Gchil5779.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5779.t1
Unique NameGchil5779.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length90
Homology
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BLAST of Gchil5779.t1 vs. uniprot
Match: A0A2V3IU46_9FLOR (Programmed cell death protein 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU46_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 3.330e-12
Identity = 42/89 (47.19%), Postives = 49/89 (55.06%), Query Frame = 0 
Query:    1 MDQDAQLEQWRAQRLAQLRAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEQRRLILNQILTPEAREKLANIRLVKPQRAQQ 89
            M  D +L QWRAQRLAQ+R  A                                  Q+QRR+ILNQI+TPEAREKLANIRLVKP+RA+Q
Sbjct:    1 MADDPELAQWRAQRLAQMRGAAGGAQGPSAEELEMRRKQEEAK-------------QDQRRMILNQIMTPEAREKLANIRLVKPERAEQ 76
The following BLAST results are available for this feature:
BLAST of Gchil5779.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU46_9FLOR3.330e-1247.19Programmed cell death protein 5 n=1 Tax=Gracilario... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
IPR036883PDCD5-like superfamilyGENE3D1.10.8.140coord: 3..89
e-value: 5.5E-15
score: 57.3
IPR036883PDCD5-like superfamilySUPERFAMILY46950Double-stranded DNA-binding domaincoord: 48..89
IPR002836PDCD5-likePIRSFPIRSF015730TFAR19coord: 1..89
e-value: 3.4E-12
score: 44.4
IPR002836PDCD5-likePFAMPF01984dsDNA_bindcoord: 11..89
e-value: 1.4E-13
score: 51.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1562594..1563072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5779.t1Gchil5779.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1562594..1563072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5779.t1 ID=Gchil5779.t1|Name=Gchil5779.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=90bp
MDQDAQLEQWRAQRLAQLRAGAGAGAGASTPDSGAAAEAPASQQELEMRR
KQQEAQQEQRRLILNQILTPEAREKLANIRLVKPQRAQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036883PDCD5-like_sf
IPR002836PDCD5-like