Gchil5752.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5752.t1
Unique Name	Gchil5752.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	258

Homology

[Close]

BLAST of Gchil5752.t1 vs. uniprot
Match: A0A2V3IXK7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK7_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 7.600e-36
Identity = 70/145 (48.28%), Postives = 99/145 (68.28%), Query Frame = 0

Query:  110 GKMRQPRYKLRWDWHLRNFLTALVPPAAMFVFFKLVALLDNPEIQLYETQFEGKDPITGKISTVQSPSKDHPLEQRTEHVQKEELHIFLQKILKDRLKPIEEELERLQSLMAESIRVASESEEKSKRIEKARQHSKKMIRSEVKK 254
            GK+R PRYKLRWDWHLRNFLTAL+PP AM +F+K+V++  +  ++LY+ +FEG DPITGKI    +P      +  TE   +EEL   LQK +++RL+ +E+E+ERL++      +      E S R+E+ARQ SK+M+RS  KK
Sbjct:   59 GKLRHPRYKLRWDWHLRNFLTALIPPGAMLIFYKIVSMFGDSALELYDARFEGMDPITGKIRGPSTPEPGATADLPTEITSREELITLLQKPMQERLRQLEDEIERLKARATAQEQKLEAKAEFSNRVERARQLSKRMVRSGSKK 203

[Close]

BLAST of Gchil5752.t1 vs. uniprot
Match: A0A2V3IRX5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX5_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 5.660e-23
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0

Query:    1 MSLLSRAQPVIQTAQEELPAIQNAVKQLLDVVRAIWKSVVDSGLLQGIIEKIKALFGSASNAMESLPQTVHQVTEARSGGESEGL 85
            MS LSRAQPVI+TA+EELP IQ A+K L DV +++WKSV++SGLL  I EKI+AL GSA++A+ESLPQTV + +       S GL
Sbjct:    1 MSFLSRAQPVIETAREELPVIQQALKSLFDVAKSLWKSVIESGLLGAIFEKIRALLGSATSAVESLPQTVQETSSRAVDSSSSGL 85

The following BLAST results are available for this feature:

BLAST of Gchil5752.t1 vs. uniprot

BLAST of Gchil5752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IXK7_9FLOR	7.600e-36	48.28	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IRX5_9FLOR	5.660e-23	60.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 213..233
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..257
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..127
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 149..257
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..148

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000015_pilon	contig	tig00000015_pilon:1377156..1378683 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5752.t1	Gchil5752.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000015_pilon 1377156..1378683 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5752.t1 ID=Gchil5752.t1|Name=Gchil5752.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=258bp
MSLLSRAQPVIQTAQEELPAIQNAVKQLLDVVRAIWKSVVDSGLLQGIIE
KIKALFGSASNAMESLPQTVHQVTEARSGGESEGLGGFVGDVVDKVQDKA
NAAQNMLKGGKMRQPRYKLRWDWHLRNFLTALVPPAAMFVFFKLVALLDN
PEIQLYETQFEGKDPITGKISTVQSPSKDHPLEQRTEHVQKEELHIFLQK
ILKDRLKPIEEELERLQSLMAESIRVASESEEKSKRIEKARQHSKKMIRS
EVKKNAD*