Gchil7815.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7815.t1
Unique NameGchil7815.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length464
Homology
BLAST of Gchil7815.t1 vs. uniprot
Match: A0A2V3ISX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX8_9FLOR)

HSP 1 Score: 529 bits (1362), Expect = 1.580e-183
Identity = 276/453 (60.93%), Postives = 340/453 (75.06%), Query Frame = 0
Query:    1 MIRNNKLSYISVDRPWHSFEIQDTFLSSLVTSVFVTLISYQVAAILFSITLGLKKRNETKLNTFGIALLTRYLSSPLAVMNSVSRLDWLTRLYYWGDIPSDTRISRDSARVKFRTSAVLLLLLVATPFTDTFLVGLVLARTNELTFEQAGFSGIGLGVEEELSVVETIPYLSLCRMARFEERTGDSVRAVFQLCDTPNLAEGVASNISGLDISLERQTHVYVRVIFRGSAVFGAKWTQLSGVGVEKNLKASISKNSVVPLVDLALDRFALHCGERTIIERLGTQQNRTFGGNNVVIASVRVACNNRTIKEQDGPIYATEIIGMLKQKLTFIKTERTLVRNITDPGDEFTEEPNGVLLQRTKRNSSMFTLIAVCGALILVRMTLGVLVANDVEDGLERLFLNRLGIAARSSTVWSAAERISFRRKYQDGDSCQLGMEREEMAEVERFHGGVVGK 453
            MIRNNKLSY SV+R W+ F+I  T LSSLVTSV VTLISYQVA+ILF+ITLG+KKR+ETKL  FGI LLTRYLSSPLAV+NS+ R+DWLTRLYY GDIP DT ISRD A V  RT++VL LL++A P  DT LV L L+RTNELTFE+AGF G+ LGV+  L+VVETIPY+SLC +A+FEER  D VR  FQLC++P+L E    N++G++ISLE Q  V VRVI +G  +   K+ Q++G  VE ++ A+++  SV PLVD+ALD FA HCGER  +  L  +QN  FG N V++ASVRVAC N TI E++   +AT+I+  LK+K+TFI+ E TLVRN +D G  F E  N VLLQRT+RNSSMF LI V   L+LVR TLG + ANDVE GLE L L+RLG   R +T+W   ER+ FR+KYQ G+ CQLG+E EE AEVE F GGVVG+
Sbjct:    1 MIRNNKLSYASVEREWYLFDISQTSLSSLVTSVLVTLISYQVASILFTITLGMKKRHETKLKNFGIVLLTRYLSSPLAVLNSILRVDWLTRLYYRGDIPRDTHISRDPASVHVRTASVLFLLVIAPPMIDTMLVALSLSRTNELTFEEAGFRGVLLGVDRGLNVVETIPYVSLCNLAKFEERPEDLVRVAFQLCESPSLPEDAPENVTGVEISLENQVQVVVRVILQGYVLLSQKYAQVNGNDVEMHVMAAVTNRSVAPLVDIALDGFAKHCGERNTLGPLPPKQNDVFGTNKVLLASVRVACGNVTISEEERRTHATQIVESLKEKVTFIEAESTLVRNASDLGSNFVENKNDVLLQRTERNSSMFMLIVVAVILLLVRATLGTIFANDVEKGLEVLILDRLGCGERHTTMWKDVERVRFRKKYQYGERCQLGLELEETAEVESFRGGVVGE 453          
BLAST of Gchil7815.t1 vs. uniprot
Match: A0A2V3ISA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA6_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 4.580e-13
Identity = 112/447 (25.06%), Postives = 184/447 (41.16%), Query Frame = 0
Query:    1 MIRNNKLSYISVDRPWHSFEIQDTFLSSLVTSVFVTLISYQVAAILFSITLGLKKRN---ETKLNTFGIALLTRYLSSPLAVMNSVSRLDWLTRLYYWGDIPSDTRISRDSARVKFRTSAVLLLLLVATPFTDTFLVGLVLARTNELTFEQAGFSGIGLGVEEELSVVETIPYLSLCRMARFEERTGDSVRAV--FQLCDTPNLAEGVASNI----SGLDISLERQTHVYVRVIFRGSAVFGAKWTQLSGVGVEKNLKASISKNSVVPLVDLALDRFALH---CGERTIIERLGTQQNR-----------TFGGNNVVIASVRVACNNRTIKEQDGPIYATEIIGMLKQKLTFIKTERTLVRNITDPGD------------EFTEEPNGVLLQRTKRNSSMFTLIAVCGALILVRMTLGVLVANDVEDGLERLFLNRLGIAARSSTV 412
            MI  + L+Y +    + ++   D  L++L+ SV  T+I  Q+ +I+ S+ LG K RN      L T  +A    + SSP AV  ++S +         G  PS T             +  L+ L+VA P  +   V L + R  E TF  AGF GI LG+    SV++T P  S C     +   G   +A   F LC+T       AS +       D++     HV +R      A+ G K       G   +   ++++ ++  L  L+ + +       G R   ER G +              TF  +N +  + R  C  + + E    +  T  I  +  K++F+  ER+ V    +P D            E     + VL +R    +S+  L+ +   ++L R+ L  LVANDV   +  +  + LG+    S +
Sbjct:    1 MIEGSTLTYANQPSAFVTWRPADNNLNTLLVSVITTIIVSQLFSIVHSVVLGCKMRNIIARCDLYTQLVA----WRSSPSAVSQAISGVQD-------GQYPSPT----------IPQAMKLIALVVAAPLINAVFVALSIEREQEFTFRTAGFGGIALGLRLNNSVLKTKPLSSGCEQVPLDVAHGSDQKAEAKFVLCETRTQLRADASEVLFVLEVFDLARIAGFHVIIRTW--AGAIHGTK------KGEVVSSSKTLNRANLFALHYLSSEEYLREWAFSGLRVAQERCGDEFKAFETFEKPGLFSTFKVDNYL--TFRAVCARQNVHEMQKLMGDT--INKMLAKVSFVNAERSFVSVPDEPIDLLGGIVGLAIRNETRTLDDVVLFRRRAPIASVGVLLVILLVVVLFRIVLSALVANDVAVAIGSVVRHELGLPCADSML 414          
The following BLAST results are available for this feature:
BLAST of Gchil7815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISX8_9FLOR1.580e-18360.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISA6_9FLOR4.580e-1325.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..416
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 417..463
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 388..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..365
NoneNo IPR availableTMHMMTMhelixcoord: 366..388
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004401_piloncontigtig00004401_pilon:395486..396877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7815.t1Gchil7815.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004401_pilon 395486..396877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7815.t1 ID=Gchil7815.t1|Name=Gchil7815.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=464bp
MIRNNKLSYISVDRPWHSFEIQDTFLSSLVTSVFVTLISYQVAAILFSIT
LGLKKRNETKLNTFGIALLTRYLSSPLAVMNSVSRLDWLTRLYYWGDIPS
DTRISRDSARVKFRTSAVLLLLLVATPFTDTFLVGLVLARTNELTFEQAG
FSGIGLGVEEELSVVETIPYLSLCRMARFEERTGDSVRAVFQLCDTPNLA
EGVASNISGLDISLERQTHVYVRVIFRGSAVFGAKWTQLSGVGVEKNLKA
SISKNSVVPLVDLALDRFALHCGERTIIERLGTQQNRTFGGNNVVIASVR
VACNNRTIKEQDGPIYATEIIGMLKQKLTFIKTERTLVRNITDPGDEFTE
EPNGVLLQRTKRNSSMFTLIAVCGALILVRMTLGVLVANDVEDGLERLFL
NRLGIAARSSTVWSAAERISFRRKYQDGDSCQLGMEREEMAEVERFHGGV
VGKSFKDTIEENS*
back to top