Gchil7816.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7816.t1
Unique Name	Gchil7816.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	448

Homology

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BLAST of Gchil7816.t1 vs. uniprot
Match: A0A2V3ISW2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISW2_9FLOR)

HSP 1 Score: 498 bits (1283), Expect = 6.840e-172
Identity = 253/446 (56.73%), Postives = 326/446 (73.09%), Query Frame = 0

Query:    1 MIRNDHLTYAGAESVFRNWRPQDDSIYEMVFSALITVFVYQLAKLVLELCLGQKRSGEIPVSDLYLYVVLSGLSFSLVVSSFRSIIQLAQE--AEDLSLSTAMKSKQSRRTAWTVGKFALLLLAIPSIQVVGLFFGVEGETDISFKDVNFGGLALGLVKDVPTITQNNTSRCQKLETRLGHGETERTNFFRCYGISEPLPFETGANLGAGSFLVFLMSTSTNIGLTVVVPGKRWISFLSLDINDGKNPYSLRNVLSLEQKSRILEVGVQKMVKSCPSAVQTKGVDVSWVFPSLTESESEQPRLSVLVECADYDENHLVDVAFGMLNNVSFIHTDHFDVSESINAEEFVSGDDLVFFRRRGSNASLLAMLIATVVVITGRIIVGLVLYNEGPKALEVILKDGLAVKCCDSLLQYEQIVHYTSEREKSNGGNSCFWSDTETCSSGHTD 444
            MIR+++LTYAGA+S FRNWRP+ D  +E+VF+ L+TVFVYQL KL+LE+ LGQKR GEI +SDLY+Y+V+SGLSFS VVS+ RS+ +  Q+   E+ S S  + S +S RTA  + KF LL+L+IP I ++G+F  +E ETD+SFKDVNFGGLA+GL +D   I  N  S C K+ TR GHGET  ++FFRCY ++ P+PF+   NL AG F+  L S+S NIG+T+V PGKRWISFL+L++NDGK  Y L+N LS +Q+SRI E GV+++V  C S++QT+G+D+SWV P   E+E +Q  L VLVEC  YDE HL  V   MLNNVSF+ T+ F+VSES  +EEFV  DDL+FFRRRGSNASLLAMLI TV+VI  R++VG VL  EGP ALEVI+KD   +KCCDS+LQYEQ V+Y      +         D ETCSS  T+
Sbjct:    1 MIRDEYLTYAGAQSAFRNWRPESDIFFELVFAVLVTVFVYQLTKLLLEVSLGQKRKGEIVISDLYVYMVVSGLSFSAVVSNIRSLFRGKQDDSQEERSPSYGLLSSKSARTARVLAKFVLLVLSIPGIHILGIFLSIETETDLSFKDVNFGGLAMGLREDRSNIKMNRASSCPKVLTRFGHGETGTSDFFRCYTMTPPIPFDNEDNLQAGRFIAILRSSSNNIGVTIVTPGKRWISFLTLNVNDGKQTYLLKNTLSSDQRSRIFESGVRELVAPCNSSLQTRGIDISWVIPPSLENEPKQDILRVLVECPGYDETHLAQVGNDMLNNVSFVQTERFEVSESFVSEEFVPADDLIFFRRRGSNASLLAMLIITVIVILARVLVGFVLSIEGPFALEVIIKDRFGLKCCDSMLQYEQKVNYGKHSVDTIPKIYAPSDDVETCSSSQTE 446

The following BLAST results are available for this feature:

BLAST of Gchil7816.t1 vs. uniprot

BLAST of Gchil7816.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISW2_9FLOR	6.840e-172	56.73	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 363..385
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..63
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 136..362
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 386..447
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..86
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 87..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..135
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..43
None	No IPR available	TMHMM	TMhelix		coord: 64..86
None	No IPR available	TMHMM	TMhelix		coord: 205..227
None	No IPR available	TMHMM	TMhelix		coord: 111..133
None	No IPR available	TMHMM	TMhelix		coord: 27..49
None	No IPR available	TMHMM	TMhelix		coord: 363..385

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004401_pilon	contig	tig00004401_pilon:400203..401546 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7816.t1	Gchil7816.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004401_pilon 400203..401546 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7816.t1 ID=Gchil7816.t1|Name=Gchil7816.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=448bp
MIRNDHLTYAGAESVFRNWRPQDDSIYEMVFSALITVFVYQLAKLVLELC
LGQKRSGEIPVSDLYLYVVLSGLSFSLVVSSFRSIIQLAQEAEDLSLSTA
MKSKQSRRTAWTVGKFALLLLAIPSIQVVGLFFGVEGETDISFKDVNFGG
LALGLVKDVPTITQNNTSRCQKLETRLGHGETERTNFFRCYGISEPLPFE
TGANLGAGSFLVFLMSTSTNIGLTVVVPGKRWISFLSLDINDGKNPYSLR
NVLSLEQKSRILEVGVQKMVKSCPSAVQTKGVDVSWVFPSLTESESEQPR
LSVLVECADYDENHLVDVAFGMLNNVSFIHTDHFDVSESINAEEFVSGDD
LVFFRRRGSNASLLAMLIATVVVITGRIIVGLVLYNEGPKALEVILKDGL
AVKCCDSLLQYEQIVHYTSEREKSNGGNSCFWSDTETCSSGHTDSGR*