89_9FLOR2.260e-7554.42Ribosome assembly protein 3 n=1 Tax=Gracilariopsis... [more]
A0A6P8HNH6_ACTTE1.030e-727.50Ribosome assembly protein 3 n=1 Tax=Actinia tenebr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
IPR028217Ribosome-assembly protein 3, C-terminalPFAMPF14615Rsa3coord: 204..248
e-value: 2.0E-11
score: 43.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1975778..1976590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1719.t1Gchil1719.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1975778..1976590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1719.t1 ID=Gchil1719.t1|Name=Gchil1719.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=271bp
MTPEETPSGKREPSTEKKGRSGKRADTGRKKKRIKASRADVPRAKKEKRS
HASPPETSPLDFDFRTEEPHARDAIFHGAASLKLPSGNNMRSMSQEDQHK
CIEGVTESCEKLIQILDESVSVFSKNEDGLGVEEQLMSDMARLRNIPIAR
RYVEMTLWRRIKLFSRQRLAVAEELGYGSGKKKKSDGFLIHSSDDVDPTF
VSYRNAYLKTVIERYQEDLDQIRERESLDAEQVHFLLQCLQSGADLFSNL
KCIEDKELKKKRIKPHGKGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028217Rsa3_C